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reference-preprocessing
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ABIDE_fs-6.0.0
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ABIDE_fs-6.0.0
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0050459
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stats
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wmparc.stats

wmparc.stats 11 KB
Trvalý odkaz Historie Download

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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050459 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-125
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050459
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 16127.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 244615.097022, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 242151.289933, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 486766.386955, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1637947.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1593208.297882, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 08:00:09 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 01:40:54 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 01:40:54 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3251     3228.8  wm-lh-bankssts                    98.6189     6.5294    72.0000   115.0000    43.0000 
    66. 

  66.   2 3002      2664     2615.3  wm-lh-caudalanteriorcingulate     99.3003     8.9213    65.0000   117.0000    52.0000 
    67. 

  67.   3 3003      7931     7968.3  wm-lh-caudalmiddlefrontal        100.8700     7.3720    73.0000   119.0000    46.0000 
    68. 

  68.   4 3005      2591     2634.2  wm-lh-cuneus                      94.5801     9.3494    70.0000   112.0000    42.0000 
    69. 

  69.   5 3006      1139     1151.1  wm-lh-entorhinal                  82.2397     8.6259    58.0000   103.0000    45.0000 
    70. 

  70.   6 3007      7080     6998.1  wm-lh-fusiform                    90.7571     8.9045    61.0000   112.0000    51.0000 
    71. 

  71.   7 3008     11010    11143.4  wm-lh-inferiorparietal            98.5347     8.3225    68.0000   119.0000    51.0000 
    72. 

  72.   8 3009      6434     6484.8  wm-lh-inferiortemporal            88.9080     9.2028    63.0000   109.0000    46.0000 
    73. 

  73.   9 3010      4159     4182.3  wm-lh-isthmuscingulate            98.6112     8.1665    42.0000   118.0000    76.0000 
    74. 

  74.  10 3011     10208    10495.0  wm-lh-lateraloccipital            96.0143     7.9129    69.0000   114.0000    45.0000 
    75. 

  75.  11 3012      6696     6604.9  wm-lh-lateralorbitofrontal        97.5623     9.9015    63.0000   116.0000    53.0000 
    76. 

  76.  12 3013      6956     7003.0  wm-lh-lingual                     92.9799     9.3935    44.0000   116.0000    72.0000 
    77. 

  77.  13 3014      4402     4270.4  wm-lh-medialorbitofrontal         90.1127    13.6602    16.0000   115.0000    99.0000 
    78. 

  78.  14 3015      6552     6757.2  wm-lh-middletemporal              93.0516     8.6583    67.0000   114.0000    47.0000 
    79. 

  79.  15 3016      1693     1718.6  wm-lh-parahippocampal             87.4649     8.1653    66.0000   111.0000    45.0000 
    80. 

  80.  16 3017      4012     4050.9  wm-lh-paracentral                 95.6919     7.0456    72.0000   111.0000    39.0000 
    81. 

  81.  17 3018      3180     3195.8  wm-lh-parsopercularis            101.3874     8.7876    72.0000   119.0000    47.0000 
    82. 

  82.  18 3019      1106     1096.4  wm-lh-parsorbitalis               93.3960     9.1566    71.0000   113.0000    42.0000 
    83. 

  83.  19 3020      2710     2738.4  wm-lh-parstriangularis           102.5114     8.2421    75.0000   119.0000    44.0000 
    84. 

  84.  20 3021      3766     3600.0  wm-lh-pericalcarine               94.7719     9.0802    62.0000   115.0000    53.0000 
    85. 

  85.  21 3022      7082     7301.5  wm-lh-postcentral                 96.7605     8.4336    71.0000   121.0000    50.0000 
    86. 

  86.  22 3023      5117     5062.8  wm-lh-posteriorcingulate          99.0395     7.6954    51.0000   117.0000    66.0000 
    87. 

  87.  23 3024     13339    13507.8  wm-lh-precentral                  98.3159     7.4754    63.0000   117.0000    54.0000 
    88. 

  88.  24 3025      9199     9193.6  wm-lh-precuneus                   98.7000     7.8978    36.0000   117.0000    81.0000 
    89. 

  89.  25 3026      2376     2303.8  wm-lh-rostralanteriorcingulate    99.4613    11.2411    31.0000   126.0000    95.0000 
    90. 

  90.  26 3027     12056    12256.8  wm-lh-rostralmiddlefrontal        99.2672     9.0244    70.0000   119.0000    49.0000 
    91. 

  91.  27 3028     18734    18774.2  wm-lh-superiorfrontal             95.9258     8.4863    69.0000   115.0000    46.0000 
    92. 

  92.  28 3029     14077    14285.1  wm-lh-superiorparietal            98.9978     7.6767    72.0000   118.0000    46.0000 
    93. 

  93.  29 3030      7535     7799.3  wm-lh-superiortemporal            96.1275     8.4140    67.0000   117.0000    50.0000 
    94. 

  94.  30 3031      8377     8487.5  wm-lh-supramarginal               99.7463     8.6806    68.0000   118.0000    50.0000 
    95. 

  95.  31 3032       273      284.1  wm-lh-frontalpole                 88.2784     8.4028    73.0000   106.0000    33.0000 
    96. 

  96.  32 3033       705      736.6  wm-lh-temporalpole                77.9617     8.3949    60.0000    99.0000    39.0000 
    97. 

  97.  33 3034       865      862.8  wm-lh-transversetemporal          98.0994     7.4167    76.0000   111.0000    35.0000 
    98. 

  98.  34 3035      8290     8194.0  wm-lh-insula                      92.6730    10.5325    42.0000   122.0000    80.0000 
    99. 

