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ABIDE_fs-6.0.0
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0050529
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050529 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-565
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050529
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 24614.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 228169.034181, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 223558.794889, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 451727.829070, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1786517.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1573371.855265, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 09:12:49 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 02:01:18 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 02:01:18 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2686     2682.4  wm-lh-bankssts                    96.1672     8.4887    66.0000   116.0000    50.0000 
    66. 

  66.   2 3002      3060     3016.5  wm-lh-caudalanteriorcingulate    101.2706    10.5775    42.0000   121.0000    79.0000 
    67. 

  67.   3 3003      6294     6313.6  wm-lh-caudalmiddlefrontal        100.8958     8.7302    70.0000   123.0000    53.0000 
    68. 

  68.   4 3005      2693     2680.4  wm-lh-cuneus                      95.2035    10.0206    59.0000   117.0000    58.0000 
    69. 

  69.   5 3006      1188     1243.2  wm-lh-entorhinal                  81.3047     7.6857    63.0000   104.0000    41.0000 
    70. 

  70.   6 3007      7042     7062.1  wm-lh-fusiform                    90.0880     9.9628    51.0000   117.0000    66.0000 
    71. 

  71.   7 3008     10161    10319.8  wm-lh-inferiorparietal            99.2731     9.2763    70.0000   121.0000    51.0000 
    72. 

  72.   8 3009      6809     6963.5  wm-lh-inferiortemporal            89.1176    10.3539    60.0000   115.0000    55.0000 
    73. 

  73.   9 3010      4317     4330.4  wm-lh-isthmuscingulate           102.1503    10.8043    20.0000   125.0000   105.0000 
    74. 

  74.  10 3011      8803     9108.9  wm-lh-lateraloccipital            91.1320    10.6627    58.0000   118.0000    60.0000 
    75. 

  75.  11 3012      6457     6377.8  wm-lh-lateralorbitofrontal        96.3801    10.0635    64.0000   119.0000    55.0000 
    76. 

  76.  12 3013      5102     5127.4  wm-lh-lingual                     89.9894    10.2745    45.0000   116.0000    71.0000 
    77. 

  77.  13 3014      3401     3388.3  wm-lh-medialorbitofrontal         93.4287    11.3108    27.0000   120.0000    93.0000 
    78. 

  78.  14 3015      5630     5795.0  wm-lh-middletemporal              90.0654     9.6912    62.0000   117.0000    55.0000 
    79. 

  79.  15 3016      1490     1571.5  wm-lh-parahippocampal             86.9644     8.9232    56.0000   109.0000    53.0000 
    80. 

  80.  16 3017      4352     4378.8  wm-lh-paracentral                 97.5898     7.8455    70.0000   116.0000    46.0000 
    81. 

  81.  17 3018      3065     3106.6  wm-lh-parsopercularis            100.7191     9.8753    69.0000   122.0000    53.0000 
    82. 

  82.  18 3019      1001     1014.5  wm-lh-parsorbitalis               90.1718     9.1500    68.0000   117.0000    49.0000 
    83. 

  83.  19 3020      2328     2382.8  wm-lh-parstriangularis            99.9884     8.5491    72.0000   119.0000    47.0000 
    84. 

  84.  20 3021      3788     3660.8  wm-lh-pericalcarine               95.0531     9.7685    42.0000   117.0000    75.0000 
    85. 

  85.  21 3022      7716     7934.3  wm-lh-postcentral                 96.4225     9.0501    69.0000   121.0000    52.0000 
    86. 

  86.  22 3023      4596     4565.5  wm-lh-posteriorcingulate         102.4806     9.2613    37.0000   122.0000    85.0000 
    87. 

  87.  23 3024     14410    14584.1  wm-lh-precentral                  99.1631     8.3677    71.0000   121.0000    50.0000 
    88. 

  88.  24 3025      8767     8813.7  wm-lh-precuneus                  100.2928     9.6444    39.0000   121.0000    82.0000 
    89. 

  89.  25 3026      3244     3195.9  wm-lh-rostralanteriorcingulate    97.1036    14.7747    32.0000   122.0000    90.0000 
    90. 

  90.  26 3027     13802    13832.5  wm-lh-rostralmiddlefrontal        96.9821    10.5204    64.0000   123.0000    59.0000 
    91. 

  91.  27 3028     20996    21024.0  wm-lh-superiorfrontal             94.2328     9.5441    64.0000   116.0000    52.0000 
    92. 

  92.  28 3029      9728     9970.3  wm-lh-superiorparietal            98.9829     9.0315    70.0000   120.0000    50.0000 
    93. 

  93.  29 3030      8098     8554.5  wm-lh-superiortemporal            94.4826     9.9026    62.0000   120.0000    58.0000 
    94. 

  94.  30 3031      9031     9079.3  wm-lh-supramarginal               98.5797    10.2298    64.0000   120.0000    56.0000 
    95. 

  95.  31 3032       230      231.3  wm-lh-frontalpole                 90.2435     8.1612    70.0000   110.0000    40.0000 
    96. 

  96.  32 3033       646      679.3  wm-lh-temporalpole                77.2647     7.7434    57.0000    99.0000    42.0000 
    97. 

  97.  33 3034       804      855.3  wm-lh-transversetemporal          97.3968     7.0917    79.0000   116.0000    37.0000 
    98. 

  98.  34 3035     10156    10090.1  wm-lh-insula                      93.8271    11.6120    35.0000   120.0000    85.0000 
    99. 

