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0051275
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051275 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-376
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051275
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 8000.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 197144.975200, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 198789.340649, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 395934.315849, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1441062.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1393134.925004, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 05:26:14 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 22:17:14 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 22:17:14 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2046     2042.5  wm-lh-bankssts                    96.1789     9.3212    66.0000   118.0000    52.0000 
    66. 

  66.   2 3002      2411     2380.8  wm-lh-caudalanteriorcingulate    103.4861     8.7074    65.0000   127.0000    62.0000 
    67. 

  67.   3 3003      6875     6898.8  wm-lh-caudalmiddlefrontal         99.8653    10.0234    62.0000   126.0000    64.0000 
    68. 

  68.   4 3005      3451     3447.9  wm-lh-cuneus                      98.5752    10.0023    66.0000   121.0000    55.0000 
    69. 

  69.   5 3006       692      722.3  wm-lh-entorhinal                  77.6676     9.4761    53.0000   112.0000    59.0000 
    70. 

  70.   6 3007      5270     5267.1  wm-lh-fusiform                    87.6010    10.6899    54.0000   113.0000    59.0000 
    71. 

  71.   7 3008      7394     7460.4  wm-lh-inferiorparietal            97.7897     9.9385    65.0000   121.0000    56.0000 
    72. 

  72.   8 3009      4891     4889.3  wm-lh-inferiortemporal            88.7393    10.0732    60.0000   119.0000    59.0000 
    73. 

  73.   9 3010      3692     3698.8  wm-lh-isthmuscingulate            98.6389    10.6521    15.0000   122.0000   107.0000 
    74. 

  74.  10 3011      8440     8658.2  wm-lh-lateraloccipital            95.1128     9.8548    61.0000   125.0000    64.0000 
    75. 

  75.  11 3012      5806     5822.1  wm-lh-lateralorbitofrontal        96.1099    11.2513    60.0000   124.0000    64.0000 
    76. 

  76.  12 3013      6068     5961.8  wm-lh-lingual                     89.8296    11.0765    33.0000   121.0000    88.0000 
    77. 

  77.  13 3014      2448     2436.4  wm-lh-medialorbitofrontal         94.2447    11.6905    58.0000   121.0000    63.0000 
    78. 

  78.  14 3015      3395     3596.1  wm-lh-middletemporal              88.3411    10.3587    60.0000   115.0000    55.0000 
    79. 

  79.  15 3016      1222     1228.2  wm-lh-parahippocampal             86.7185     9.3540    63.0000   114.0000    51.0000 
    80. 

  80.  16 3017      4363     4365.8  wm-lh-paracentral                 98.0944     7.5227    72.0000   116.0000    44.0000 
    81. 

  81.  17 3018      3885     3910.2  wm-lh-parsopercularis            101.6479    10.5916    70.0000   125.0000    55.0000 
    82. 

  82.  18 3019       780      799.5  wm-lh-parsorbitalis               90.6256     9.5201    66.0000   117.0000    51.0000 
    83. 

  83.  19 3020      2813     2830.3  wm-lh-parstriangularis           100.7999     9.8136    72.0000   123.0000    51.0000 
    84. 

  84.  20 3021      4537     4396.1  wm-lh-pericalcarine               96.9048    10.3157    50.0000   121.0000    71.0000 
    85. 

  85.  21 3022      6077     6202.0  wm-lh-postcentral                 95.2059     9.6424    68.0000   124.0000    56.0000 
    86. 

  86.  22 3023      4303     4218.8  wm-lh-posteriorcingulate          98.7174     9.4661    45.0000   122.0000    77.0000 
    87. 

  87.  23 3024     11849    11838.8  wm-lh-precentral                  98.0231     9.1695    66.0000   127.0000    61.0000 
    88. 

  88.  24 3025      7771     7680.9  wm-lh-precuneus                   97.6006    12.6872    27.0000   127.0000   100.0000 
    89. 

  89.  25 3026      2717     2624.4  wm-lh-rostralanteriorcingulate    99.5985    15.7759    25.0000   132.0000   107.0000 
    90. 

  90.  26 3027      9520     9662.5  wm-lh-rostralmiddlefrontal        99.4579    10.2645    65.0000   127.0000    62.0000 
    91. 

  91.  27 3028     15746    15619.0  wm-lh-superiorfrontal             94.9103    10.3060    59.0000   120.0000    61.0000 
    92. 

  92.  28 3029     10637    10717.2  wm-lh-superiorparietal           100.2411     8.9861    65.0000   124.0000    59.0000 
    93. 

  93.  29 3030      7931     8115.4  wm-lh-superiortemporal            93.8428     9.7597    59.0000   122.0000    63.0000 
    94. 

  94.  30 3031      7582     7586.9  wm-lh-supramarginal               97.6661    10.5428    64.0000   124.0000    60.0000 
    95. 

  95.  31 3032       170      182.2  wm-lh-frontalpole                 87.8647     8.2181    66.0000   109.0000    43.0000 
    96. 

  96.  32 3033       480      507.0  wm-lh-temporalpole                76.0479     8.6844    58.0000    99.0000    41.0000 
    97. 

  97.  33 3034       640      644.3  wm-lh-transversetemporal          92.4906     7.9143    68.0000   115.0000    47.0000 
    98. 

  98.  34 3035      8578     8480.6  wm-lh-insula                      91.4866    12.7800    30.0000   127.0000    97.0000 
    99. 

