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ABIDE_fs-6.0.0
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0051257
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051257 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-387
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051257
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 14545.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 175244.825032, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 175102.919235, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 350347.744268, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1383518.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1303790.268316, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 05:00:10 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 21:50:46 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 21:50:46 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2835     2805.5  wm-lh-bankssts                    97.4568     9.2627    66.0000   122.0000    56.0000 
    66. 

  66.   2 3002      1961     1931.9  wm-lh-caudalanteriorcingulate     99.2381    10.7265    63.0000   124.0000    61.0000 
    67. 

  67.   3 3003      5575     5614.7  wm-lh-caudalmiddlefrontal         99.8371     9.6725    64.0000   127.0000    63.0000 
    68. 

  68.   4 3005      1585     1576.8  wm-lh-cuneus                      91.8587    10.6133    64.0000   117.0000    53.0000 
    69. 

  69.   5 3006       501      560.2  wm-lh-entorhinal                  71.4451     8.8555    50.0000    96.0000    46.0000 
    70. 

  70.   6 3007      5143     5058.5  wm-lh-fusiform                    88.8061    11.9073    18.0000   118.0000   100.0000 
    71. 

  71.   7 3008      7859     7967.1  wm-lh-inferiorparietal            98.6105    10.2029    65.0000   125.0000    60.0000 
    72. 

  72.   8 3009      4603     4720.1  wm-lh-inferiortemporal            88.8227    12.1239    52.0000   119.0000    67.0000 
    73. 

  73.   9 3010      3264     3223.0  wm-lh-isthmuscingulate            97.0613    12.0113     6.0000   125.0000   119.0000 
    74. 

  74.  10 3011      6739     6875.7  wm-lh-lateraloccipital            95.6189    11.0214    61.0000   128.0000    67.0000 
    75. 

  75.  11 3012      4133     4193.5  wm-lh-lateralorbitofrontal        91.5214    12.1161    39.0000   121.0000    82.0000 
    76. 

  76.  12 3013      4904     4924.4  wm-lh-lingual                     91.2765    12.6051    38.0000   122.0000    84.0000 
    77. 

  77.  13 3014      2648     2612.5  wm-lh-medialorbitofrontal         87.4698    12.8679    23.0000   120.0000    97.0000 
    78. 

  78.  14 3015      3823     4011.8  wm-lh-middletemporal              89.5195    11.2409    58.0000   118.0000    60.0000 
    79. 

  79.  15 3016      1131     1163.2  wm-lh-parahippocampal             82.7905    12.0307    14.0000   114.0000   100.0000 
    80. 

  80.  16 3017      3089     3134.3  wm-lh-paracentral                 98.3334     8.6987    69.0000   123.0000    54.0000 
    81. 

  81.  17 3018      3104     3120.6  wm-lh-parsopercularis             98.3099    11.7229    60.0000   128.0000    68.0000 
    82. 

  82.  18 3019       514      535.8  wm-lh-parsorbitalis               87.7043    10.6671    58.0000   119.0000    61.0000 
    83. 

  83.  19 3020      2177     2221.1  wm-lh-parstriangularis            97.2076    10.8343    65.0000   124.0000    59.0000 
    84. 

  84.  20 3021      2206     2140.1  wm-lh-pericalcarine               92.6537    12.0416     3.0000   117.0000   114.0000 
    85. 

  85.  21 3022      5820     6018.5  wm-lh-postcentral                 96.8127    10.4815    66.0000   126.0000    60.0000 
    86. 

  86.  22 3023      3660     3604.3  wm-lh-posteriorcingulate         100.2650    10.2549    42.0000   126.0000    84.0000 
    87. 

  87.  23 3024     11276    11447.3  wm-lh-precentral                  99.8899     9.4127    64.0000   129.0000    65.0000 
    88. 

  88.  24 3025      7133     7076.3  wm-lh-precuneus                   97.2183    10.1445    36.0000   120.0000    84.0000 
    89. 

  89.  25 3026      1555     1518.0  wm-lh-rostralanteriorcingulate   101.7910    12.1589    43.0000   128.0000    85.0000 
    90. 

  90.  26 3027      9588     9772.9  wm-lh-rostralmiddlefrontal        95.6923    11.2578    61.0000   124.0000    63.0000 
    91. 

  91.  27 3028     14177    14334.7  wm-lh-superiorfrontal             95.1436    10.8007    54.0000   123.0000    69.0000 
    92. 

  92.  28 3029     10152    10355.5  wm-lh-superiorparietal            98.8600    10.2645    60.0000   126.0000    66.0000 
    93. 

  93.  29 3030      5199     5425.1  wm-lh-superiortemporal            91.4366    11.2297    56.0000   120.0000    64.0000 
    94. 

  94.  30 3031      6771     6796.2  wm-lh-supramarginal               98.0660    11.6613    61.0000   131.0000    70.0000 
    95. 

  95.  31 3032       221      245.8  wm-lh-frontalpole                 82.4299     9.9064    62.0000   113.0000    51.0000 
    96. 

  96.  32 3033       581      618.5  wm-lh-temporalpole                77.8124     9.7016    54.0000   108.0000    54.0000 
    97. 

  97.  33 3034       726      697.4  wm-lh-transversetemporal          92.4297     9.3122    64.0000   116.0000    52.0000 
    98. 

  98.  34 3035      7589     7503.6  wm-lh-insula                      90.2021    12.3502    38.0000   127.0000    89.0000 
    99. 

