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ABIDE_fs-6.0.0
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0050745
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050745 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-614
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050745
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 7012.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 216064.269936, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 216545.732157, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 432610.002093, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1608192.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1455399.075158, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:43:42 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:21:38 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:21:38 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      1713     1699.5  wm-lh-bankssts                    98.4443    12.9899    62.0000   117.0000    55.0000 
    66. 

  66.   2 3002      2622     2610.4  wm-lh-caudalanteriorcingulate    100.7841    12.0905    59.0000   121.0000    62.0000 
    67. 

  67.   3 3003      5712     5649.3  wm-lh-caudalmiddlefrontal         93.5555    13.3500    53.0000   117.0000    64.0000 
    68. 

  68.   4 3005      2649     2599.6  wm-lh-cuneus                      87.2809    12.3882    57.0000   111.0000    54.0000 
    69. 

  69.   5 3006      1153     1245.6  wm-lh-entorhinal                  78.4640     9.1072    54.0000   103.0000    49.0000 
    70. 

  70.   6 3007      7635     7626.1  wm-lh-fusiform                    89.6436    12.6818    51.0000   118.0000    67.0000 
    71. 

  71.   7 3008      8017     8198.4  wm-lh-inferiorparietal            95.8265    13.9274    52.0000   119.0000    67.0000 
    72. 

  72.   8 3009      7047     7183.9  wm-lh-inferiortemporal            88.4747    14.1821    49.0000   118.0000    69.0000 
    73. 

  73.   9 3010      3595     3630.2  wm-lh-isthmuscingulate           101.3199    10.5916    46.0000   122.0000    76.0000 
    74. 

  74.  10 3011     10747    10851.0  wm-lh-lateraloccipital            87.5523    13.2823    53.0000   114.0000    61.0000 
    75. 

  75.  11 3012      6399     6336.2  wm-lh-lateralorbitofrontal        93.5809    13.5157    55.0000   119.0000    64.0000 
    76. 

  76.  12 3013      5155     5100.1  wm-lh-lingual                     83.9028    13.7943    14.0000   117.0000   103.0000 
    77. 

  77.  13 3014      3182     3157.0  wm-lh-medialorbitofrontal         95.7929    14.2783    58.0000   120.0000    62.0000 
    78. 

  78.  14 3015      5613     5663.4  wm-lh-middletemporal              91.3262    14.8167    53.0000   118.0000    65.0000 
    79. 

  79.  15 3016      1821     1911.2  wm-lh-parahippocampal             86.4146     9.4724    55.0000   109.0000    54.0000 
    80. 

  80.  16 3017      3962     3927.4  wm-lh-paracentral                 90.6126    12.4706    55.0000   112.0000    57.0000 
    81. 

  81.  17 3018      2762     2792.6  wm-lh-parsopercularis             95.9189    13.0980    56.0000   120.0000    64.0000 
    82. 

  82.  18 3019       912      928.6  wm-lh-parsorbitalis               85.3673    12.8444    58.0000   114.0000    56.0000 
    83. 

  83.  19 3020      2804     2816.4  wm-lh-parstriangularis            94.8092    12.4468    62.0000   118.0000    56.0000 
    84. 

  84.  20 3021      3218     3028.8  wm-lh-pericalcarine               87.0963    13.1536     8.0000   112.0000   104.0000 
    85. 

  85.  21 3022      6609     6624.6  wm-lh-postcentral                 85.9983    14.1242    52.0000   118.0000    66.0000 
    86. 

  86.  22 3023      4465     4425.4  wm-lh-posteriorcingulate          99.4914    11.7923    40.0000   121.0000    81.0000 
    87. 

  87.  23 3024     12280    12133.2  wm-lh-precentral                  90.0802    14.0775    53.0000   118.0000    65.0000 
    88. 

  88.  24 3025      7978     7965.4  wm-lh-precuneus                   92.7153    12.6650    51.0000   116.0000    65.0000 
    89. 

  89.  25 3026      2266     2212.6  wm-lh-rostralanteriorcingulate   100.2370    13.8438    52.0000   126.0000    74.0000 
    90. 

  90.  26 3027     12423    12426.0  wm-lh-rostralmiddlefrontal        96.0584    12.6918    56.0000   128.0000    72.0000 
    91. 

  91.  27 3028     18742    18652.5  wm-lh-superiorfrontal             89.6429    13.3525    51.0000   124.0000    73.0000 
    92. 

  92.  28 3029     11353    11433.7  wm-lh-superiorparietal            92.1099    13.7786    50.0000   118.0000    68.0000 
    93. 

  93.  29 3030      6582     6862.2  wm-lh-superiortemporal            93.3596    14.0276    52.0000   120.0000    68.0000 
    94. 

  94.  30 3031      7111     7106.6  wm-lh-supramarginal               95.5842    14.1746    51.0000   119.0000    68.0000 
    95. 

  95.  31 3032       335      342.4  wm-lh-frontalpole                 87.1313    12.5946    63.0000   116.0000    53.0000 
    96. 

  96.  32 3033       746      779.2  wm-lh-temporalpole                72.6046     9.7653    52.0000    96.0000    44.0000 
    97. 

  97.  33 3034       620      601.0  wm-lh-transversetemporal          94.3387    10.0645    68.0000   116.0000    48.0000 
    98. 

  98.  34 3035      7975     7879.8  wm-lh-insula                      91.3771    13.2857    52.0000   118.0000    66.0000 
    99. 

