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ABIDE_fs-6.0.0
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0050436
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050436 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-542
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050436
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 9735.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 229074.003988, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 226099.048209, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 455173.052197, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1709854.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1657174.603680, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 08:20:16 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 01:16:11 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 01:16:11 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2965     2931.9  wm-lh-bankssts                    98.3788     8.1721    68.0000   116.0000    48.0000 
    66. 

  66.   2 3002      3164     3139.0  wm-lh-caudalanteriorcingulate    102.4807     9.3887    51.0000   132.0000    81.0000 
    67. 

  67.   3 3003      6724     6859.5  wm-lh-caudalmiddlefrontal        101.0619     9.1532    25.0000   132.0000   107.0000 
    68. 

  68.   4 3005      2165     2135.2  wm-lh-cuneus                      90.5875    11.0514    63.0000   117.0000    54.0000 
    69. 

  69.   5 3006       900      958.5  wm-lh-entorhinal                  80.3900     8.0254    58.0000   104.0000    46.0000 
    70. 

  70.   6 3007      7264     7211.5  wm-lh-fusiform                    90.1238    10.5884    34.0000   116.0000    82.0000 
    71. 

  71.   7 3008     10264    10388.1  wm-lh-inferiorparietal            98.9157     9.5731    65.0000   122.0000    57.0000 
    72. 

  72.   8 3009      6240     6290.3  wm-lh-inferiortemporal            89.5705    10.7961    58.0000   115.0000    57.0000 
    73. 

  73.   9 3010      3881     3908.3  wm-lh-isthmuscingulate            99.4254     9.4447    40.0000   120.0000    80.0000 
    74. 

  74.  10 3011     10710    10979.1  wm-lh-lateraloccipital            95.3481    10.3728    58.0000   119.0000    61.0000 
    75. 

  75.  11 3012      6927     6979.3  wm-lh-lateralorbitofrontal        95.9297    10.8719    65.0000   121.0000    56.0000 
    76. 

  76.  12 3013      4523     4534.4  wm-lh-lingual                     86.8176    10.8728    41.0000   115.0000    74.0000 
    77. 

  77.  13 3014      2949     3047.2  wm-lh-medialorbitofrontal         90.9393    10.7159    59.0000   113.0000    54.0000 
    78. 

  78.  14 3015      5779     5987.3  wm-lh-middletemporal              92.8893    10.9978    49.0000   119.0000    70.0000 
    79. 

  79.  15 3016      1591     1667.0  wm-lh-parahippocampal             87.2225     9.0095    44.0000   111.0000    67.0000 
    80. 

  80.  16 3017      3606     3659.8  wm-lh-paracentral                 95.3408     8.2901    49.0000   115.0000    66.0000 
    81. 

  81.  17 3018      3213     3263.9  wm-lh-parsopercularis            100.7084    11.2008    69.0000   128.0000    59.0000 
    82. 

  82.  18 3019       992     1049.7  wm-lh-parsorbitalis               90.7893    10.5737    64.0000   117.0000    53.0000 
    83. 

  83.  19 3020      2579     2639.3  wm-lh-parstriangularis            99.4835     9.6798    72.0000   123.0000    51.0000 
    84. 

  84.  20 3021      3606     3461.6  wm-lh-pericalcarine               92.4997    12.6394     5.0000   119.0000   114.0000 
    85. 

  85.  21 3022      7334     7534.6  wm-lh-postcentral                 97.4489    10.4024    68.0000   125.0000    57.0000 
    86. 

  86.  22 3023      5051     4947.0  wm-lh-posteriorcingulate          97.5967    10.0014    40.0000   119.0000    79.0000 
    87. 

  87.  23 3024     13719    13928.0  wm-lh-precentral                  98.0386     9.5487    38.0000   130.0000    92.0000 
    88. 

  88.  24 3025      8995     9048.8  wm-lh-precuneus                   97.7152     9.2851    53.0000   116.0000    63.0000 
    89. 

  89.  25 3026      2852     2812.4  wm-lh-rostralanteriorcingulate   102.9236    11.6273    35.0000   131.0000    96.0000 
    90. 

  90.  26 3027     12207    12521.4  wm-lh-rostralmiddlefrontal        96.1361    10.6588    65.0000   127.0000    62.0000 
    91. 

  91.  27 3028     18708    18916.1  wm-lh-superiorfrontal             93.9053    10.1511    32.0000   121.0000    89.0000 
    92. 

  92.  28 3029     10513    10926.7  wm-lh-superiorparietal            98.0410     9.2817    66.0000   120.0000    54.0000 
    93. 

  93.  29 3030      7809     8137.1  wm-lh-superiortemporal            96.7610     9.7750    66.0000   120.0000    54.0000 
    94. 

  94.  30 3031     10585    10729.5  wm-lh-supramarginal               99.5749     9.7156    63.0000   124.0000    61.0000 
    95. 

  95.  31 3032       338      358.3  wm-lh-frontalpole                 90.8964     8.4054    71.0000   111.0000    40.0000 
    96. 

  96.  32 3033       635      670.6  wm-lh-temporalpole                79.0551     8.5956    54.0000   103.0000    49.0000 
    97. 

  97.  33 3034       707      711.5  wm-lh-transversetemporal          96.6096     7.5049    75.0000   116.0000    41.0000 
    98. 

  98.  34 3035     10121    10061.2  wm-lh-insula                      92.1826    11.7886    44.0000   126.0000    82.0000 
    99. 

