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ABIDE_fs-6.0.0
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0050988
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050988 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-200
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050988
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 17526.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 219284.599081, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 218683.553744, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 437968.152825, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1597339.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1489522.967431, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 00:33:18 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:38:32 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:38:32 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3110     3096.7  wm-lh-bankssts                    99.9061     8.3830    69.0000   121.0000    52.0000 
    66. 

  66.   2 3002      2718     2653.2  wm-lh-caudalanteriorcingulate    101.6295     8.4741    60.0000   123.0000    63.0000 
    67. 

  67.   3 3003      5354     5305.4  wm-lh-caudalmiddlefrontal         97.4389    11.0172    64.0000   121.0000    57.0000 
    68. 

  68.   4 3005      2588     2633.8  wm-lh-cuneus                      91.5777    10.6136    63.0000   117.0000    54.0000 
    69. 

  69.   5 3006       869      919.0  wm-lh-entorhinal                  74.2301     8.8863    51.0000    99.0000    48.0000 
    70. 

  70.   6 3007      6510     6527.9  wm-lh-fusiform                    88.2134    11.9232    52.0000   117.0000    65.0000 
    71. 

  71.   7 3008     11301    11489.5  wm-lh-inferiorparietal            96.1174    10.9282    62.0000   121.0000    59.0000 
    72. 

  72.   8 3009      5848     5957.8  wm-lh-inferiortemporal            86.7992    12.2053    52.0000   116.0000    64.0000 
    73. 

  73.   9 3010      4608     4617.0  wm-lh-isthmuscingulate           101.5655    11.8092    13.0000   126.0000   113.0000 
    74. 

  74.  10 3011      8695     8908.4  wm-lh-lateraloccipital            93.0619    10.4427    62.0000   120.0000    58.0000 
    75. 

  75.  11 3012      6597     6551.5  wm-lh-lateralorbitofrontal        96.0799    11.5467    59.0000   120.0000    61.0000 
    76. 

  76.  12 3013      5480     5507.5  wm-lh-lingual                     90.5903    11.5797    23.0000   116.0000    93.0000 
    77. 

  77.  13 3014      3487     3378.9  wm-lh-medialorbitofrontal         92.1385    13.0687    33.0000   121.0000    88.0000 
    78. 

  78.  14 3015      5033     5130.2  wm-lh-middletemporal              89.3805    11.6741    50.0000   119.0000    69.0000 
    79. 

  79.  15 3016      1339     1385.0  wm-lh-parahippocampal             86.0187    10.0194    58.0000   131.0000    73.0000 
    80. 

  80.  16 3017      3690     3731.1  wm-lh-paracentral                 95.9745     8.5186    65.0000   115.0000    50.0000 
    81. 

  81.  17 3018      2650     2645.0  wm-lh-parsopercularis             97.9774    10.4934    65.0000   122.0000    57.0000 
    82. 

  82.  18 3019       928      978.1  wm-lh-parsorbitalis               89.9666    10.2791    66.0000   118.0000    52.0000 
    83. 

  83.  19 3020      2541     2566.1  wm-lh-parstriangularis            99.9020    10.4773    68.0000   123.0000    55.0000 
    84. 

  84.  20 3021      4022     3775.2  wm-lh-pericalcarine               90.7447    10.5449    59.0000   115.0000    56.0000 
    85. 

  85.  21 3022      7330     7420.9  wm-lh-postcentral                 92.1835    10.5776    65.0000   119.0000    54.0000 
    86. 

  86.  22 3023      4242     4187.7  wm-lh-posteriorcingulate          99.1103    10.1136    38.0000   119.0000    81.0000 
    87. 

  87.  23 3024     11534    11598.4  wm-lh-precentral                  96.7161     9.4990    67.0000   122.0000    55.0000 
    88. 

  88.  24 3025     10796    10783.7  wm-lh-precuneus                   97.3544    10.5404    43.0000   119.0000    76.0000 
    89. 

  89.  25 3026      2534     2394.8  wm-lh-rostralanteriorcingulate    97.6204    14.3319    24.0000   122.0000    98.0000 
    90. 

  90.  26 3027     12371    12426.8  wm-lh-rostralmiddlefrontal        99.5765    10.6420    65.0000   125.0000    60.0000 
    91. 

  91.  27 3028     16683    16654.0  wm-lh-superiorfrontal             94.6054    10.6282    63.0000   123.0000    60.0000 
    92. 

  92.  28 3029     12369    12415.1  wm-lh-superiorparietal            95.4135    10.9085    64.0000   120.0000    56.0000 
    93. 

  93.  29 3030      6096     6309.0  wm-lh-superiortemporal            90.8433    11.6826    56.0000   118.0000    62.0000 
    94. 

  94.  30 3031      6965     6995.0  wm-lh-supramarginal               99.3286    11.0573    65.0000   122.0000    57.0000 
    95. 

  95.  31 3032       283      290.1  wm-lh-frontalpole                 92.2191    10.5091    67.0000   112.0000    45.0000 
    96. 

  96.  32 3033       606      644.5  wm-lh-temporalpole                72.9191     9.0194    52.0000    94.0000    42.0000 
    97. 

  97.  33 3034       748      700.4  wm-lh-transversetemporal          94.2193     9.3271    72.0000   117.0000    45.0000 
    98. 

  98.  34 3035      9723     9506.2  wm-lh-insula                      91.9515    11.9651    41.0000   119.0000    78.0000 
    99. 

