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reference-preprocessing
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ABIDE_fs-6.0.0
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ABIDE_fs-6.0.0
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0051320
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051320 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-120
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051320
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 16848.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 273738.751499, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 274238.103116, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 547976.854615, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1680750.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1606986.687007, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 00:43:31 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:24:59 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:24:59 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      1927     1920.2  wm-lh-bankssts                    90.6834     9.4375    63.0000   119.0000    56.0000 
    66. 

  66.   2 3002      2820     2784.2  wm-lh-caudalanteriorcingulate    100.9493     9.4196    48.0000   126.0000    78.0000 
    67. 

  67.   3 3003      5562     5585.0  wm-lh-caudalmiddlefrontal         94.4105     9.1028    59.0000   121.0000    62.0000 
    68. 

  68.   4 3005      2999     3054.4  wm-lh-cuneus                      90.0890     9.5888    55.0000   123.0000    68.0000 
    69. 

  69.   5 3006       718      777.5  wm-lh-entorhinal                  73.1128     8.4974    47.0000   103.0000    56.0000 
    70. 

  70.   6 3007      7162     7228.1  wm-lh-fusiform                    86.9589    10.0287    53.0000   118.0000    65.0000 
    71. 

  71.   7 3008     12144    12373.8  wm-lh-inferiorparietal            92.7054     9.7893     4.0000   124.0000   120.0000 
    72. 

  72.   8 3009      7208     7479.1  wm-lh-inferiortemporal            84.8692    10.2582    51.0000   117.0000    66.0000 
    73. 

  73.   9 3010      4632     4644.8  wm-lh-isthmuscingulate           102.7137    10.3952    25.0000   136.0000   111.0000 
    74. 

  74.  10 3011      9464     9702.9  wm-lh-lateraloccipital            83.5075     9.5206    53.0000   123.0000    70.0000 
    75. 

  75.  11 3012      8167     8164.5  wm-lh-lateralorbitofrontal        95.6449    10.2351    58.0000   126.0000    68.0000 
    76. 

  76.  12 3013      5847     6016.9  wm-lh-lingual                     86.5560    13.0851     2.0000   122.0000   120.0000 
    77. 

  77.  13 3014      4068     4083.3  wm-lh-medialorbitofrontal         96.6822    11.6890    44.0000   126.0000    82.0000 
    78. 

  78.  14 3015      6542     6728.0  wm-lh-middletemporal              87.2592    10.1222    56.0000   119.0000    63.0000 
    79. 

  79.  15 3016      1674     1773.7  wm-lh-parahippocampal             89.6702     9.5380    49.0000   116.0000    67.0000 
    80. 

  80.  16 3017      4290     4304.5  wm-lh-paracentral                 92.6072     9.4741    45.0000   122.0000    77.0000 
    81. 

  81.  17 3018      5021     5041.5  wm-lh-parsopercularis             94.6272     8.7765    58.0000   122.0000    64.0000 
    82. 

  82.  18 3019      1695     1709.9  wm-lh-parsorbitalis               89.2425     9.6319    68.0000   117.0000    49.0000 
    83. 

  83.  19 3020      4331     4321.6  wm-lh-parstriangularis            93.2840     9.1120    59.0000   123.0000    64.0000 
    84. 

  84.  20 3021      3549     3533.2  wm-lh-pericalcarine               80.3576    16.8525     1.0000   117.0000   116.0000 
    85. 

  85.  21 3022      7427     7748.8  wm-lh-postcentral                 91.8706     9.3159    62.0000   127.0000    65.0000 
    86. 

  86.  22 3023      4041     4020.7  wm-lh-posteriorcingulate         101.3658     9.2334    54.0000   130.0000    76.0000 
    87. 

  87.  23 3024     15486    15620.3  wm-lh-precentral                  93.0905     9.1829    49.0000   125.0000    76.0000 
    88. 

  88.  24 3025     11858    11941.5  wm-lh-precuneus                   99.1230     9.1597    51.0000   130.0000    79.0000 
    89. 

  89.  25 3026      2939     2855.7  wm-lh-rostralanteriorcingulate    98.1997    12.7743    36.0000   135.0000    99.0000 
    90. 

  90.  26 3027     15695    15856.4  wm-lh-rostralmiddlefrontal        96.0319     9.3676    65.0000   127.0000    62.0000 
    91. 

  91.  27 3028     19525    19891.0  wm-lh-superiorfrontal             93.1440     9.7386    47.0000   128.0000    81.0000 
    92. 

  92.  28 3029     12833    13071.7  wm-lh-superiorparietal            94.0284     9.2461    44.0000   124.0000    80.0000 
    93. 

  93.  29 3030     10449    10704.6  wm-lh-superiortemporal            90.7119    10.4655    48.0000   121.0000    73.0000 
    94. 

  94.  30 3031     11476    11629.5  wm-lh-supramarginal               95.2495     9.9616    22.0000   132.0000   110.0000 
    95. 

  95.  31 3032       300      298.9  wm-lh-frontalpole                 94.9700     7.7232    79.0000   114.0000    35.0000 
    96. 

  96.  32 3033       632      690.1  wm-lh-temporalpole                71.3418     7.2100    52.0000    99.0000    47.0000 
    97. 

  97.  33 3034       935      931.9  wm-lh-transversetemporal          95.9005     8.3774    71.0000   119.0000    48.0000 
    98. 

  98.  34 3035     11338    11264.1  wm-lh-insula                      91.0399    11.9829    17.0000   128.0000   111.0000 
    99. 