  99.  35 4001      2056     2018.9  wm-rh-bankssts                    98.1274    10.7159    61.0000   120.0000    59.0000 
    100. 

  100.  36 4002      2507     2496.2  wm-rh-caudalanteriorcingulate    103.2190    11.8362    63.0000   128.0000    65.0000 
    101. 

  101.  37 4003      5338     5251.3  wm-rh-caudalmiddlefrontal         96.1858    12.3267    55.0000   115.0000    60.0000 
    102. 

  102.  38 4005      3037     2970.7  wm-rh-cuneus                      89.3309    12.4950    54.0000   114.0000    60.0000 
    103. 

  103.  39 4006      1076     1139.9  wm-rh-entorhinal                  76.0372     9.5080    54.0000   111.0000    57.0000 
    104. 

  104.  40 4007      6896     6984.6  wm-rh-fusiform                    89.6852    11.5995    51.0000   114.0000    63.0000 
    105. 

  105.  41 4008      9551     9654.0  wm-rh-inferiorparietal            94.7944    13.5091    51.0000   118.0000    67.0000 
    106. 

  106.  42 4009      5992     6108.1  wm-rh-inferiortemporal            86.2605    13.8603    46.0000   117.0000    71.0000 
    107. 

  107.  43 4010      3287     3350.8  wm-rh-isthmuscingulate           101.2242    10.8191    42.0000   119.0000    77.0000 
    108. 

  108.  44 4011     12534    12782.8  wm-rh-lateraloccipital            89.5949    13.4798    47.0000   115.0000    68.0000 
    109. 

  109.  45 4012      5815     5723.2  wm-rh-lateralorbitofrontal        92.9682    13.3851    47.0000   118.0000    71.0000 
    110. 

  110.  46 4013      4438     4411.1  wm-rh-lingual                     83.8177    13.2079    18.0000   114.0000    96.0000 
    111. 

  111.  47 4014      3530     3506.7  wm-rh-medialorbitofrontal         92.0892    13.5739    45.0000   118.0000    73.0000 
    112. 

  112.  48 4015      5973     6105.4  wm-rh-middletemporal              88.0948    13.2535    53.0000   118.0000    65.0000 
    113. 

  113.  49 4016      1637     1723.1  wm-rh-parahippocampal             86.3360     9.3748    57.0000   109.0000    52.0000 
    114. 

  114.  50 4017      4149     4101.9  wm-rh-paracentral                 90.2531    12.8642    56.0000   111.0000    55.0000 
    115. 

  115.  51 4018      2549     2525.6  wm-rh-parsopercularis             93.0577    12.9912    59.0000   121.0000    62.0000 
    116. 

  116.  52 4019      1163     1172.5  wm-rh-parsorbitalis               83.3448    13.2524    56.0000   115.0000    59.0000 
    117. 

  117.  53 4020      3387     3350.0  wm-rh-parstriangularis            91.0065    13.5978    55.0000   117.0000    62.0000 
    118. 

  118.  54 4021      3234     3028.3  wm-rh-pericalcarine               87.1738    12.6606    15.0000   112.0000    97.0000 
    119. 

  119.  55 4022      6395     6472.1  wm-rh-postcentral                 85.0142    12.7007    53.0000   113.0000    60.0000 
    120. 

  120.  56 4023      4010     3939.2  wm-rh-posteriorcingulate          99.2282    11.6334    33.0000   121.0000    88.0000 
    121. 

  121.  57 4024     12129    12030.9  wm-rh-precentral                  90.9467    12.2821    57.0000   114.0000    57.0000 
    122. 

  122.  58 4025      8889     8821.9  wm-rh-precuneus                   96.2022    12.0145    57.0000   117.0000    60.0000 
    123. 

  123.  59 4026      2607     2584.8  wm-rh-rostralanteriorcingulate   104.6486    11.6684    44.0000   125.0000    81.0000 
    124. 

  124.  60 4027     14142    14146.5  wm-rh-rostralmiddlefrontal        93.6146    13.4786    57.0000   122.0000    65.0000 
    125. 

  125.  61 4028     16831    16775.8  wm-rh-superiorfrontal             89.9093    13.0881    52.0000   120.0000    68.0000 
    126. 

  126.  62 4029     10262    10313.5  wm-rh-superiorparietal            92.1718    13.5499    54.0000   117.0000    63.0000 
    127. 

  127.  63 4030      5823     6011.8  wm-rh-superiortemporal            86.4628    13.1501    50.0000   117.0000    67.0000 
    128. 

  128.  64 4031      6989     7008.7  wm-rh-supramarginal               94.2391    13.4708    57.0000   118.0000    61.0000 
    129. 

  129.  65 4032       443      442.4  wm-rh-frontalpole                 83.9684    12.8758    59.0000   114.0000    55.0000 
    130. 

  130.  66 4033       604      658.1  wm-rh-temporalpole                76.5646    10.1719    50.0000   100.0000    50.0000 
    131. 

  131.  67 4034       548      506.8  wm-rh-transversetemporal          89.7664    10.8604    58.0000   111.0000    53.0000 
    132. 

  132.  68 4035      8631     8542.5  wm-rh-insula                      90.4801    12.8656    50.0000   116.0000    66.0000 
    133. 

  133.  69 5001     27807    27679.2  Left-UnsegmentedWhiteMatter       99.4549    11.9874    24.0000   124.0000   100.0000 
    134. 

  134.  70 5002     28918    29007.5  Right-UnsegmentedWhiteMatter      99.1571    11.9983    19.0000   126.0000   107.0000 
    135.