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ABIDE_fs-6.0.0
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0051292
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051292 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-544
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051292
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 10259.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 177675.598552, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 179287.647333, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 356963.245886, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1444296.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1375511.828487, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 07:46:27 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 23:55:10 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 23:55:10 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2092     2110.0  wm-lh-bankssts                    99.5760     8.4948    67.0000   126.0000    59.0000 
    66. 

  66.   2 3002      1698     1681.7  wm-lh-caudalanteriorcingulate    101.9847     9.6994    55.0000   122.0000    67.0000 
    67. 

  67.   3 3003      5427     5411.7  wm-lh-caudalmiddlefrontal         98.4629    10.3651    57.0000   121.0000    64.0000 
    68. 

  68.   4 3005      2101     2118.8  wm-lh-cuneus                      93.8782    11.4935    65.0000   120.0000    55.0000 
    69. 

  69.   5 3006       762      803.4  wm-lh-entorhinal                  73.5853     8.8135    55.0000    93.0000    38.0000 
    70. 

  70.   6 3007      5408     5355.3  wm-lh-fusiform                    89.5938    12.0367    56.0000   124.0000    68.0000 
    71. 

  71.   7 3008      6986     7255.5  wm-lh-inferiorparietal            98.2552    10.5235    67.0000   129.0000    62.0000 
    72. 

  72.   8 3009      4952     5094.7  wm-lh-inferiortemporal            87.9594    12.1513    55.0000   115.0000    60.0000 
    73. 

  73.   9 3010      3082     3113.4  wm-lh-isthmuscingulate            98.7680     9.1334    50.0000   119.0000    69.0000 
    74. 

  74.  10 3011      9153     9534.4  wm-lh-lateraloccipital            97.3202    10.7862    63.0000   128.0000    65.0000 
    75. 

  75.  11 3012      4512     4508.0  wm-lh-lateralorbitofrontal        98.1933    12.0773    60.0000   129.0000    69.0000 
    76. 

  76.  12 3013      5295     5293.2  wm-lh-lingual                     88.5855    11.8478    33.0000   116.0000    83.0000 
    77. 

  77.  13 3014      2797     2757.1  wm-lh-medialorbitofrontal         97.2917    12.1206    62.0000   129.0000    67.0000 
    78. 

  78.  14 3015      4782     4919.1  wm-lh-middletemporal              90.2346    11.9556    56.0000   115.0000    59.0000 
    79. 

  79.  15 3016      1257     1352.7  wm-lh-parahippocampal             82.5895     8.9072    58.0000   108.0000    50.0000 
    80. 

  80.  16 3017      3363     3352.7  wm-lh-paracentral                 93.5079     9.3520    66.0000   115.0000    49.0000 
    81. 

  81.  17 3018      2723     2738.6  wm-lh-parsopercularis            101.5465    11.8193    66.0000   127.0000    61.0000 
    82. 

  82.  18 3019       729      751.5  wm-lh-parsorbitalis               93.1578    11.8134    66.0000   124.0000    58.0000 
    83. 

  83.  19 3020      2636     2662.4  wm-lh-parstriangularis           101.2215    11.1526    67.0000   134.0000    67.0000 
    84. 

  84.  20 3021      3134     2848.6  wm-lh-pericalcarine               92.9084    11.5046    39.0000   120.0000    81.0000 
    85. 

  85.  21 3022      5948     6149.9  wm-lh-postcentral                 93.1972    10.8982    61.0000   120.0000    59.0000 
    86. 

  86.  22 3023      3403     3366.1  wm-lh-posteriorcingulate          98.1816    10.5687    38.0000   120.0000    82.0000 
    87. 

  87.  23 3024      9552     9714.5  wm-lh-precentral                  97.5650    10.8082    68.0000   131.0000    63.0000 
    88. 

  88.  24 3025      6670     6660.5  wm-lh-precuneus                   95.9610    11.1239    39.0000   123.0000    84.0000 
    89. 

  89.  25 3026      1917     1896.4  wm-lh-rostralanteriorcingulate   106.9624    10.8180    68.0000   126.0000    58.0000 
    90. 

  90.  26 3027      9055     9101.6  wm-lh-rostralmiddlefrontal        97.8044    11.1597    65.0000   127.0000    62.0000 
    91. 

  91.  27 3028     13023    13213.1  wm-lh-superiorfrontal             93.1017    11.3456    59.0000   125.0000    66.0000 
    92. 

  92.  28 3029      9304     9658.9  wm-lh-superiorparietal            97.4078    10.8535    64.0000   123.0000    59.0000 
    93. 

  93.  29 3030      6019     6367.5  wm-lh-superiortemporal            91.9914    11.0316    59.0000   118.0000    59.0000 
    94. 

  94.  30 3031      5730     5861.5  wm-lh-supramarginal              100.6658    11.2659    68.0000   127.0000    59.0000 
    95. 

  95.  31 3032       223      229.8  wm-lh-frontalpole                 81.5740     7.9985    68.0000   104.0000    36.0000 
    96. 

  96.  32 3033       560      603.0  wm-lh-temporalpole                73.2929     7.6892    52.0000    96.0000    44.0000 
    97. 

  97.  33 3034       609      602.5  wm-lh-transversetemporal          94.4680     8.7513    69.0000   117.0000    48.0000 
    98. 

  98.  34 3035      8024     7993.4  wm-lh-insula                      94.0497    12.7207    39.0000   130.0000    91.0000 
    99. 

