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ABIDE_fs-6.0.0
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0050185
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050185 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-581
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050185
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 9653.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 144555.383830, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 142725.168155, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 287280.551985, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1677443.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1582637.248442, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/10 12:43:22 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/09 14:54:19 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/09 14:54:19 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2141     2154.7  wm-lh-bankssts                   100.7651     9.8046    72.0000   132.0000    60.0000 
    66. 

  66.   2 3002      2586     2572.4  wm-lh-caudalanteriorcingulate     97.1628    14.1689    43.0000   135.0000    92.0000 
    67. 

  67.   3 3003      4772     4844.1  wm-lh-caudalmiddlefrontal        100.3818     9.4826    45.0000   142.0000    97.0000 
    68. 

  68.   4 3005      1590     1586.0  wm-lh-cuneus                      97.0434    10.2252    65.0000   128.0000    63.0000 
    69. 

  69.   5 3006       424      497.2  wm-lh-entorhinal                  88.6981    11.2793    53.0000   124.0000    71.0000 
    70. 

  70.   6 3007      3276     3414.6  wm-lh-fusiform                    93.3913    10.3687    41.0000   126.0000    85.0000 
    71. 

  71.   7 3008      5317     5457.0  wm-lh-inferiorparietal           102.2552     9.9858    67.0000   138.0000    71.0000 
    72. 

  72.   8 3009      3146     3321.0  wm-lh-inferiortemporal            96.3058    11.3928    65.0000   151.0000    86.0000 
    73. 

  73.   9 3010      3852     3886.7  wm-lh-isthmuscingulate           104.0768    13.2752    32.0000   142.0000   110.0000 
    74. 

  74.  10 3011      5032     5173.0  wm-lh-lateraloccipital            95.8223    10.3771    66.0000   130.0000    64.0000 
    75. 

  75.  11 3012      4549     4564.1  wm-lh-lateralorbitofrontal       103.0662    12.4787    58.0000   156.0000    98.0000 
    76. 

  76.  12 3013      2896     2943.1  wm-lh-lingual                     96.5211    13.4653    46.0000   132.0000    86.0000 
    77. 

  77.  13 3014      2984     3057.0  wm-lh-medialorbitofrontal        104.4678    13.6568    68.0000   164.0000    96.0000 
    78. 

  78.  14 3015      2658     2921.7  wm-lh-middletemporal              97.8198     9.5635    67.0000   131.0000    64.0000 
    79. 

  79.  15 3016       605      741.5  wm-lh-parahippocampal             91.5124     8.4706    69.0000   120.0000    51.0000 
    80. 

  80.  16 3017      2494     2582.7  wm-lh-paracentral                100.2318     8.3801    72.0000   134.0000    62.0000 
    81. 

  81.  17 3018      1783     1942.8  wm-lh-parsopercularis             99.2944     8.3097    76.0000   127.0000    51.0000 
    82. 

  82.  18 3019       782      794.7  wm-lh-parsorbitalis               93.7749    11.2808    56.0000   132.0000    76.0000 
    83. 

  83.  19 3020      2381     2450.7  wm-lh-parstriangularis           100.3427    10.8806    51.0000   134.0000    83.0000 
    84. 

  84.  20 3021      1666     1643.4  wm-lh-pericalcarine              104.7023    12.8290    50.0000   135.0000    85.0000 
    85. 

  85.  21 3022      4659     4860.8  wm-lh-postcentral                 99.4254    10.1641    69.0000   139.0000    70.0000 
    86. 

  86.  22 3023      3247     3237.2  wm-lh-posteriorcingulate          99.9282    13.7705    41.0000   137.0000    96.0000 
    87. 

  87.  23 3024      6010     6288.5  wm-lh-precentral                  99.4531    10.2351    64.0000   135.0000    71.0000 
    88. 

  88.  24 3025      5335     5431.1  wm-lh-precuneus                  102.3829     9.0829    53.0000   135.0000    82.0000 
    89. 

  89.  25 3026      2546     2562.8  wm-lh-rostralanteriorcingulate   104.9458    12.0532    55.0000   144.0000    89.0000 
    90. 

  90.  26 3027      7534     7586.8  wm-lh-rostralmiddlefrontal       102.3646    10.6356    51.0000   144.0000    93.0000 
    91. 

  91.  27 3028     12719    13116.8  wm-lh-superiorfrontal            101.8585    10.9770    64.0000   149.0000    85.0000 
    92. 

  92.  28 3029      6460     6878.5  wm-lh-superiorparietal            99.8242     9.6487    72.0000   137.0000    65.0000 
    93. 

  93.  29 3030      5977     6391.2  wm-lh-superiortemporal            99.9271     9.7239    59.0000   136.0000    77.0000 
    94. 

  94.  30 3031      5360     5619.0  wm-lh-supramarginal              103.5737    10.2528    70.0000   141.0000    71.0000 
    95. 

  95.  31 3032       277      303.3  wm-lh-frontalpole                104.3646     8.9593    77.0000   130.0000    53.0000 
    96. 

  96.  32 3033       776      828.8  wm-lh-temporalpole                97.1907     9.7128    72.0000   133.0000    61.0000 
    97. 

  97.  33 3034       875      877.1  wm-lh-transversetemporal         100.4537     8.6415    79.0000   128.0000    49.0000 
    98. 

  98.  34 3035      7488     7538.7  wm-lh-insula                      93.5219    11.7999    36.0000   130.0000    94.0000 
    99. 