  99.  35 4001      2996     2969.7  wm-rh-bankssts                    99.8828     8.4017    70.0000   132.0000    62.0000 
    100. 

  100.  36 4002      2242     2220.0  wm-rh-caudalanteriorcingulate    102.6012    10.3475    51.0000   122.0000    71.0000 
    101. 

  101.  37 4003      5521     5558.9  wm-rh-caudalmiddlefrontal         96.7656    10.0340    63.0000   119.0000    56.0000 
    102. 

  102.  38 4005      3142     3150.8  wm-rh-cuneus                      89.2906    10.6648    59.0000   115.0000    56.0000 
    103. 

  103.  39 4006       759      788.3  wm-rh-entorhinal                  75.0303    10.1706    51.0000   103.0000    52.0000 
    104. 

  104.  40 4007      5791     5800.1  wm-rh-fusiform                    90.1236    12.0122    51.0000   119.0000    68.0000 
    105. 

  105.  41 4008     12283    12472.9  wm-rh-inferiorparietal            95.3502    11.2192    53.0000   123.0000    70.0000 
    106. 

  106.  42 4009      5743     5850.3  wm-rh-inferiortemporal            89.7973    12.5955    55.0000   123.0000    68.0000 
    107. 

  107.  43 4010      3774     3784.5  wm-rh-isthmuscingulate           100.1460    11.8978    10.0000   127.0000   117.0000 
    108. 

  108.  44 4011      8840     8991.0  wm-rh-lateraloccipital            91.7960    10.5850    25.0000   113.0000    88.0000 
    109. 

  109.  45 4012      6552     6450.4  wm-rh-lateralorbitofrontal        94.6575    13.3879    11.0000   123.0000   112.0000 
    110. 

  110.  46 4013      6499     6510.3  wm-rh-lingual                     89.6019    12.1521    23.0000   124.0000   101.0000 
    111. 

  111.  47 4014      3423     3287.8  wm-rh-medialorbitofrontal         94.4251    13.4371    28.0000   119.0000    91.0000 
    112. 

  112.  48 4015      5456     5608.3  wm-rh-middletemporal              91.5993    12.3374    55.0000   123.0000    68.0000 
    113. 

  113.  49 4016      1424     1435.3  wm-rh-parahippocampal             88.5667    10.2874    45.0000   130.0000    85.0000 
    114. 

  114.  50 4017      4721     4704.5  wm-rh-paracentral                 96.4383     8.8874    65.0000   115.0000    50.0000 
    115. 

  115.  51 4018      3030     2994.5  wm-rh-parsopercularis             98.7851    10.6653    67.0000   119.0000    52.0000 
    116. 

  116.  52 4019      1107     1135.2  wm-rh-parsorbitalis               94.3108    11.1647    68.0000   121.0000    53.0000 
    117. 

  117.  53 4020      2753     2758.2  wm-rh-parstriangularis           100.2906    10.2403    68.0000   122.0000    54.0000 
    118. 

  118.  54 4021      4286     4120.5  wm-rh-pericalcarine               87.0343    13.0254     3.0000   113.0000   110.0000 
    119. 

  119.  55 4022      6566     6699.1  wm-rh-postcentral                 92.1317    10.6044    65.0000   119.0000    54.0000 
    120. 

  120.  56 4023      4521     4448.2  wm-rh-posteriorcingulate          99.6269     9.9637    46.0000   119.0000    73.0000 
    121. 

  121.  57 4024     11950    12025.8  wm-rh-precentral                  95.2120     9.5836    60.0000   122.0000    62.0000 
    122. 

  122.  58 4025      9705     9705.6  wm-rh-precuneus                   95.0041    10.7185    61.0000   119.0000    58.0000 
    123. 

  123.  59 4026      2023     1995.3  wm-rh-rostralanteriorcingulate   101.8038    10.7704    62.0000   123.0000    61.0000 
    124. 

  124.  60 4027     11953    12069.9  wm-rh-rostralmiddlefrontal       100.0453    10.9940    61.0000   125.0000    64.0000 
    125. 

  125.  61 4028     16939    16870.0  wm-rh-superiorfrontal             96.6071    10.6317    62.0000   125.0000    63.0000 
    126. 

  126.  62 4029     11915    11998.6  wm-rh-superiorparietal            92.9538    10.9377    59.0000   118.0000    59.0000 
    127. 

  127.  63 4030      5497     5618.7  wm-rh-superiortemporal            91.7913    11.9075    53.0000   119.0000    66.0000 
    128. 

  128.  64 4031      7677     7735.7  wm-rh-supramarginal               97.1773    10.8347    47.0000   122.0000    75.0000 
    129. 

  129.  65 4032       343      363.2  wm-rh-frontalpole                 94.0641    10.1637    69.0000   114.0000    45.0000 
    130. 

  130.  66 4033       795      848.6  wm-rh-temporalpole                78.7698     9.5191    57.0000   109.0000    52.0000 
    131. 

  131.  67 4034       612      590.0  wm-rh-transversetemporal          96.5866     9.2012    74.0000   116.0000    42.0000 
    132. 

  132.  68 4035      9006     8854.2  wm-rh-insula                      91.2525    11.9738    54.0000   117.0000    63.0000 
    133. 

  133.  69 5001     27243    27163.1  Left-UnsegmentedWhiteMatter       99.6349    10.4933    20.0000   123.0000   103.0000 
    134. 

  134.  70 5002     27375    27276.3  Right-UnsegmentedWhiteMatter      99.4780    10.8161    14.0000   136.0000   122.0000 
    135.