  99.  35 4001      3679     3656.1  wm-rh-bankssts                   101.4251     6.3771    78.0000   123.0000    45.0000 
    100. 

  100.  36 4002      3086     3068.6  wm-rh-caudalanteriorcingulate    101.3970     7.1435    69.0000   120.0000    51.0000 
    101. 

  101.  37 4003      6399     6399.5  wm-rh-caudalmiddlefrontal         95.4490     7.6199    70.0000   113.0000    43.0000 
    102. 

  102.  38 4005      2679     2786.8  wm-rh-cuneus                      90.9515     8.2227    66.0000   110.0000    44.0000 
    103. 

  103.  39 4006       830      873.7  wm-rh-entorhinal                  81.0554     7.0792    65.0000    99.0000    34.0000 
    104. 

  104.  40 4007      7917     7876.1  wm-rh-fusiform                    92.5782     9.0167    61.0000   114.0000    53.0000 
    105. 

  105.  41 4008     13973    14236.1  wm-rh-inferiorparietal           101.2957     7.6167    74.0000   121.0000    47.0000 
    106. 

  106.  42 4009      6122     6230.3  wm-rh-inferiortemporal            91.5911    10.1000    64.0000   117.0000    53.0000 
    107. 

  107.  43 4010      3238     3229.7  wm-rh-isthmuscingulate            97.8240     7.7423    38.0000   117.0000    79.0000 
    108. 

  108.  44 4011      8948     9134.6  wm-rh-lateraloccipital            93.6176     8.4231    63.0000   115.0000    52.0000 
    109. 

  109.  45 4012      6519     6495.9  wm-rh-lateralorbitofrontal        94.1689    10.2792    56.0000   115.0000    59.0000 
    110. 

  110.  46 4013      6598     6650.9  wm-rh-lingual                     90.8071     9.5592    38.0000   117.0000    79.0000 
    111. 

  111.  47 4014      2896     2956.6  wm-rh-medialorbitofrontal         95.7465    10.6973    38.0000   115.0000    77.0000 
    112. 

  112.  48 4015      6101     6306.8  wm-rh-middletemporal              93.1555     9.6795    66.0000   114.0000    48.0000 
    113. 

  113.  49 4016      1870     1917.6  wm-rh-parahippocampal             87.7615     8.2301    61.0000   110.0000    49.0000 
    114. 

  114.  50 4017      5416     5445.8  wm-rh-paracentral                 96.8606     6.6810    73.0000   111.0000    38.0000 
    115. 

  115.  51 4018      2839     2821.6  wm-rh-parsopercularis             94.7672     8.9561    64.0000   112.0000    48.0000 
    116. 

  116.  52 4019      1349     1389.1  wm-rh-parsorbitalis               93.3936     9.1534    71.0000   113.0000    42.0000 
    117. 

  117.  53 4020      2568     2578.8  wm-rh-parstriangularis            97.2220     8.8441    71.0000   114.0000    43.0000 
    118. 

  118.  54 4021      3885     3699.3  wm-rh-pericalcarine               91.0772     8.3986    66.0000   112.0000    46.0000 
    119. 

  119.  55 4022      7346     7616.0  wm-rh-postcentral                 95.4398     7.7665    71.0000   115.0000    44.0000 
    120. 

  120.  56 4023      4427     4439.6  wm-rh-posteriorcingulate          98.6582     6.5680    57.0000   113.0000    56.0000 
    121. 

  121.  57 4024     13788    13918.1  wm-rh-precentral                  95.3241     7.2193    50.0000   113.0000    63.0000 
    122. 

  122.  58 4025      9310     9418.3  wm-rh-precuneus                   97.3281     7.2529    73.0000   113.0000    40.0000 
    123. 

  123.  59 4026      2082     2062.3  wm-rh-rostralanteriorcingulate    99.9184     9.1799    68.0000   119.0000    51.0000 
    124. 

  124.  60 4027     13002    13314.4  wm-rh-rostralmiddlefrontal        99.4852     8.6702    72.0000   117.0000    45.0000 
    125. 

  125.  61 4028     19596    19678.7  wm-rh-superiorfrontal             95.6263     8.4784    69.0000   116.0000    47.0000 
    126. 

  126.  62 4029     13754    14018.2  wm-rh-superiorparietal            98.9066     7.6649    73.0000   118.0000    45.0000 
    127. 

  127.  63 4030      5941     6157.3  wm-rh-superiortemporal            92.1835    10.1366    62.0000   116.0000    54.0000 
    128. 

  128.  64 4031      7679     7848.0  wm-rh-supramarginal              101.6070     7.7878    77.0000   121.0000    44.0000 
    129. 

  129.  65 4032       222      230.2  wm-rh-frontalpole                 89.7793     7.2854    76.0000   110.0000    34.0000 
    130. 

  130.  66 4033       685      691.0  wm-rh-temporalpole                79.1664     7.9662    64.0000   106.0000    42.0000 
    131. 

  131.  67 4034       653      647.5  wm-rh-transversetemporal          97.8132     6.2882    79.0000   110.0000    31.0000 
    132. 

  132.  68 4035      8782     8651.2  wm-rh-insula                      87.6057    10.9949    28.0000   111.0000    83.0000 
    133. 

  133.  69 5001     37653    37381.5  Left-UnsegmentedWhiteMatter       99.6696     9.2128    22.0000   120.0000    98.0000 
    134. 

  134.  70 5002     36056    36037.8  Right-UnsegmentedWhiteMatter      98.8207     8.2823    18.0000   120.0000   102.0000 
    135.