  99.  35 4001      2992     2989.4  wm-rh-bankssts                    92.6872     7.2779    68.0000   114.0000    46.0000 
    100. 

  100.  36 4002      3201     3194.1  wm-rh-caudalanteriorcingulate    101.2987     9.6643    68.0000   132.0000    64.0000 
    101. 

  101.  37 4003      6111     6208.6  wm-rh-caudalmiddlefrontal         94.1085     8.7035    67.0000   122.0000    55.0000 
    102. 

  102.  38 4005      2739     2789.0  wm-rh-cuneus                      93.6039     8.4521    50.0000   117.0000    67.0000 
    103. 

  103.  39 4006       728      774.5  wm-rh-entorhinal                  76.1305     9.4251    48.0000   109.0000    61.0000 
    104. 

  104.  40 4007      8640     8647.8  wm-rh-fusiform                    86.8091     8.6905    40.0000   112.0000    72.0000 
    105. 

  105.  41 4008     12583    12727.1  wm-rh-inferiorparietal            94.4017     8.5511    26.0000   118.0000    92.0000 
    106. 

  106.  42 4009      7547     7743.7  wm-rh-inferiortemporal            83.1247     9.1384    54.0000   110.0000    56.0000 
    107. 

  107.  43 4010      3497     3489.9  wm-rh-isthmuscingulate           100.7341     9.7105    27.0000   127.0000   100.0000 
    108. 

  108.  44 4011     11641    11872.9  wm-rh-lateraloccipital            88.0317     8.8164    58.0000   115.0000    57.0000 
    109. 

  109.  45 4012      8463     8539.7  wm-rh-lateralorbitofrontal        90.9531    10.4933    49.0000   123.0000    74.0000 
    110. 

  110.  46 4013      5557     5649.9  wm-rh-lingual                     89.1690     9.6012     8.0000   118.0000   110.0000 
    111. 

  111.  47 4014      4897     4977.4  wm-rh-medialorbitofrontal         98.3768     9.8879    58.0000   128.0000    70.0000 
    112. 

  112.  48 4015      7695     7806.6  wm-rh-middletemporal              85.2838     9.1774    52.0000   111.0000    59.0000 
    113. 

  113.  49 4016      1684     1730.1  wm-rh-parahippocampal             87.9181     8.1925    61.0000   113.0000    52.0000 
    114. 

  114.  50 4017      4960     5004.3  wm-rh-paracentral                 93.4431     9.1094    50.0000   122.0000    72.0000 
    115. 

  115.  51 4018      4111     4136.6  wm-rh-parsopercularis             92.2734     8.9223    67.0000   123.0000    56.0000 
    116. 

  116.  52 4019      1424     1434.3  wm-rh-parsorbitalis               86.3912     9.0609    59.0000   112.0000    53.0000 
    117. 

  117.  53 4020      3618     3692.4  wm-rh-parstriangularis            86.7543     8.4681    64.0000   113.0000    49.0000 
    118. 

  118.  54 4021      4045     3902.6  wm-rh-pericalcarine               85.2630    13.4492     4.0000   114.0000   110.0000 
    119. 

  119.  55 4022      7420     7706.0  wm-rh-postcentral                 91.3309     8.2468    60.0000   121.0000    61.0000 
    120. 

  120.  56 4023      5104     5104.0  wm-rh-posteriorcingulate         100.8331     8.8103    62.0000   127.0000    65.0000 
    121. 

  121.  57 4024     15348    15485.4  wm-rh-precentral                  91.6320     8.7257    44.0000   122.0000    78.0000 
    122. 

  122.  58 4025     11454    11466.8  wm-rh-precuneus                   98.5843     8.7992    12.0000   129.0000   117.0000 
    123. 

  123.  59 4026      2133     2118.8  wm-rh-rostralanteriorcingulate   100.0389    10.0915    67.0000   134.0000    67.0000 
    124. 

  124.  60 4027     16493    16803.4  wm-rh-rostralmiddlefrontal        94.0412     8.9921    58.0000   125.0000    67.0000 
    125. 

  125.  61 4028     18763    19046.0  wm-rh-superiorfrontal             93.9341     9.5956    52.0000   125.0000    73.0000 
    126. 

  126.  62 4029     13805    14070.0  wm-rh-superiorparietal            95.2650     8.7455    38.0000   122.0000    84.0000 
    127. 

  127.  63 4030      7784     8015.8  wm-rh-superiortemporal            86.7095     9.4203    56.0000   118.0000    62.0000 
    128. 

  128.  64 4031     10239    10444.2  wm-rh-supramarginal               95.3332     8.3649    62.0000   121.0000    59.0000 
    129. 

  129.  65 4032       449      458.8  wm-rh-frontalpole                 97.2116     8.8230    77.0000   122.0000    45.0000 
    130. 

  130.  66 4033       769      784.5  wm-rh-temporalpole                70.9883     7.4219    47.0000    94.0000    47.0000 
    131. 

  131.  67 4034       569      560.3  wm-rh-transversetemporal          91.0703     7.3813    73.0000   112.0000    39.0000 
    132. 

  132.  68 4035     10609    10534.1  wm-rh-insula                      87.9717    11.1751    13.0000   123.0000   110.0000 
    133. 

  133.  69 5001     48068    47622.9  Left-UnsegmentedWhiteMatter       97.6015    12.6718     0.0000   132.0000   132.0000 
    134. 

  134.  70 5002     45098    44815.6  Right-UnsegmentedWhiteMatter      97.1734     9.6298    13.0000   126.0000   113.0000 
    135.