  99.  35 4001      2621     2635.8  wm-rh-bankssts                   101.5330     8.0008    75.0000   130.0000    55.0000 
    100. 

  100.  36 4002      2171     2134.2  wm-rh-caudalanteriorcingulate     99.7536    11.9861    43.0000   129.0000    86.0000 
    101. 

  101.  37 4003      5579     5588.4  wm-rh-caudalmiddlefrontal         99.0375     9.8889    67.0000   129.0000    62.0000 
    102. 

  102.  38 4005      1696     1760.1  wm-rh-cuneus                      87.2506     9.2310    63.0000   110.0000    47.0000 
    103. 

  103.  39 4006       415      452.5  wm-rh-entorhinal                  74.5759     8.6289    46.0000   104.0000    58.0000 
    104. 

  104.  40 4007      4368     4242.5  wm-rh-fusiform                    89.3713    11.4899    53.0000   116.0000    63.0000 
    105. 

  105.  41 4008     10217    10318.3  wm-rh-inferiorparietal            98.7583    10.5613    60.0000   129.0000    69.0000 
    106. 

  106.  42 4009      4196     4291.6  wm-rh-inferiortemporal            89.8158    12.3371    52.0000   120.0000    68.0000 
    107. 

  107.  43 4010      2810     2772.4  wm-rh-isthmuscingulate            96.5139    10.8772    12.0000   125.0000   113.0000 
    108. 

  108.  44 4011      6698     6903.6  wm-rh-lateraloccipital            88.3249    10.1901    57.0000   115.0000    58.0000 
    109. 

  109.  45 4012      4224     4275.7  wm-rh-lateralorbitofrontal        90.5632    12.5053    37.0000   125.0000    88.0000 
    110. 

  110.  46 4013      5169     5169.8  wm-rh-lingual                     87.0153    12.5802     2.0000   119.0000   117.0000 
    111. 

  111.  47 4014      2432     2459.7  wm-rh-medialorbitofrontal         93.1328    12.2231    47.0000   126.0000    79.0000 
    112. 

  112.  48 4015      4770     4956.8  wm-rh-middletemporal              93.6191    12.2276    55.0000   126.0000    71.0000 
    113. 

  113.  49 4016      1297     1320.6  wm-rh-parahippocampal             84.8890    10.4841    46.0000   110.0000    64.0000 
    114. 

  114.  50 4017      3916     3905.6  wm-rh-paracentral                 98.8460     8.5153    69.0000   119.0000    50.0000 
    115. 

  115.  51 4018      2462     2513.7  wm-rh-parsopercularis             94.0804    11.4819    61.0000   123.0000    62.0000 
    116. 

  116.  52 4019       618      664.9  wm-rh-parsorbitalis               83.6019     9.7925    61.0000   110.0000    49.0000 
    117. 

  117.  53 4020      2061     2104.8  wm-rh-parstriangularis            95.6390    10.5498    65.0000   125.0000    60.0000 
    118. 

  118.  54 4021      1997     1880.2  wm-rh-pericalcarine               85.5709     9.6292    33.0000   113.0000    80.0000 
    119. 

  119.  55 4022      4845     5006.7  wm-rh-postcentral                 96.5542     9.9809    62.0000   124.0000    62.0000 
    120. 

  120.  56 4023      3713     3664.7  wm-rh-posteriorcingulate          98.9688    10.7652    44.0000   128.0000    84.0000 
    121. 

  121.  57 4024     11552    11739.7  wm-rh-precentral                  98.5645     9.4059    58.0000   126.0000    68.0000 
    122. 

  122.  58 4025      7068     7027.3  wm-rh-precuneus                   94.7733     9.9845    57.0000   122.0000    65.0000 
    123. 

  123.  59 4026      1388     1365.5  wm-rh-rostralanteriorcingulate   104.7053    11.7454    61.0000   132.0000    71.0000 
    124. 

  124.  60 4027      9272     9568.8  wm-rh-rostralmiddlefrontal       100.0824    11.2205    60.0000   136.0000    76.0000 
    125. 

  125.  61 4028     14300    14447.3  wm-rh-superiorfrontal             98.5603    11.5393    32.0000   133.0000   101.0000 
    126. 

  126.  62 4029      9335     9552.1  wm-rh-superiorparietal            97.3860    10.3331    62.0000   125.0000    63.0000 
    127. 

  127.  63 4030      4358     4576.3  wm-rh-superiortemporal            91.9426    12.6701    53.0000   127.0000    74.0000 
    128. 

  128.  64 4031      6369     6420.0  wm-rh-supramarginal              101.2993    10.6236    65.0000   130.0000    65.0000 
    129. 

  129.  65 4032       275      270.2  wm-rh-frontalpole                 88.1273    11.2111    61.0000   119.0000    58.0000 
    130. 

  130.  66 4033       425      474.7  wm-rh-temporalpole                74.3082     8.5606    58.0000   108.0000    50.0000 
    131. 

  131.  67 4034       636      605.3  wm-rh-transversetemporal          96.5409     9.2275    71.0000   117.0000    46.0000 
    132. 

  132.  68 4035      8663     8562.5  wm-rh-insula                      87.1917    14.5174    22.0000   124.0000   102.0000 
    133. 

  133.  69 5001     20838    20815.3  Left-UnsegmentedWhiteMatter       98.0390    12.3004     6.0000   134.0000   128.0000 
    134. 

  134.  70 5002     22008    22053.0  Right-UnsegmentedWhiteMatter      98.3689    11.4436     0.0000   128.0000   128.0000 
    135.