  99.  35 4001      1363     1364.0  wm-rh-bankssts                   100.5121     8.9329    73.0000   123.0000    50.0000 
    100. 

  100.  36 4002      2675     2639.0  wm-rh-caudalanteriorcingulate    101.3895    10.1392    57.0000   128.0000    71.0000 
    101. 

  101.  37 4003      5969     5979.3  wm-rh-caudalmiddlefrontal         94.8323    10.1079    63.0000   120.0000    57.0000 
    102. 

  102.  38 4005      3376     3401.8  wm-rh-cuneus                      93.3552     9.1740    66.0000   115.0000    49.0000 
    103. 

  103.  39 4006       702      754.1  wm-rh-entorhinal                  77.7664     9.0173    56.0000   103.0000    47.0000 
    104. 

  104.  40 4007      5112     5078.6  wm-rh-fusiform                    88.4167    10.4042    33.0000   115.0000    82.0000 
    105. 

  105.  41 4008      9541     9588.9  wm-rh-inferiorparietal            98.7775     9.1417    65.0000   124.0000    59.0000 
    106. 

  106.  42 4009      4796     4778.2  wm-rh-inferiortemporal            90.3284    11.7175    51.0000   119.0000    68.0000 
    107. 

  107.  43 4010      3145     3116.5  wm-rh-isthmuscingulate            96.1809     9.3040    27.0000   126.0000    99.0000 
    108. 

  108.  44 4011      8362     8598.9  wm-rh-lateraloccipital            90.8496     9.1955    55.0000   117.0000    62.0000 
    109. 

  109.  45 4012      5908     5817.5  wm-rh-lateralorbitofrontal        92.2057    13.1832    47.0000   119.0000    72.0000 
    110. 

  110.  46 4013      6851     6798.4  wm-rh-lingual                     88.9298    10.9434    30.0000   119.0000    89.0000 
    111. 

  111.  47 4014      3325     3411.8  wm-rh-medialorbitofrontal         97.4758    12.1752    51.0000   123.0000    72.0000 
    112. 

  112.  48 4015      4558     4740.4  wm-rh-middletemporal              91.7170    11.6000    58.0000   120.0000    62.0000 
    113. 

  113.  49 4016      1056     1084.5  wm-rh-parahippocampal             86.4555     8.8516    61.0000   107.0000    46.0000 
    114. 

  114.  50 4017      4620     4588.3  wm-rh-paracentral                 96.9639     7.6041    67.0000   116.0000    49.0000 
    115. 

  115.  51 4018      2514     2461.8  wm-rh-parsopercularis             92.8365    10.3599    63.0000   116.0000    53.0000 
    116. 

  116.  52 4019      1211     1209.5  wm-rh-parsorbitalis               91.9100    11.7837    62.0000   120.0000    58.0000 
    117. 

  117.  53 4020      2685     2696.8  wm-rh-parstriangularis            94.8205    10.3826    65.0000   119.0000    54.0000 
    118. 

  118.  54 4021      4599     4447.5  wm-rh-pericalcarine               90.6734     9.7439    63.0000   116.0000    53.0000 
    119. 

  119.  55 4022      6255     6376.0  wm-rh-postcentral                 94.6555     9.0787    68.0000   120.0000    52.0000 
    120. 

  120.  56 4023      4149     4083.5  wm-rh-posteriorcingulate          96.6527     9.2232    40.0000   116.0000    76.0000 
    121. 

  121.  57 4024     12871    12896.2  wm-rh-precentral                  95.4561     9.0635    63.0000   119.0000    56.0000 
    122. 

  122.  58 4025      7642     7548.4  wm-rh-precuneus                   96.0771     9.0882    67.0000   119.0000    52.0000 
    123. 

  123.  59 4026      1576     1541.2  wm-rh-rostralanteriorcingulate   101.3420    12.8610    68.0000   128.0000    60.0000 
    124. 

  124.  60 4027     10534    10737.6  wm-rh-rostralmiddlefrontal        99.5489     9.9379    65.0000   125.0000    60.0000 
    125. 

  125.  61 4028     16125    16164.3  wm-rh-superiorfrontal             95.6926    10.3339    57.0000   123.0000    66.0000 
    126. 

  126.  62 4029     10608    10810.1  wm-rh-superiorparietal            98.7100     8.5677    69.0000   123.0000    54.0000 
    127. 

  127.  63 4030      5967     6082.4  wm-rh-superiortemporal            91.3875    10.7644    58.0000   121.0000    63.0000 
    128. 

  128.  64 4031      8999     9005.6  wm-rh-supramarginal              100.9572     8.9833    68.0000   126.0000    58.0000 
    129. 

  129.  65 4032       255      245.5  wm-rh-frontalpole                 93.4392    10.0206    72.0000   116.0000    44.0000 
    130. 

  130.  66 4033       469      489.7  wm-rh-temporalpole                75.8593     8.6741    56.0000   106.0000    50.0000 
    131. 

  131.  67 4034       437      428.7  wm-rh-transversetemporal          90.9176     6.7043    74.0000   108.0000    34.0000 
    132. 

  132.  68 4035      8377     8371.1  wm-rh-insula                      89.6453    12.0318    39.0000   117.0000    78.0000 
    133. 

  133.  69 5001     21990    21813.1  Left-UnsegmentedWhiteMatter       99.5015    11.1315     7.0000   125.0000   118.0000 
    134. 

  134.  70 5002     20402    20285.7  Right-UnsegmentedWhiteMatter      97.8229    10.2789    10.0000   127.0000   117.0000 
    135.