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0051045
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051045 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-535
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051045
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 5796.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 216595.074609, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 211121.863546, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 427716.938156, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1538982.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1371714.747054, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 02:58:19 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 18:03:40 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 18:03:40 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3299     3242.4  wm-lh-bankssts                    99.6075     9.2188    67.0000   120.0000    53.0000 
    66. 

  66.   2 3002      3882     3948.0  wm-lh-caudalanteriorcingulate    103.9858     6.6928    56.0000   123.0000    67.0000 
    67. 

  67.   3 3003      6927     6899.8  wm-lh-caudalmiddlefrontal         99.5252     9.9867    66.0000   119.0000    53.0000 
    68. 

  68.   4 3005      2040     1970.7  wm-lh-cuneus                      93.7392    11.1004    61.0000   123.0000    62.0000 
    69. 

  69.   5 3006       354      392.7  wm-lh-entorhinal                  84.0537     8.7058    55.0000   108.0000    53.0000 
    70. 

  70.   6 3007      4631     4636.4  wm-lh-fusiform                    87.3239    11.3349    58.0000   121.0000    63.0000 
    71. 

  71.   7 3008     10060    10095.9  wm-lh-inferiorparietal            98.2969    10.8913    66.0000   123.0000    57.0000 
    72. 

  72.   8 3009      4855     4886.8  wm-lh-inferiortemporal            87.0503    11.5377    58.0000   116.0000    58.0000 
    73. 

  73.   9 3010      3419     3412.0  wm-lh-isthmuscingulate           102.6774     9.7901    38.0000   123.0000    85.0000 
    74. 

  74.  10 3011      8387     8539.3  wm-lh-lateraloccipital            90.9514    12.0140    54.0000   125.0000    71.0000 
    75. 

  75.  11 3012      7295     7194.1  wm-lh-lateralorbitofrontal        95.6389    11.6560    52.0000   120.0000    68.0000 
    76. 

  76.  12 3013      4113     4144.1  wm-lh-lingual                     89.2927    12.2229    39.0000   128.0000    89.0000 
    77. 

  77.  13 3014      3199     3142.4  wm-lh-medialorbitofrontal         92.8756    12.3723    48.0000   119.0000    71.0000 
    78. 

  78.  14 3015      4681     4837.6  wm-lh-middletemporal              87.7229    11.1361    60.0000   118.0000    58.0000 
    79. 

  79.  15 3016       925     1003.7  wm-lh-parahippocampal             88.9081    10.6013    56.0000   122.0000    66.0000 
    80. 

  80.  16 3017      5269     5235.8  wm-lh-paracentral                 97.4278     9.7605    61.0000   118.0000    57.0000 
    81. 

  81.  17 3018      3312     3252.9  wm-lh-parsopercularis             97.5474    11.0950    65.0000   120.0000    55.0000 
    82. 

  82.  18 3019       851      871.9  wm-lh-parsorbitalis               87.4841    10.2958    64.0000   123.0000    59.0000 
    83. 

  83.  19 3020      2849     2847.5  wm-lh-parstriangularis            97.1228    10.4650    69.0000   117.0000    48.0000 
    84. 

  84.  20 3021      2636     2499.4  wm-lh-pericalcarine               91.2788    12.0267    29.0000   130.0000   101.0000 
    85. 

  85.  21 3022      7077     7145.4  wm-lh-postcentral                 93.4057    10.4665    63.0000   121.0000    58.0000 
    86. 

  86.  22 3023      4200     4101.3  wm-lh-posteriorcingulate         101.2893     8.7977    44.0000   121.0000    77.0000 
    87. 

  87.  23 3024     14057    13924.7  wm-lh-precentral                  97.0369    10.1811    49.0000   120.0000    71.0000 
    88. 

  88.  24 3025      8672     8590.0  wm-lh-precuneus                  100.6267    10.3129    50.0000   121.0000    71.0000 
    89. 

  89.  25 3026      2906     2775.9  wm-lh-rostralanteriorcingulate    98.5103    11.9411    34.0000   123.0000    89.0000 
    90. 

  90.  26 3027     13248    13194.0  wm-lh-rostralmiddlefrontal        96.1947    11.5801    61.0000   122.0000    61.0000 
    91. 

  91.  27 3028     17783    17708.8  wm-lh-superiorfrontal             95.0434    10.6723    63.0000   120.0000    57.0000 
    92. 

  92.  28 3029     12045    12116.8  wm-lh-superiorparietal            97.5719    10.6654    62.0000   135.0000    73.0000 
    93. 

  93.  29 3030      6747     6905.3  wm-lh-superiortemporal            92.9874    11.7055    50.0000   121.0000    71.0000 
    94. 

  94.  30 3031      7650     7618.0  wm-lh-supramarginal               98.7958    11.6614    67.0000   123.0000    56.0000 
    95. 

  95.  31 3032       402      393.6  wm-lh-frontalpole                 90.9279    10.7370    62.0000   112.0000    50.0000 
    96. 

  96.  32 3033       495      545.4  wm-lh-temporalpole                81.0869     9.4309    60.0000   114.0000    54.0000 
    97. 

  97.  33 3034       704      684.1  wm-lh-transversetemporal          96.0568     9.4958    73.0000   127.0000    54.0000 
    98. 

  98.  34 3035      8698     8606.6  wm-lh-insula                      92.1306    12.1113    49.0000   124.0000    75.0000 
    99. 

