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0051188
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051188 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-535
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051188
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 6808.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 184112.583844, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 179844.502580, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 363957.086424, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1384759.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1239395.267823, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 02:41:23 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 19:53:33 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 19:53:33 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2043     1996.5  wm-lh-bankssts                    97.8130     7.5592    73.0000   114.0000    41.0000 
    66. 

  66.   2 3002      2291     2259.1  wm-lh-caudalanteriorcingulate    104.3117     8.3411    75.0000   124.0000    49.0000 
    67. 

  67.   3 3003      4430     4406.2  wm-lh-caudalmiddlefrontal         96.9768     9.6336    68.0000   118.0000    50.0000 
    68. 

  68.   4 3005      2122     2144.9  wm-lh-cuneus                      92.8341     9.5928    70.0000   125.0000    55.0000 
    69. 

  69.   5 3006       450      444.0  wm-lh-entorhinal                  77.8511     7.0336    61.0000    99.0000    38.0000 
    70. 

  70.   6 3007      4502     4469.7  wm-lh-fusiform                    94.0573    10.8919    54.0000   120.0000    66.0000 
    71. 

  71.   7 3008      8335     8406.7  wm-lh-inferiorparietal            95.3320    10.7808    67.0000   122.0000    55.0000 
    72. 

  72.   8 3009      3960     4003.3  wm-lh-inferiortemporal            88.4455    10.5038    58.0000   113.0000    55.0000 
    73. 

  73.   9 3010      3518     3541.9  wm-lh-isthmuscingulate           105.4105     9.1569    51.0000   124.0000    73.0000 
    74. 

  74.  10 3011      7553     7615.2  wm-lh-lateraloccipital            90.9583     9.8534    65.0000   120.0000    55.0000 
    75. 

  75.  11 3012      5558     5488.0  wm-lh-lateralorbitofrontal        97.0452    10.1597    66.0000   119.0000    53.0000 
    76. 

  76.  12 3013      4743     4737.8  wm-lh-lingual                     90.5263    10.2029    63.0000   128.0000    65.0000 
    77. 

  77.  13 3014      2852     2801.6  wm-lh-medialorbitofrontal         95.4348    11.4727    43.0000   125.0000    82.0000 
    78. 

  78.  14 3015      3911     3996.0  wm-lh-middletemporal              92.8780    10.0690    67.0000   115.0000    48.0000 
    79. 

  79.  15 3016      1194     1298.1  wm-lh-parahippocampal             88.1457     7.4755    70.0000   110.0000    40.0000 
    80. 

  80.  16 3017      3172     3208.1  wm-lh-paracentral                 94.4231     8.8922    66.0000   114.0000    48.0000 
    81. 

  81.  17 3018      2875     2880.7  wm-lh-parsopercularis             96.5492    10.5670    70.0000   122.0000    52.0000 
    82. 

  82.  18 3019       853      849.3  wm-lh-parsorbitalis               87.6823    10.2714    69.0000   112.0000    43.0000 
    83. 

  83.  19 3020      2405     2402.7  wm-lh-parstriangularis            94.3031    11.2503    65.0000   119.0000    54.0000 
    84. 

  84.  20 3021      3439     3265.9  wm-lh-pericalcarine               92.8968    11.2852    68.0000   122.0000    54.0000 
    85. 

  85.  21 3022      5775     5909.9  wm-lh-postcentral                 92.2341     9.3616    69.0000   120.0000    51.0000 
    86. 

  86.  22 3023      4248     4147.4  wm-lh-posteriorcingulate         100.5579     8.9182    60.0000   129.0000    69.0000 
    87. 

  87.  23 3024     10087    10072.9  wm-lh-precentral                  94.6484     9.5145    67.0000   118.0000    51.0000 
    88. 

  88.  24 3025      8384     8417.2  wm-lh-precuneus                  100.6737     9.6750    54.0000   129.0000    75.0000 
    89. 

  89.  25 3026      2431     2324.1  wm-lh-rostralanteriorcingulate   101.3320    14.6121    41.0000   127.0000    86.0000 
    90. 

  90.  26 3027     10803    10744.7  wm-lh-rostralmiddlefrontal        97.6319     9.6277    68.0000   120.0000    52.0000 
    91. 

  91.  27 3028     14021    13942.2  wm-lh-superiorfrontal             93.8832     9.5653    65.0000   121.0000    56.0000 
    92. 

  92.  28 3029     10206    10253.5  wm-lh-superiorparietal            96.2555    10.1186    53.0000   124.0000    71.0000 
    93. 

  93.  29 3030      5577     5829.3  wm-lh-superiortemporal            93.7423    10.1994    65.0000   117.0000    52.0000 
    94. 

  94.  30 3031      7579     7668.4  wm-lh-supramarginal               98.0284    10.4765    68.0000   124.0000    56.0000 
    95. 

  95.  31 3032       194      192.2  wm-lh-frontalpole                 93.7680     8.6392    77.0000   115.0000    38.0000 
    96. 

  96.  32 3033       311      343.7  wm-lh-temporalpole                89.0932     9.4005    69.0000   115.0000    46.0000 
    97. 

  97.  33 3034       687      683.8  wm-lh-transversetemporal          92.9578     9.0417    70.0000   113.0000    43.0000 
    98. 

  98.  34 3035      8240     8173.3  wm-lh-insula                      92.9241    11.5148    38.0000   118.0000    80.0000 
    99. 

