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ABIDE_fs-6.0.0
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0050022
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050022 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-907
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050022
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 12430.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 245816.357875, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 243460.521789, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 489276.879663, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1814830.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1781478.479039, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 02:52:56 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 18:45:04 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 18:45:04 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3394     3413.0  wm-lh-bankssts                    98.4275     6.8439    75.0000   115.0000    40.0000 
    66. 

  66.   2 3002      2874     2840.2  wm-lh-caudalanteriorcingulate     98.7571     8.0554    51.0000   112.0000    61.0000 
    67. 

  67.   3 3003      5912     5893.2  wm-lh-caudalmiddlefrontal         98.5304     7.2406    76.0000   116.0000    40.0000 
    68. 

  68.   4 3005      2746     2730.2  wm-lh-cuneus                      95.0204     8.1809    70.0000   125.0000    55.0000 
    69. 

  69.   5 3006       790      828.5  wm-lh-entorhinal                  79.3532     5.9685    63.0000    97.0000    34.0000 
    70. 

  70.   6 3007      6299     6360.2  wm-lh-fusiform                    89.8605     8.1137    49.0000   112.0000    63.0000 
    71. 

  71.   7 3008      9812     9958.3  wm-lh-inferiorparietal            98.6392     7.5838    74.0000   118.0000    44.0000 
    72. 

  72.   8 3009      6200     6266.2  wm-lh-inferiortemporal            90.8632     9.1263    64.0000   112.0000    48.0000 
    73. 

  73.   9 3010      4467     4443.5  wm-lh-isthmuscingulate            95.9033     7.6154    52.0000   110.0000    58.0000 
    74. 

  74.  10 3011      9824    10214.8  wm-lh-lateraloccipital            94.0562     9.0051    66.0000   127.0000    61.0000 
    75. 

  75.  11 3012      7083     7208.5  wm-lh-lateralorbitofrontal        99.0501     8.6713    69.0000   118.0000    49.0000 
    76. 

  76.  12 3013      6867     6868.6  wm-lh-lingual                     86.7737     9.8780    28.0000   112.0000    84.0000 
    77. 

  77.  13 3014      3158     3105.2  wm-lh-medialorbitofrontal         96.2641     9.6204    72.0000   116.0000    44.0000 
    78. 

  78.  14 3015      5356     5621.9  wm-lh-middletemporal              92.4543     8.0369    68.0000   110.0000    42.0000 
    79. 

  79.  15 3016      1546     1637.1  wm-lh-parahippocampal             88.6235     8.1755    68.0000   111.0000    43.0000 
    80. 

  80.  16 3017      4498     4476.4  wm-lh-paracentral                 96.8924     6.5966    74.0000   113.0000    39.0000 
    81. 

  81.  17 3018      4431     4466.0  wm-lh-parsopercularis             99.4863     7.7453    78.0000   116.0000    38.0000 
    82. 

  82.  18 3019       996     1006.4  wm-lh-parsorbitalis               96.5532     8.4610    77.0000   120.0000    43.0000 
    83. 

  83.  19 3020      4105     4128.9  wm-lh-parstriangularis           101.7449     7.2674    79.0000   120.0000    41.0000 
    84. 

  84.  20 3021      4284     4175.5  wm-lh-pericalcarine               92.8599     9.0751    37.0000   127.0000    90.0000 
    85. 

  85.  21 3022      7973     8146.0  wm-lh-postcentral                 97.5072     7.6977    73.0000   118.0000    45.0000 
    86. 

  86.  22 3023      5103     4980.5  wm-lh-posteriorcingulate          96.5505     8.8595    41.0000   111.0000    70.0000 
    87. 

  87.  23 3024     13849    14056.9  wm-lh-precentral                  98.7022     6.8881    74.0000   117.0000    43.0000 
    88. 

  88.  24 3025      9524     9518.8  wm-lh-precuneus                   94.7394     9.7093    27.0000   116.0000    89.0000 
    89. 

  89.  25 3026      3192     3029.2  wm-lh-rostralanteriorcingulate    96.7005    13.1511    42.0000   113.0000    71.0000 
    90. 

  90.  26 3027     14596    14690.9  wm-lh-rostralmiddlefrontal        97.7460     8.8550    72.0000   118.0000    46.0000 
    91. 

  91.  27 3028     20260    20354.4  wm-lh-superiorfrontal             94.7891     7.7487    71.0000   114.0000    43.0000 
    92. 

  92.  28 3029     12432    12693.9  wm-lh-superiorparietal            98.8093     7.3941    72.0000   117.0000    45.0000 
    93. 

  93.  29 3030      8379     8654.7  wm-lh-superiortemporal            94.9001     7.9156    70.0000   113.0000    43.0000 
    94. 

  94.  30 3031     10629    10834.4  wm-lh-supramarginal               99.7560     7.8407    75.0000   118.0000    43.0000 
    95. 

  95.  31 3032       268      263.6  wm-lh-frontalpole                 89.3545     7.5846    76.0000   108.0000    32.0000 
    96. 

  96.  32 3033       752      783.1  wm-lh-temporalpole                79.1915     6.8831    64.0000    99.0000    35.0000 
    97. 

  97.  33 3034       817      789.0  wm-lh-transversetemporal          94.6989     6.6939    78.0000   109.0000    31.0000 
    98. 

  98.  34 3035     11409    11191.6  wm-lh-insula                      92.8595     9.6885    35.0000   113.0000    78.0000 
    99. 