  99.  35 4001      2374     2308.4  wm-rh-bankssts                    96.0017     9.5912    66.0000   117.0000    51.0000 
    100. 

  100.  36 4002      3456     3381.1  wm-rh-caudalanteriorcingulate    101.3200     9.9957    60.0000   123.0000    63.0000 
    101. 

  101.  37 4003      6133     6116.6  wm-rh-caudalmiddlefrontal         96.6765    10.1201    66.0000   116.0000    50.0000 
    102. 

  102.  38 4005      2381     2395.0  wm-rh-cuneus                      92.5712     9.4545    66.0000   118.0000    52.0000 
    103. 

  103.  39 4006       333      350.5  wm-rh-entorhinal                  79.5345     9.4309    52.0000   102.0000    50.0000 
    104. 

  104.  40 4007      4149     4146.8  wm-rh-fusiform                    88.6737    10.8531    57.0000   117.0000    60.0000 
    105. 

  105.  41 4008     10751    10745.4  wm-rh-inferiorparietal            96.2042    10.5358    64.0000   125.0000    61.0000 
    106. 

  106.  42 4009      4568     4647.0  wm-rh-inferiortemporal            85.7007    11.4159    55.0000   116.0000    61.0000 
    107. 

  107.  43 4010      3014     3006.7  wm-rh-isthmuscingulate            99.9081     9.2324    54.0000   122.0000    68.0000 
    108. 

  108.  44 4011      8130     8394.5  wm-rh-lateraloccipital            88.9092    10.9143    58.0000   123.0000    65.0000 
    109. 

  109.  45 4012      6638     6510.3  wm-rh-lateralorbitofrontal        95.0697    11.6161    51.0000   120.0000    69.0000 
    110. 

  110.  46 4013      4714     4708.3  wm-rh-lingual                     91.1226    11.2464    28.0000   125.0000    97.0000 
    111. 

  111.  47 4014      3924     3909.5  wm-rh-medialorbitofrontal         96.3583    12.1850    50.0000   122.0000    72.0000 
    112. 

  112.  48 4015      5348     5588.2  wm-rh-middletemporal              88.0084    10.7657    61.0000   115.0000    54.0000 
    113. 

  113.  49 4016      1212     1252.0  wm-rh-parahippocampal             89.9233    10.0239    55.0000   122.0000    67.0000 
    114. 

  114.  50 4017      4708     4721.3  wm-rh-paracentral                 95.1342     8.0904    70.0000   115.0000    45.0000 
    115. 

  115.  51 4018      2557     2493.1  wm-rh-parsopercularis             95.0395    10.7738    67.0000   116.0000    49.0000 
    116. 

  116.  52 4019      1178     1177.1  wm-rh-parsorbitalis               88.5093    10.6460    64.0000   113.0000    49.0000 
    117. 

  117.  53 4020      3097     3092.5  wm-rh-parstriangularis            93.9461    10.6617    64.0000   118.0000    54.0000 
    118. 

  118.  54 4021      2800     2677.5  wm-rh-pericalcarine               90.8632     9.0792    66.0000   123.0000    57.0000 
    119. 

  119.  55 4022      6710     6768.3  wm-rh-postcentral                 90.3721    10.7820    61.0000   117.0000    56.0000 
    120. 

  120.  56 4023      4530     4423.8  wm-rh-posteriorcingulate          98.1768     9.3091    54.0000   119.0000    65.0000 
    121. 

  121.  57 4024     12232    12245.3  wm-rh-precentral                  94.3842     9.4542    65.0000   117.0000    52.0000 
    122. 

  122.  58 4025      8856     8694.0  wm-rh-precuneus                   97.3110     9.6947    65.0000   125.0000    60.0000 
    123. 

  123.  59 4026      1849     1784.7  wm-rh-rostralanteriorcingulate    98.8496    11.9393    63.0000   121.0000    58.0000 
    124. 

  124.  60 4027     15376    15418.8  wm-rh-rostralmiddlefrontal        95.5473    10.9371    61.0000   119.0000    58.0000 
    125. 

  125.  61 4028     18042    17934.4  wm-rh-superiorfrontal             96.1368    10.1794    63.0000   119.0000    56.0000 
    126. 

  126.  62 4029     10308    10435.3  wm-rh-superiorparietal            94.2702    10.3423    64.0000   118.0000    54.0000 
    127. 

  127.  63 4030      5551     5739.2  wm-rh-superiortemporal            91.8928    10.9733    62.0000   125.0000    63.0000 
    128. 

  128.  64 4031      7422     7441.6  wm-rh-supramarginal               98.7102    10.3680    63.0000   122.0000    59.0000 
    129. 

  129.  65 4032       356      363.0  wm-rh-frontalpole                 89.6938     9.7947    67.0000   117.0000    50.0000 
    130. 

  130.  66 4033       579      618.1  wm-rh-temporalpole                79.3316     8.6419    60.0000   103.0000    43.0000 
    131. 

  131.  67 4034       756      712.1  wm-rh-transversetemporal          96.5952     8.8789    73.0000   116.0000    43.0000 
    132. 

  132.  68 4035      8291     8215.9  wm-rh-insula                      90.3349    11.7893    45.0000   116.0000    71.0000 
    133. 

  133.  69 5001     27335    27100.3  Left-UnsegmentedWhiteMatter       99.1416    11.5718    24.0000   136.0000   112.0000 
    134. 

  134.  70 5002     26811    26814.6  Right-UnsegmentedWhiteMatter      98.9320    10.4709    13.0000   127.0000   114.0000 
    135.