  99.  35 4001      3091     3073.4  wm-rh-bankssts                   102.7263     7.7765    71.0000   123.0000    52.0000 
    100. 

  100.  36 4002      3586     3525.4  wm-rh-caudalanteriorcingulate    101.2911    10.8667    55.0000   136.0000    81.0000 
    101. 

  101.  37 4003      5853     5971.6  wm-rh-caudalmiddlefrontal         96.6697     9.1246    46.0000   120.0000    74.0000 
    102. 

  102.  38 4005      2536     2577.2  wm-rh-cuneus                      88.7405     9.0204    64.0000   110.0000    46.0000 
    103. 

  103.  39 4006       621      699.9  wm-rh-entorhinal                  75.9163     7.9784    55.0000    98.0000    43.0000 
    104. 

  104.  40 4007      6018     5969.3  wm-rh-fusiform                    91.2273    10.7436    56.0000   115.0000    59.0000 
    105. 

  105.  41 4008     12784    13053.0  wm-rh-inferiorparietal            99.0498     9.7206    56.0000   122.0000    66.0000 
    106. 

  106.  42 4009      5107     5211.2  wm-rh-inferiortemporal            88.6509    12.6444    56.0000   119.0000    63.0000 
    107. 

  107.  43 4010      3207     3185.1  wm-rh-isthmuscingulate            97.9470     8.7810    40.0000   117.0000    77.0000 
    108. 

  108.  44 4011      9101     9336.1  wm-rh-lateraloccipital            89.8725     9.9094    59.0000   119.0000    60.0000 
    109. 

  109.  45 4012      6836     6851.8  wm-rh-lateralorbitofrontal        94.2458    11.8883    59.0000   121.0000    62.0000 
    110. 

  110.  46 4013      6342     6392.2  wm-rh-lingual                     88.1823    11.3822    22.0000   121.0000    99.0000 
    111. 

  111.  47 4014      3737     3892.0  wm-rh-medialorbitofrontal         96.0712    12.2955    61.0000   123.0000    62.0000 
    112. 

  112.  48 4015      6804     6952.5  wm-rh-middletemporal              92.1802    12.5752    56.0000   122.0000    66.0000 
    113. 

  113.  49 4016      1690     1751.8  wm-rh-parahippocampal             88.3911     9.5283    46.0000   112.0000    66.0000 
    114. 

  114.  50 4017      5290     5346.3  wm-rh-paracentral                 96.2800     7.8929    67.0000   115.0000    48.0000 
    115. 

  115.  51 4018      3197     3258.0  wm-rh-parsopercularis             94.7889    10.9641    50.0000   118.0000    68.0000 
    116. 

  116.  52 4019      1260     1311.1  wm-rh-parsorbitalis               87.1135     9.9690    56.0000   111.0000    55.0000 
    117. 

  117.  53 4020      2839     2915.1  wm-rh-parstriangularis            95.8637    10.7521    65.0000   125.0000    60.0000 
    118. 

  118.  54 4021      3271     3136.4  wm-rh-pericalcarine               87.0257    10.1531    35.0000   114.0000    79.0000 
    119. 

  119.  55 4022      7250     7440.0  wm-rh-postcentral                 96.0484     9.5253    67.0000   130.0000    63.0000 
    120. 

  120.  56 4023      4950     4876.2  wm-rh-posteriorcingulate          97.1523     9.7794    43.0000   119.0000    76.0000 
    121. 

  121.  57 4024     13594    13811.9  wm-rh-precentral                  95.6186     8.8112    65.0000   118.0000    53.0000 
    122. 

  122.  58 4025      8323     8336.0  wm-rh-precuneus                   96.5074     8.7720    52.0000   116.0000    64.0000 
    123. 

  123.  59 4026      1993     1991.5  wm-rh-rostralanteriorcingulate   102.5534    11.6202    67.0000   136.0000    69.0000 
    124. 

  124.  60 4027     12136    12731.3  wm-rh-rostralmiddlefrontal       100.4469     9.3115    67.0000   126.0000    59.0000 
    125. 

  125.  61 4028     16751    17165.9  wm-rh-superiorfrontal             97.1883     9.7313    43.0000   126.0000    83.0000 
    126. 

  126.  62 4029     10365    10663.6  wm-rh-superiorparietal            97.2530     9.4964    62.0000   123.0000    61.0000 
    127. 

  127.  63 4030      6926     7177.1  wm-rh-superiortemporal            93.2275    11.8737    56.0000   124.0000    68.0000 
    128. 

  128.  64 4031      9074     9164.4  wm-rh-supramarginal              102.6633     9.5168    13.0000   126.0000   113.0000 
    129. 

  129.  65 4032       272      311.3  wm-rh-frontalpole                 96.5147     9.3268    77.0000   121.0000    44.0000 
    130. 

  130.  66 4033       533      576.4  wm-rh-temporalpole                76.9756     8.3462    58.0000   101.0000    43.0000 
    131. 

  131.  67 4034       617      601.8  wm-rh-transversetemporal          95.8558     7.6943    75.0000   113.0000    38.0000 
    132. 

  132.  68 4035     10424    10361.9  wm-rh-insula                      89.2171    11.9328    34.0000   116.0000    82.0000 
    133. 

  133.  69 5001     28311    27856.5  Left-UnsegmentedWhiteMatter       97.7321    11.7703    14.0000   130.0000   116.0000 
    134. 

  134.  70 5002     28004    27862.2  Right-UnsegmentedWhiteMatter      97.6327    11.1389    14.0000   126.0000   112.0000 
    135.