  99.  35 4001      1669     1699.6  wm-rh-bankssts                   101.4152     8.0842    81.0000   134.0000    53.0000 
    100. 

  100.  36 4002      2237     2203.7  wm-rh-caudalanteriorcingulate     92.7626    14.5462    45.0000   142.0000    97.0000 
    101. 

  101.  37 4003      3825     3908.7  wm-rh-caudalmiddlefrontal         99.4418     8.6074    76.0000   127.0000    51.0000 
    102. 

  102.  38 4005      1461     1520.6  wm-rh-cuneus                      96.8761    10.0913    59.0000   129.0000    70.0000 
    103. 

  103.  39 4006       312      410.5  wm-rh-entorhinal                  80.8910    15.6251    13.0000   125.0000   112.0000 
    104. 

  104.  40 4007      3420     3614.7  wm-rh-fusiform                    94.5646     9.4129    40.0000   126.0000    86.0000 
    105. 

  105.  41 4008      6144     6518.0  wm-rh-inferiorparietal           101.6702     8.5030    74.0000   140.0000    66.0000 
    106. 

  106.  42 4009      3031     3279.8  wm-rh-inferiortemporal            94.1683     8.4817    70.0000   125.0000    55.0000 
    107. 

  107.  43 4010      3047     3135.1  wm-rh-isthmuscingulate           106.4631    12.1989    32.0000   149.0000   117.0000 
    108. 

  108.  44 4011      5257     5465.7  wm-rh-lateraloccipital            96.8640     9.2170    64.0000   131.0000    67.0000 
    109. 

  109.  45 4012      4907     5081.5  wm-rh-lateralorbitofrontal        97.4296    12.6561    43.0000   135.0000    92.0000 
    110. 

  110.  46 4013      3730     3943.3  wm-rh-lingual                     94.6971    10.6770    47.0000   131.0000    84.0000 
    111. 

  111.  47 4014      3745     3811.1  wm-rh-medialorbitofrontal         98.1418    11.5481    40.0000   137.0000    97.0000 
    112. 

  112.  48 4015      3419     3741.0  wm-rh-middletemporal              95.1881     8.2940    67.0000   130.0000    63.0000 
    113. 

  113.  49 4016       756      857.2  wm-rh-parahippocampal             90.7355     9.7241    42.0000   115.0000    73.0000 
    114. 

  114.  50 4017      2882     2985.5  wm-rh-paracentral                 98.5999     7.8016    73.0000   126.0000    53.0000 
    115. 

  115.  51 4018      1653     1793.7  wm-rh-parsopercularis             99.6413     8.6161    78.0000   126.0000    48.0000 
    116. 

  116.  52 4019       848      869.1  wm-rh-parsorbitalis              102.4304     9.8922    75.0000   128.0000    53.0000 
    117. 

  117.  53 4020      1974     2013.5  wm-rh-parstriangularis           103.2072     9.3124    77.0000   136.0000    59.0000 
    118. 

  118.  54 4021      2017     1967.8  wm-rh-pericalcarine               97.1815    10.1948    52.0000   128.0000    76.0000 
    119. 

  119.  55 4022      4777     4978.0  wm-rh-postcentral                 99.5263     9.3104    60.0000   131.0000    71.0000 
    120. 

  120.  56 4023      3413     3410.3  wm-rh-posteriorcingulate          96.5836    13.5142    40.0000   138.0000    98.0000 
    121. 

  121.  57 4024      7604     7899.3  wm-rh-precentral                  97.4382     9.1372    62.0000   137.0000    75.0000 
    122. 

  122.  58 4025      5269     5420.8  wm-rh-precuneus                  103.4917     9.0540    54.0000   147.0000    93.0000 
    123. 

  123.  59 4026      1479     1466.1  wm-rh-rostralanteriorcingulate   103.0791    13.2015    42.0000   139.0000    97.0000 
    124. 

  124.  60 4027      8839     8996.6  wm-rh-rostralmiddlefrontal       100.3197     9.3783    66.0000   137.0000    71.0000 
    125. 

  125.  61 4028     10686    11096.0  wm-rh-superiorfrontal             97.2752     9.2353    66.0000   139.0000    73.0000 
    126. 

  126.  62 4029      6329     6663.2  wm-rh-superiorparietal           101.2000     8.5442    70.0000   137.0000    67.0000 
    127. 

  127.  63 4030      4219     4614.3  wm-rh-superiortemporal            96.1505     8.8766    58.0000   135.0000    77.0000 
    128. 

  128.  64 4031      5392     5581.3  wm-rh-supramarginal              103.2971     9.8823    68.0000   138.0000    70.0000 
    129. 

  129.  65 4032       418      436.1  wm-rh-frontalpole                 99.8684     7.8333    84.0000   130.0000    46.0000 
    130. 

  130.  66 4033       519      574.5  wm-rh-temporalpole                87.0925     9.4848    54.0000   116.0000    62.0000 
    131. 

  131.  67 4034       638      636.2  wm-rh-transversetemporal          99.0251     7.0777    81.0000   125.0000    44.0000 
    132. 

  132.  68 4035      6974     7218.2  wm-rh-insula                      94.3939    10.5682    26.0000   129.0000   103.0000 
    133. 

  133.  69 5001     19539    19251.6  Left-UnsegmentedWhiteMatter       98.9863    13.5353     1.0000   138.0000   137.0000 
    134. 

  134.  70 5002     18729    18494.0  Right-UnsegmentedWhiteMatter      95.0645    12.4006    21.0000   138.0000   117.0000 
    135.