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ABIDE_fs-6.0.0
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0050059
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050059 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-907
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050059
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 8240.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 267311.910481, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 263497.824271, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 530809.734753, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1746919.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1657980.114305, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:38:56 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 18:56:27 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 18:56:27 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2773     2714.3  wm-lh-bankssts                   100.2990     7.4712    77.0000   118.0000    41.0000 
    66. 

  66.   2 3002      3156     3146.6  wm-lh-caudalanteriorcingulate    101.3837     7.2109    65.0000   129.0000    64.0000 
    67. 

  67.   3 3003      8473     8456.9  wm-lh-caudalmiddlefrontal         96.5808     6.7718    73.0000   110.0000    37.0000 
    68. 

  68.   4 3005      2730     2694.2  wm-lh-cuneus                      93.4842     8.1426    52.0000   113.0000    61.0000 
    69. 

  69.   5 3006       630      679.0  wm-lh-entorhinal                  82.0968     7.5015    55.0000   110.0000    55.0000 
    70. 

  70.   6 3007      9161     9089.1  wm-lh-fusiform                    92.2561     9.1254    55.0000   115.0000    60.0000 
    71. 

  71.   7 3008     11562    11690.8  wm-lh-inferiorparietal           100.5406     8.0537    74.0000   119.0000    45.0000 
    72. 

  72.   8 3009      7080     7162.2  wm-lh-inferiortemporal            90.1336     9.3024    64.0000   119.0000    55.0000 
    73. 

  73.   9 3010      3421     3421.5  wm-lh-isthmuscingulate            99.8232     7.7497    48.0000   114.0000    66.0000 
    74. 

  74.  10 3011     10121    10154.4  wm-lh-lateraloccipital            94.8303     8.5136    71.0000   119.0000    48.0000 
    75. 

  75.  11 3012      8303     8213.4  wm-lh-lateralorbitofrontal        98.1049     8.0041    70.0000   116.0000    46.0000 
    76. 

  76.  12 3013      6381     6429.9  wm-lh-lingual                     90.6117     8.2351    48.0000   110.0000    62.0000 
    77. 

  77.  13 3014      3857     3794.0  wm-lh-medialorbitofrontal         97.6173     9.1798    62.0000   124.0000    62.0000 
    78. 

  78.  14 3015      6970     7190.9  wm-lh-middletemporal              94.1185     8.6263    67.0000   117.0000    50.0000 
    79. 

  79.  15 3016      1452     1521.3  wm-lh-parahippocampal             89.2307     9.3363    64.0000   111.0000    47.0000 
    80. 

  80.  16 3017      5062     4973.2  wm-lh-paracentral                 93.7270     7.3119    70.0000   109.0000    39.0000 
    81. 

  81.  17 3018      4478     4485.2  wm-lh-parsopercularis             98.7180     7.1489    77.0000   112.0000    35.0000 
    82. 

  82.  18 3019      1383     1406.8  wm-lh-parsorbitalis               96.2755     8.2489    76.0000   113.0000    37.0000 
    83. 

  83.  19 3020      3489     3450.8  wm-lh-parstriangularis            97.3700     7.7965    75.0000   112.0000    37.0000 
    84. 

  84.  20 3021      3078     2904.0  wm-lh-pericalcarine               91.5234     7.8404    28.0000   110.0000    82.0000 
    85. 

  85.  21 3022      8846     9022.3  wm-lh-postcentral                 95.4011     8.3446    70.0000   122.0000    52.0000 
    86. 

  86.  22 3023      4111     4054.9  wm-lh-posteriorcingulate          98.3452     8.5256    47.0000   113.0000    66.0000 
    87. 

  87.  23 3024     15306    15367.9  wm-lh-precentral                  95.8817     6.8266    71.0000   119.0000    48.0000 
    88. 

  88.  24 3025     13829    13602.5  wm-lh-precuneus                   98.8064     7.9540    27.0000   115.0000    88.0000 
    89. 

  89.  25 3026      2616     2465.8  wm-lh-rostralanteriorcingulate    96.5417    11.9722    37.0000   131.0000    94.0000 
    90. 

  90.  26 3027     15184    15282.3  wm-lh-rostralmiddlefrontal        96.6448     8.0472    68.0000   114.0000    46.0000 
    91. 

  91.  27 3028     24391    24327.1  wm-lh-superiorfrontal             95.1916     7.1706    69.0000   112.0000    43.0000 
    92. 

  92.  28 3029     13749    14009.2  wm-lh-superiorparietal            97.2603     8.0671    71.0000   115.0000    44.0000 
    93. 

  93.  29 3030      8935     9233.0  wm-lh-superiortemporal            96.8302     8.4818    72.0000   122.0000    50.0000 
    94. 

  94.  30 3031      9550     9636.0  wm-lh-supramarginal              101.5151     7.6688    76.0000   120.0000    44.0000 
    95. 

  95.  31 3032       321      315.6  wm-lh-frontalpole                 92.0374     8.3231    74.0000   110.0000    36.0000 
    96. 

  96.  32 3033       744      781.7  wm-lh-temporalpole                83.4624     7.4542    65.0000   100.0000    35.0000 
    97. 

  97.  33 3034      1422     1316.1  wm-lh-transversetemporal          97.4191     8.1769    59.0000   113.0000    54.0000 
    98. 

  98.  34 3035     13731    13350.6  wm-lh-insula                      94.8483     9.4164    35.0000   121.0000    86.0000 
    99. 