  99.  35 4001      2520     2530.7  wm-rh-bankssts                   100.3333     7.7968    73.0000   117.0000    44.0000 
    100. 

  100.  36 4002      2367     2371.2  wm-rh-caudalanteriorcingulate    105.8082    11.6674    47.0000   131.0000    84.0000 
    101. 

  101.  37 4003      4447     4449.7  wm-rh-caudalmiddlefrontal         95.6730    11.0258    62.0000   119.0000    57.0000 
    102. 

  102.  38 4005      1883     1861.5  wm-rh-cuneus                      86.8927     9.9475    63.0000   112.0000    49.0000 
    103. 

  103.  39 4006       484      529.5  wm-rh-entorhinal                  75.7521     8.0297    55.0000   102.0000    47.0000 
    104. 

  104.  40 4007      5319     5277.7  wm-rh-fusiform                    90.2952    11.1519    53.0000   116.0000    63.0000 
    105. 

  105.  41 4008      9700     9888.6  wm-rh-inferiorparietal            97.3363    10.7576    66.0000   127.0000    61.0000 
    106. 

  106.  42 4009      4310     4406.2  wm-rh-inferiortemporal            90.4710    11.9266    57.0000   114.0000    57.0000 
    107. 

  107.  43 4010      2739     2747.8  wm-rh-isthmuscingulate            97.8613     8.9619    44.0000   125.0000    81.0000 
    108. 

  108.  44 4011      9391     9732.5  wm-rh-lateraloccipital            89.6514    11.0227    58.0000   116.0000    58.0000 
    109. 

  109.  45 4012      5122     5094.7  wm-rh-lateralorbitofrontal        95.5947    13.3736    58.0000   131.0000    73.0000 
    110. 

  110.  46 4013      5582     5439.5  wm-rh-lingual                     84.6111    12.5306    39.0000   115.0000    76.0000 
    111. 

  111.  47 4014      2889     2941.0  wm-rh-medialorbitofrontal         96.9668    12.8372    59.0000   127.0000    68.0000 
    112. 

  112.  48 4015      5069     5353.2  wm-rh-middletemporal              92.3316    12.1403    56.0000   119.0000    63.0000 
    113. 

  113.  49 4016      1585     1621.9  wm-rh-parahippocampal             85.7678     9.2642    49.0000   112.0000    63.0000 
    114. 

  114.  50 4017      4329     4255.6  wm-rh-paracentral                 94.1194    10.2606    62.0000   114.0000    52.0000 
    115. 

  115.  51 4018      2426     2435.6  wm-rh-parsopercularis             93.0474    12.3786    62.0000   119.0000    57.0000 
    116. 

  116.  52 4019       980      986.0  wm-rh-parsorbitalis               93.2265    12.3883    63.0000   129.0000    66.0000 
    117. 

  117.  53 4020      2506     2587.3  wm-rh-parstriangularis            98.0283    11.3721    65.0000   125.0000    60.0000 
    118. 

  118.  54 4021      2942     2791.6  wm-rh-pericalcarine               88.1992    10.4707    52.0000   112.0000    60.0000 
    119. 

  119.  55 4022      5628     5772.7  wm-rh-postcentral                 90.2216    10.9487    63.0000   119.0000    56.0000 
    120. 

  120.  56 4023      3824     3791.3  wm-rh-posteriorcingulate          98.6216    10.4139    43.0000   120.0000    77.0000 
    121. 

  121.  57 4024      9587     9648.7  wm-rh-precentral                  93.8438    10.3922    62.0000   117.0000    55.0000 
    122. 

  122.  58 4025      6957     6952.2  wm-rh-precuneus                   94.3990    10.3658    63.0000   119.0000    56.0000 
    123. 

  123.  59 4026      1738     1731.6  wm-rh-rostralanteriorcingulate   107.5408    12.5883    62.0000   135.0000    73.0000 
    124. 

  124.  60 4027      9369     9434.0  wm-rh-rostralmiddlefrontal       102.2524    11.8537    66.0000   138.0000    72.0000 
    125. 

  125.  61 4028     12604    12750.6  wm-rh-superiorfrontal             97.4877    12.4468    57.0000   135.0000    78.0000 
    126. 

  126.  62 4029      8990     9253.7  wm-rh-superiorparietal            94.6773    10.9746    64.0000   120.0000    56.0000 
    127. 

  127.  63 4030      4568     4901.7  wm-rh-superiortemporal            91.5201    11.3532    58.0000   116.0000    58.0000 
    128. 

  128.  64 4031      6595     6738.1  wm-rh-supramarginal              100.1318    10.9080    68.0000   129.0000    61.0000 
    129. 

  129.  65 4032       336      364.1  wm-rh-frontalpole                 92.8155    11.3501    70.0000   119.0000    49.0000 
    130. 

  130.  66 4033       668      735.5  wm-rh-temporalpole                74.2036     8.7927    56.0000    97.0000    41.0000 
    131. 

  131.  67 4034       469      459.0  wm-rh-transversetemporal          97.0853     7.7829    76.0000   113.0000    37.0000 
    132. 

  132.  68 4035      8619     8455.9  wm-rh-insula                      88.4830    13.7196    12.0000   120.0000   108.0000 
    133. 

  133.  69 5001     21917    21590.7  Left-UnsegmentedWhiteMatter       98.8791    11.5188    30.0000   128.0000    98.0000 
    134. 

  134.  70 5002     22274    22238.2  Right-UnsegmentedWhiteMatter      99.1921    10.9700    26.0000   132.0000   106.0000 
    135.