  99.  35 4001      2571     2536.8  wm-rh-bankssts                   101.3547     8.0515    76.0000   120.0000    44.0000 
    100. 

  100.  36 4002      2317     2312.7  wm-rh-caudalanteriorcingulate    105.2335     9.5945    75.0000   123.0000    48.0000 
    101. 

  101.  37 4003      4556     4519.7  wm-rh-caudalmiddlefrontal         95.1446    10.6123    64.0000   119.0000    55.0000 
    102. 

  102.  38 4005      2299     2286.0  wm-rh-cuneus                      92.5637     9.7810    66.0000   114.0000    48.0000 
    103. 

  103.  39 4006       417      459.7  wm-rh-entorhinal                  77.3285     7.6057    64.0000   110.0000    46.0000 
    104. 

  104.  40 4007      4253     4270.7  wm-rh-fusiform                    91.7178    11.5348    46.0000   123.0000    77.0000 
    105. 

  105.  41 4008      7761     7949.4  wm-rh-inferiorparietal            96.8195    10.6738    70.0000   129.0000    59.0000 
    106. 

  106.  42 4009      3325     3321.7  wm-rh-inferiortemporal            90.2659    10.7996    61.0000   121.0000    60.0000 
    107. 

  107.  43 4010      3436     3397.2  wm-rh-isthmuscingulate           105.2474    10.5305    45.0000   126.0000    81.0000 
    108. 

  108.  44 4011      6701     6967.6  wm-rh-lateraloccipital            89.5046     9.3882    65.0000   119.0000    54.0000 
    109. 

  109.  45 4012      5772     5671.6  wm-rh-lateralorbitofrontal        95.2881    11.5461    59.0000   119.0000    60.0000 
    110. 

  110.  46 4013      5150     5210.1  wm-rh-lingual                     90.8418    12.5399    16.0000   131.0000   115.0000 
    111. 

  111.  47 4014      2813     2728.5  wm-rh-medialorbitofrontal         96.1607    10.9203    47.0000   136.0000    89.0000 
    112. 

  112.  48 4015      3670     3858.7  wm-rh-middletemporal              93.6101    10.8578    68.0000   123.0000    55.0000 
    113. 

  113.  49 4016      1288     1323.3  wm-rh-parahippocampal             87.6498    11.0077    55.0000   120.0000    65.0000 
    114. 

  114.  50 4017      4099     3982.9  wm-rh-paracentral                 92.1496     9.8373    65.0000   112.0000    47.0000 
    115. 

  115.  51 4018      2510     2471.7  wm-rh-parsopercularis             96.3689    11.3897    68.0000   120.0000    52.0000 
    116. 

  116.  52 4019       937      920.9  wm-rh-parsorbitalis               87.6297    10.7418    64.0000   112.0000    48.0000 
    117. 

  117.  53 4020      2694     2726.6  wm-rh-parstriangularis            94.7164    10.2004    67.0000   121.0000    54.0000 
    118. 

  118.  54 4021      3035     2949.9  wm-rh-pericalcarine               91.8870    10.7971    65.0000   118.0000    53.0000 
    119. 

  119.  55 4022      5384     5517.6  wm-rh-postcentral                 92.3215    10.1808    67.0000   120.0000    53.0000 
    120. 

  120.  56 4023      3863     3786.7  wm-rh-posteriorcingulate         101.4929     9.2151    56.0000   126.0000    70.0000 
    121. 

  121.  57 4024     10479    10518.9  wm-rh-precentral                  94.6181    10.5455    61.0000   119.0000    58.0000 
    122. 

  122.  58 4025      8157     8013.2  wm-rh-precuneus                   97.4248    10.7107    68.0000   128.0000    60.0000 
    123. 

  123.  59 4026      1623     1563.8  wm-rh-rostralanteriorcingulate   100.2945    11.8139    65.0000   123.0000    58.0000 
    124. 

  124.  60 4027     10626    10676.3  wm-rh-rostralmiddlefrontal       100.0516     9.8255    70.0000   145.0000    75.0000 
    125. 

  125.  61 4028     14556    14433.9  wm-rh-superiorfrontal             93.9867    10.2162    64.0000   121.0000    57.0000 
    126. 

  126.  62 4029     10798    11068.1  wm-rh-superiorparietal            96.4813    10.3307    69.0000   127.0000    58.0000 
    127. 

  127.  63 4030      4285     4522.1  wm-rh-superiortemporal            92.6889     9.5247    68.0000   119.0000    51.0000 
    128. 

  128.  64 4031      6415     6547.5  wm-rh-supramarginal               99.3210    10.5488    70.0000   124.0000    54.0000 
    129. 

  129.  65 4032       272      265.4  wm-rh-frontalpole                 92.7610    11.8380    61.0000   145.0000    84.0000 
    130. 

  130.  66 4033       571      640.1  wm-rh-temporalpole                88.8021     9.1501    71.0000   123.0000    52.0000 
    131. 

  131.  67 4034       422      422.0  wm-rh-transversetemporal          99.1066     8.7014    78.0000   115.0000    37.0000 
    132. 

  132.  68 4035      7848     7882.5  wm-rh-insula                      94.0875    11.0969    29.0000   118.0000    89.0000 
    133. 

  133.  69 5001     24286    24038.2  Left-UnsegmentedWhiteMatter      101.1227    10.3028    36.0000   126.0000    90.0000 
    134. 

  134.  70 5002     23346    23176.1  Right-UnsegmentedWhiteMatter     102.0359     9.7581    25.0000   127.0000   102.0000 
    135.