  99.  35 4001      2965     2963.2  wm-rh-bankssts                   101.5103     7.0326    77.0000   120.0000    43.0000 
    100. 

  100.  36 4002      3631     3574.5  wm-rh-caudalanteriorcingulate    101.3652    11.1614    43.0000   126.0000    83.0000 
    101. 

  101.  37 4003      5506     5498.1  wm-rh-caudalmiddlefrontal         95.9540     9.3861    68.0000   115.0000    47.0000 
    102. 

  102.  38 4005      2621     2624.3  wm-rh-cuneus                      90.6578     9.9298    62.0000   111.0000    49.0000 
    103. 

  103.  39 4006       978     1038.9  wm-rh-entorhinal                  81.5542     6.9456    60.0000   102.0000    42.0000 
    104. 

  104.  40 4007      6868     6943.2  wm-rh-fusiform                    90.2383     9.3688     9.0000   112.0000   103.0000 
    105. 

  105.  41 4008     10998    11219.5  wm-rh-inferiorparietal            97.9930     9.4076    69.0000   120.0000    51.0000 
    106. 

  106.  42 4009      6188     6208.4  wm-rh-inferiortemporal            89.5609    10.2659    60.0000   115.0000    55.0000 
    107. 

  107.  43 4010      3801     3822.6  wm-rh-isthmuscingulate           101.4009    10.6990    17.0000   121.0000   104.0000 
    108. 

  108.  44 4011      9729    10036.4  wm-rh-lateraloccipital            89.7178     9.1654    61.0000   111.0000    50.0000 
    109. 

  109.  45 4012      6187     6217.3  wm-rh-lateralorbitofrontal        98.1786    12.0260    55.0000   123.0000    68.0000 
    110. 

  110.  46 4013      5963     6181.6  wm-rh-lingual                     87.9750    11.4077     9.0000   117.0000   108.0000 
    111. 

  111.  47 4014      3644     3745.9  wm-rh-medialorbitofrontal        100.2253    11.4750    47.0000   127.0000    80.0000 
    112. 

  112.  48 4015      5942     6185.9  wm-rh-middletemporal              90.8511     9.8981    62.0000   114.0000    52.0000 
    113. 

  113.  49 4016      1411     1487.5  wm-rh-parahippocampal             89.0950     8.2406    16.0000   110.0000    94.0000 
    114. 

  114.  50 4017      4779     4725.4  wm-rh-paracentral                 96.8479     8.0529    70.0000   115.0000    45.0000 
    115. 

  115.  51 4018      2967     2946.6  wm-rh-parsopercularis             97.7068     9.2715    69.0000   118.0000    49.0000 
    116. 

  116.  52 4019      1047     1079.0  wm-rh-parsorbitalis               94.5521    10.0196    71.0000   119.0000    48.0000 
    117. 

  117.  53 4020      2643     2707.3  wm-rh-parstriangularis            99.4397     9.9335    69.0000   121.0000    52.0000 
    118. 

  118.  54 4021      3393     3266.1  wm-rh-pericalcarine               87.3398    11.5761     8.0000   110.0000   102.0000 
    119. 

  119.  55 4022      8085     8324.6  wm-rh-postcentral                 97.0490     8.7075    71.0000   120.0000    49.0000 
    120. 

  120.  56 4023      4917     4852.8  wm-rh-posteriorcingulate         100.7584     9.6144    49.0000   120.0000    71.0000 
    121. 

  121.  57 4024     13707    13858.7  wm-rh-precentral                  96.8379     8.2492    66.0000   119.0000    53.0000 
    122. 

  122.  58 4025      8886     8862.1  wm-rh-precuneus                   99.3235     8.6381    69.0000   119.0000    50.0000 
    123. 

  123.  59 4026      2101     2116.6  wm-rh-rostralanteriorcingulate   101.5973    11.6103    53.0000   129.0000    76.0000 
    124. 

  124.  60 4027     11937    12334.1  wm-rh-rostralmiddlefrontal       101.3884     9.2700    70.0000   127.0000    57.0000 
    125. 

  125.  61 4028     20693    20929.5  wm-rh-superiorfrontal             96.3618     9.4184    52.0000   121.0000    69.0000 
    126. 

  126.  62 4029     10073    10365.7  wm-rh-superiorparietal            98.0220     9.3073    69.0000   119.0000    50.0000 
    127. 

  127.  63 4030      7112     7397.4  wm-rh-superiortemporal            92.6641     9.8344    62.0000   116.0000    54.0000 
    128. 

  128.  64 4031      7900     7975.5  wm-rh-supramarginal              102.1351     8.7008    65.0000   123.0000    58.0000 
    129. 

  129.  65 4032       267      280.5  wm-rh-frontalpole                 93.8165     9.3796    74.0000   121.0000    47.0000 
    130. 

  130.  66 4033       801      811.5  wm-rh-temporalpole                79.4407     7.0994    62.0000    96.0000    34.0000 
    131. 

  131.  67 4034       810      800.9  wm-rh-transversetemporal          96.6469     8.8034    75.0000   113.0000    38.0000 
    132. 

  132.  68 4035     10161    10088.2  wm-rh-insula                      92.6313    11.5260    30.0000   122.0000    92.0000 
    133. 

  133.  69 5001     25310    25138.2  Left-UnsegmentedWhiteMatter      100.5425    10.5316    11.0000   122.0000   111.0000 
    134. 

  134.  70 5002     23257    23149.9  Right-UnsegmentedWhiteMatter     100.9125    10.0462    16.0000   126.0000   110.0000 
    135.