  99.  35 4001      2999     2906.4  wm-rh-bankssts                    99.5305     6.8057    78.0000   116.0000    38.0000 
    100. 

  100.  36 4002      2987     2914.7  wm-rh-caudalanteriorcingulate     98.9692     8.2529    74.0000   121.0000    47.0000 
    101. 

  101.  37 4003      7864     7907.3  wm-rh-caudalmiddlefrontal         96.2747     7.1112    73.0000   111.0000    38.0000 
    102. 

  102.  38 4005      2845     2794.3  wm-rh-cuneus                      94.0450     8.0941    73.0000   117.0000    44.0000 
    103. 

  103.  39 4006       779      845.1  wm-rh-entorhinal                  84.3338     7.0703    69.0000   116.0000    47.0000 
    104. 

  104.  40 4007      7616     7675.2  wm-rh-fusiform                    92.3271     8.1660    68.0000   115.0000    47.0000 
    105. 

  105.  41 4008     10732    10943.4  wm-rh-inferiorparietal            99.7415     7.7974    76.0000   120.0000    44.0000 
    106. 

  106.  42 4009      6397     6519.3  wm-rh-inferiortemporal            91.6517     9.2818    62.0000   114.0000    52.0000 
    107. 

  107.  43 4010      3270     3266.9  wm-rh-isthmuscingulate            99.1428     7.4302    48.0000   113.0000    65.0000 
    108. 

  108.  44 4011      9899    10038.5  wm-rh-lateraloccipital            96.9808     7.9209    72.0000   123.0000    51.0000 
    109. 

  109.  45 4012      7901     7791.8  wm-rh-lateralorbitofrontal        96.6683     8.8367    68.0000   113.0000    45.0000 
    110. 

  110.  46 4013      6013     5985.4  wm-rh-lingual                     90.3783     7.9421    48.0000   113.0000    65.0000 
    111. 

  111.  47 4014      4834     4741.2  wm-rh-medialorbitofrontal         96.0374     9.4300    57.0000   121.0000    64.0000 
    112. 

  112.  48 4015      6700     6922.0  wm-rh-middletemporal              92.7294     8.9753    68.0000   119.0000    51.0000 
    113. 

  113.  49 4016      1691     1718.5  wm-rh-parahippocampal             88.1833     7.7711    60.0000   111.0000    51.0000 
    114. 

  114.  50 4017      6152     6081.6  wm-rh-paracentral                 93.9771     6.9328    71.0000   110.0000    39.0000 
    115. 

  115.  51 4018      3620     3555.3  wm-rh-parsopercularis             98.9343     7.0765    74.0000   111.0000    37.0000 
    116. 

  116.  52 4019      1589     1588.9  wm-rh-parsorbitalis               95.2366     8.4646    73.0000   113.0000    40.0000 
    117. 

  117.  53 4020      3297     3270.5  wm-rh-parstriangularis            98.7847     7.9437    75.0000   116.0000    41.0000 
    118. 

  118.  54 4021      3162     2991.2  wm-rh-pericalcarine               92.6695     8.2194    55.0000   117.0000    62.0000 
    119. 

  119.  55 4022      9586     9824.4  wm-rh-postcentral                 94.8958     7.8213    70.0000   127.0000    57.0000 
    120. 

  120.  56 4023      5469     5357.7  wm-rh-posteriorcingulate          97.0148     8.4173    49.0000   118.0000    69.0000 
    121. 

  121.  57 4024     17355    17388.1  wm-rh-precentral                  95.1166     6.6014    71.0000   112.0000    41.0000 
    122. 

  122.  58 4025     15089    14779.6  wm-rh-precuneus                   97.3322     7.6787    56.0000   116.0000    60.0000 
    123. 

  123.  59 4026      2251     2144.1  wm-rh-rostralanteriorcingulate   100.7215     8.5929    63.0000   121.0000    58.0000 
    124. 

  124.  60 4027     13014    13033.8  wm-rh-rostralmiddlefrontal        98.6134     8.2464    73.0000   115.0000    42.0000 
    125. 

  125.  61 4028     22528    22528.8  wm-rh-superiorfrontal             95.5363     7.4621    67.0000   114.0000    47.0000 
    126. 

  126.  62 4029     12740    12999.4  wm-rh-superiorparietal            96.7363     7.8292    69.0000   121.0000    52.0000 
    127. 

  127.  63 4030      8103     8370.7  wm-rh-superiortemporal            95.1179     8.2489    69.0000   118.0000    49.0000 
    128. 

  128.  64 4031     11781    11854.4  wm-rh-supramarginal              100.0306     7.0759    62.0000   117.0000    55.0000 
    129. 

  129.  65 4032       369      374.6  wm-rh-frontalpole                 93.3984     8.4497    76.0000   111.0000    35.0000 
    130. 

  130.  66 4033       666      721.2  wm-rh-temporalpole                83.7417     6.4110    68.0000   102.0000    34.0000 
    131. 

  131.  67 4034       714      672.9  wm-rh-transversetemporal          94.1527     7.0506    76.0000   117.0000    41.0000 
    132. 

  132.  68 4035     12034    11743.9  wm-rh-insula                      93.8574     9.1871    38.0000   120.0000    82.0000 
    133. 

  133.  69 5001     29464    29314.6  Left-UnsegmentedWhiteMatter       98.5232    10.5013    26.0000   119.0000    93.0000 
    134. 

  134.  70 5002     29605    29566.4  Right-UnsegmentedWhiteMatter      98.9100     8.8047    30.0000   117.0000    87.0000 
    135.