  99.  35 4001      2625     2617.4  wm-rh-bankssts                    98.3036     6.5430    77.0000   114.0000    37.0000 
    100. 

  100.  36 4002      3370     3272.4  wm-rh-caudalanteriorcingulate     97.3243     9.3735    43.0000   114.0000    71.0000 
    101. 

  101.  37 4003      6497     6519.3  wm-rh-caudalmiddlefrontal         97.3986     7.3592    73.0000   113.0000    40.0000 
    102. 

  102.  38 4005      2750     2678.5  wm-rh-cuneus                      92.8800     7.8778    71.0000   116.0000    45.0000 
    103. 

  103.  39 4006       766      782.6  wm-rh-entorhinal                  82.1880     8.7120    58.0000   107.0000    49.0000 
    104. 

  104.  40 4007      6987     6950.1  wm-rh-fusiform                    89.4855     8.4469    54.0000   110.0000    56.0000 
    105. 

  105.  41 4008     11793    12126.8  wm-rh-inferiorparietal            98.4643     7.2118    72.0000   117.0000    45.0000 
    106. 

  106.  42 4009      5718     5896.0  wm-rh-inferiortemporal            91.3293     8.8572    68.0000   122.0000    54.0000 
    107. 

  107.  43 4010      3106     3136.9  wm-rh-isthmuscingulate            95.1355     6.7582    59.0000   107.0000    48.0000 
    108. 

  108.  44 4011     12235    12512.7  wm-rh-lateraloccipital            92.8468     8.9071    63.0000   121.0000    58.0000 
    109. 

  109.  45 4012      7395     7251.8  wm-rh-lateralorbitofrontal        94.3209    10.7207    30.0000   118.0000    88.0000 
    110. 

  110.  46 4013      7080     7084.6  wm-rh-lingual                     88.3877     8.0724    52.0000   114.0000    62.0000 
    111. 

  111.  47 4014      4487     4452.4  wm-rh-medialorbitofrontal         94.3310    12.2374    28.0000   117.0000    89.0000 
    112. 

  112.  48 4015      6138     6378.4  wm-rh-middletemporal              93.8923     8.1398    70.0000   114.0000    44.0000 
    113. 

  113.  49 4016      1436     1483.2  wm-rh-parahippocampal             88.9436     7.4584    69.0000   110.0000    41.0000 
    114. 

  114.  50 4017      6761     6705.9  wm-rh-paracentral                 96.6007     6.4760    76.0000   112.0000    36.0000 
    115. 

  115.  51 4018      3937     3883.6  wm-rh-parsopercularis             99.2649     7.2100    77.0000   114.0000    37.0000 
    116. 

  116.  52 4019      1311     1336.1  wm-rh-parsorbitalis               96.5088     9.3463    75.0000   117.0000    42.0000 
    117. 

  117.  53 4020      3865     3898.6  wm-rh-parstriangularis            99.2988     7.9792    76.0000   117.0000    41.0000 
    118. 

  118.  54 4021      4310     4109.8  wm-rh-pericalcarine               90.6090     7.4742    68.0000   116.0000    48.0000 
    119. 

  119.  55 4022      7905     8138.8  wm-rh-postcentral                 98.4431     7.3468    77.0000   117.0000    40.0000 
    120. 

  120.  56 4023      4759     4629.7  wm-rh-posteriorcingulate          94.7081     7.6843    45.0000   110.0000    65.0000 
    121. 

  121.  57 4024     12564    12715.0  wm-rh-precentral                  97.3995     6.7502    73.0000   115.0000    42.0000 
    122. 

  122.  58 4025      9038     8995.9  wm-rh-precuneus                   94.7371     7.4212    71.0000   112.0000    41.0000 
    123. 

  123.  59 4026      2123     2053.5  wm-rh-rostralanteriorcingulate    96.5718    10.0074    59.0000   115.0000    56.0000 
    124. 

  124.  60 4027     15284    15475.1  wm-rh-rostralmiddlefrontal        97.5071     8.8257    71.0000   118.0000    47.0000 
    125. 

  125.  61 4028     21208    21141.7  wm-rh-superiorfrontal             94.3560     7.8691    70.0000   113.0000    43.0000 
    126. 

  126.  62 4029     10423    10786.7  wm-rh-superiorparietal            99.3078     7.3465    66.0000   116.0000    50.0000 
    127. 

  127.  63 4030      6197     6375.2  wm-rh-superiortemporal            94.8999     8.3943    68.0000   116.0000    48.0000 
    128. 

  128.  64 4031      8674     8758.9  wm-rh-supramarginal              101.5296     7.5024    69.0000   122.0000    53.0000 
    129. 

  129.  65 4032       315      310.3  wm-rh-frontalpole                 90.9619     7.2163    75.0000   112.0000    37.0000 
    130. 

  130.  66 4033       847      885.9  wm-rh-temporalpole                81.3695     6.7676    64.0000   100.0000    36.0000 
    131. 

  131.  67 4034       766      730.1  wm-rh-transversetemporal          95.7454     6.6016    77.0000   109.0000    32.0000 
    132. 

  132.  68 4035      9838     9684.5  wm-rh-insula                      92.3400     9.2532    54.0000   110.0000    56.0000 
    133. 

  133.  69 5001     30478    30167.4  Left-UnsegmentedWhiteMatter       97.4604     9.2279    12.0000   117.0000   105.0000 
    134. 

  134.  70 5002     29968    29724.5  Right-UnsegmentedWhiteMatter      96.5080     9.3860    23.0000   113.0000    90.0000 
    135.