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0050187
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050187 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-959
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050187
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 26509.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 242767.075339, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 236462.403176, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 479229.478515, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 2251952.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1684605.103023, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:07:38 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 19:18:21 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 19:18:21 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2396     2364.5  wm-lh-bankssts                   102.7922     9.0250    74.0000   129.0000    55.0000 
    66. 

  66.   2 3002      3110     3012.4  wm-lh-caudalanteriorcingulate    101.0672    11.1340    68.0000   126.0000    58.0000 
    67. 

  67.   3 3003      8591     8471.1  wm-lh-caudalmiddlefrontal         96.5739     9.2058    65.0000   122.0000    57.0000 
    68. 

  68.   4 3005      2641     2635.3  wm-lh-cuneus                      97.3537     9.6649    69.0000   125.0000    56.0000 
    69. 

  69.   5 3006      1112     1132.7  wm-lh-entorhinal                  77.5108     8.0345    58.0000    99.0000    41.0000 
    70. 

  70.   6 3007      7135     7040.6  wm-lh-fusiform                    90.0126    10.5955    46.0000   115.0000    69.0000 
    71. 

  71.   7 3008     12450    12485.7  wm-lh-inferiorparietal           101.8233     8.9131    68.0000   130.0000    62.0000 
    72. 

  72.   8 3009      7997     7973.8  wm-lh-inferiortemporal            90.6760    11.3969    54.0000   121.0000    67.0000 
    73. 

  73.   9 3010      4855     4837.8  wm-lh-isthmuscingulate           102.9320    10.9270    10.0000   127.0000   117.0000 
    74. 

  74.  10 3011      9862    10078.4  wm-lh-lateraloccipital            96.6416    10.0767    67.0000   128.0000    61.0000 
    75. 

  75.  11 3012      7877     7712.5  wm-lh-lateralorbitofrontal        93.8678    10.4757    52.0000   119.0000    67.0000 
    76. 

  76.  12 3013      5084     5117.0  wm-lh-lingual                     90.9685     9.7346    42.0000   115.0000    73.0000 
    77. 

  77.  13 3014      3941     3831.8  wm-lh-medialorbitofrontal         88.7531    13.0717    16.0000   122.0000   106.0000 
    78. 

  78.  14 3015      7476     7515.8  wm-lh-middletemporal              96.5784    11.1145    62.0000   126.0000    64.0000 
    79. 

  79.  15 3016      1535     1599.5  wm-lh-parahippocampal             87.0248     9.2144    62.0000   111.0000    49.0000 
    80. 

  80.  16 3017      3425     3415.4  wm-lh-paracentral                 94.1001     7.6061    70.0000   114.0000    44.0000 
    81. 

  81.  17 3018      2646     2623.0  wm-lh-parsopercularis             98.3844     9.6423    64.0000   122.0000    58.0000 
    82. 

  82.  18 3019      1322     1310.3  wm-lh-parsorbitalis               94.7678     9.7002    68.0000   119.0000    51.0000 
    83. 

  83.  19 3020      2658     2636.8  wm-lh-parstriangularis            99.3491     9.2716    70.0000   123.0000    53.0000 
    84. 

  84.  20 3021      3212     3089.4  wm-lh-pericalcarine               95.1233    10.4761    41.0000   122.0000    81.0000 
    85. 

  85.  21 3022      5758     5934.9  wm-lh-postcentral                 99.3194    10.2370    70.0000   129.0000    59.0000 
    86. 

  86.  22 3023      5084     5035.7  wm-lh-posteriorcingulate         100.5427     9.5734    51.0000   125.0000    74.0000 
    87. 

  87.  23 3024     12171    12218.7  wm-lh-precentral                  98.5491     9.1958    67.0000   132.0000    65.0000 
    88. 

  88.  24 3025      9472     9406.6  wm-lh-precuneus                   98.3503     8.9803    60.0000   123.0000    63.0000 
    89. 

  89.  25 3026      3425     3365.0  wm-lh-rostralanteriorcingulate   100.3448    11.2088    52.0000   125.0000    73.0000 
    90. 

  90.  26 3027     15621    15593.4  wm-lh-rostralmiddlefrontal        98.7852     9.5480    67.0000   124.0000    57.0000 
    91. 

  91.  27 3028     18532    18422.4  wm-lh-superiorfrontal             94.7318     8.9054    64.0000   125.0000    61.0000 
    92. 

  92.  28 3029     11256    11387.9  wm-lh-superiorparietal           100.2533     8.1306    73.0000   122.0000    49.0000 
    93. 

  93.  29 3030      7034     7248.2  wm-lh-superiortemporal            96.1737    11.4316    52.0000   129.0000    77.0000 
    94. 

  94.  30 3031      7141     7101.7  wm-lh-supramarginal              102.6530    10.1785    71.0000   130.0000    59.0000 
    95. 

  95.  31 3032       318      318.0  wm-lh-frontalpole                 94.4623     9.7972    70.0000   118.0000    48.0000 
    96. 

  96.  32 3033       768      801.0  wm-lh-temporalpole                78.1445     8.8074    55.0000   102.0000    47.0000 
    97. 

  97.  33 3034       771      753.5  wm-lh-transversetemporal          97.5837     9.0886    73.0000   123.0000    50.0000 
    98. 

  98.  34 3035      9742     9657.9  wm-lh-insula                      91.6581    11.9893    40.0000   122.0000    82.0000 
    99. 

  99.  35 4001      3347     3318.8  wm-rh-bankssts                   100.9946     7.8677    70.0000   125.0000    55.0000 
    100. 

  100.  36 4002      3048     2992.6  wm-rh-caudalanteriorcingulate    101.6316    10.2353    69.0000   124.0000    55.0000 
    101. 

  101.  37 4003      5035     5022.3  wm-rh-caudalmiddlefrontal         95.8618     8.6554    68.0000   121.0000    53.0000 
    102. 

  102.  38 4005      2573     2596.4  wm-rh-cuneus                      96.3988     9.6643    70.0000   119.0000    49.0000 
    103. 

  103.  39 4006      1120     1162.2  wm-rh-entorhinal                  79.1179     8.3238    54.0000   101.0000    47.0000 
    104. 

  104.  40 4007      6483     6507.8  wm-rh-fusiform                    91.6745    10.0827    47.0000   115.0000    68.0000 
    105. 

  105.  41 4008     11213    11282.5  wm-rh-inferiorparietal            99.8432     8.4776    71.0000   120.0000    49.0000 
    106. 

  106.  42 4009      7489     7510.6  wm-rh-inferiortemporal            90.4856    10.7024    56.0000   120.0000    64.0000 
    107. 

  107.  43 4010      4405     4437.1  wm-rh-isthmuscingulate           104.0713    10.3394    24.0000   126.0000   102.0000 
    108. 

  108.  44 4011      9407     9679.7  wm-rh-lateraloccipital            94.7076     9.1819    64.0000   122.0000    58.0000 
    109. 

  109.  45 4012      8130     8027.4  wm-rh-lateralorbitofrontal        96.4584    10.1753    65.0000   120.0000    55.0000 
    110. 

  110.  46 4013      6135     6157.9  wm-rh-lingual                     92.3568    10.8000     3.0000   119.0000   116.0000 
    111. 

  111.  47 4014      4510     4483.3  wm-rh-medialorbitofrontal         95.0483    12.9699    35.0000   121.0000    86.0000 
    112. 

  112.  48 4015      7229     7222.7  wm-rh-middletemporal              91.3417    10.8551    59.0000   121.0000    62.0000 
    113. 

  113.  49 4016      1443     1501.2  wm-rh-parahippocampal             90.2557     9.1819    54.0000   114.0000    60.0000 
    114. 

  114.  50 4017      4015     4031.4  wm-rh-paracentral                 96.3118     8.5357    66.0000   119.0000    53.0000 
    115. 

  115.  51 4018      2830     2826.4  wm-rh-parsopercularis             98.8254     9.7939    64.0000   122.0000    58.0000 
    116. 

  116.  52 4019      1499     1457.1  wm-rh-parsorbitalis               94.1841    11.2705    64.0000   118.0000    54.0000 
    117. 

  117.  53 4020      3238     3243.0  wm-rh-parstriangularis            97.6439     9.6413    68.0000   121.0000    53.0000 
    118. 

  118.  54 4021      4012     3755.0  wm-rh-pericalcarine               89.9903    13.6542     1.0000   119.0000   118.0000 
    119. 

  119.  55 4022      4911     5010.7  wm-rh-postcentral                 96.8334     9.1296    69.0000   121.0000    52.0000 
    120. 

  120.  56 4023      4349     4302.0  wm-rh-posteriorcingulate          99.5896     8.9235    56.0000   121.0000    65.0000 
    121. 

  121.  57 4024     10762    10793.2  wm-rh-precentral                  96.3986     8.2148    68.0000   123.0000    55.0000 
    122. 

  122.  58 4025     10045     9970.7  wm-rh-precuneus                  100.1136     9.2627    53.0000   122.0000    69.0000 
    123. 

  123.  59 4026      2121     2046.1  wm-rh-rostralanteriorcingulate    96.9519    11.8499    65.0000   122.0000    57.0000 
    124. 

  124.  60 4027     17933    17926.8  wm-rh-rostralmiddlefrontal        99.4056     9.8313    66.0000   130.0000    64.0000 
    125. 

  125.  61 4028     17911    17830.3  wm-rh-superiorfrontal             97.3865     9.6057    65.0000   125.0000    60.0000 
    126. 

  126.  62 4029      9078     9143.8  wm-rh-superiorparietal            99.8287     7.9172    71.0000   120.0000    49.0000 
    127. 

  127.  63 4030      6357     6545.9  wm-rh-superiortemporal            91.5877    11.0766    59.0000   121.0000    62.0000 
    128. 

  128.  64 4031      6273     6343.3  wm-rh-supramarginal              101.0247     9.1911    70.0000   124.0000    54.0000 
    129. 

  129.  65 4032       297      300.9  wm-rh-frontalpole                 96.3805    10.9837    70.0000   122.0000    52.0000 
    130. 

  130.  66 4033       915      884.5  wm-rh-temporalpole                76.1880     8.3063    53.0000    97.0000    44.0000 
    131. 

  131.  67 4034       715      695.2  wm-rh-transversetemporal          97.8252     8.6130    72.0000   117.0000    45.0000 
    132. 

  132.  68 4035     10559    10445.7  wm-rh-insula                      91.2886    11.4288    26.0000   119.0000    93.0000 
    133. 

  133.  69 5001     34609    34433.6  Left-UnsegmentedWhiteMatter       99.4211    10.7890    14.0000   126.0000   112.0000 
    134. 

  134.  70 5002     34957    34936.5  Right-UnsegmentedWhiteMatter      99.1381     9.8929     5.0000   124.0000   119.0000 
    135.