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stats
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lh.BA_exvivo.thresh.stats

lh.BA_exvivo.thresh.stats 4.3 KB
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  1. # Table of FreeSurfer cortical parcellation anatomical statistics 
    2. 

  2. # 
    3. 

  3. # CreationTime 2017/10/08-05:55:38-GMT
    4. 

  4. # generating_program mris_anatomical_stats
    5. 

  5. # cvs_version $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $
    6. 

  6. # mrisurf.c-cvs_version $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $
    7. 

  7. # cmdline mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.thresh.stats -b -a ./lh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab 0051292 lh white 
    8. 

  8. # sysname  Linux
    9. 

  9. # hostname tars-544
    10. 

  10. # machine  x86_64
    11. 

  11. # user     ntraut
    12. 

  12. # 
    13. 

  13. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    14. 

  14. # anatomy_type surface
    15. 

  15. # subjectname 0051292
    16. 

  16. # hemi lh
    17. 

  17. # AnnotationFile ./lh.BA_exvivo.thresh.annot
    18. 

  18. # AnnotationFileTimeStamp 2017/10/08 07:55:14
    19. 

  19. # Measure Cortex, NumVert, Number of Vertices, 111823, unitless
    20. 

  20. # Measure Cortex, WhiteSurfArea, White Surface Total Area, 78394.5, mm^2
    21. 

  21. # Measure BrainSeg, BrainSegVol, Brain Segmentation Volume, 1055110.000000, mm^3
    22. 

  22. # Measure BrainSegNotVent, BrainSegVolNotVent, Brain Segmentation Volume Without Ventricles, 1042292.000000, mm^3
    23. 

  23. # Measure BrainSegNotVentSurf, BrainSegVolNotVentSurf, Brain Segmentation Volume Without Ventricles from Surf, 1041958.617180, mm^3
    24. 

  24. # Measure Cortex, CortexVol Total cortical gray matter volume, 474209.371295, mm^3
    25. 

  25. # Measure SupraTentorial, SupraTentorialVol, Supratentorial volume, 902726.617180, mm^3
    26. 

  26. # Measure SupraTentorialNotVent, SupraTentorialVolNotVent, Supratentorial volume, 892467.617180, mm^3
    27. 

  27. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1375511.828487, mm^3
    28. 

  28. # NTableCols 10
    29. 

  29. # TableCol  1 ColHeader StructName
    30. 

  30. # TableCol  1 FieldName Structure Name
    31. 

  31. # TableCol  1 Units     NA
    32. 

  32. # TableCol  2 ColHeader NumVert
    33. 

  33. # TableCol  2 FieldName Number of Vertices
    34. 

  34. # TableCol  2 Units     unitless
    35. 

  35. # TableCol  3 ColHeader SurfArea
    36. 

  36. # TableCol  3 FieldName Surface Area
    37. 

  37. # TableCol  3 Units     mm^2
    38. 

  38. # TableCol  4 ColHeader GrayVol
    39. 

  39. # TableCol  4 FieldName Gray Matter Volume
    40. 

  40. # TableCol  4 Units     mm^3
    41. 

  41. # TableCol  5 ColHeader ThickAvg 
    42. 

  42. # TableCol  5 FieldName Average Thickness
    43. 

  43. # TableCol  5 Units     mm
    44. 

  44. # TableCol  6 ColHeader ThickStd
    45. 

  45. # TableCol  6 FieldName Thickness StdDev
    46. 

  46. # TableCol  6 Units     mm 
    47. 

  47. # TableCol  7 ColHeader MeanCurv
    48. 

  48. # TableCol  7 FieldName Integrated Rectified Mean Curvature
    49. 

  49. # TableCol  7 Units     mm^-1
    50. 

  50. # TableCol  8 ColHeader GausCurv 
    51. 

  51. # TableCol  8 FieldName Integrated Rectified Gaussian Curvature
    52. 

  52. # TableCol  8 Units     mm^-2
    53. 

  53. # TableCol  9 ColHeader  FoldInd
    54. 

  54. # TableCol  9 FieldName  Folding Index 
    55. 

  55. # TableCol  9 Units      unitless 
    56. 

  56. # TableCol 10 ColHeader CurvInd
    57. 

  57. # TableCol 10 FieldName Intrinsic Curvature Index
    58. 

  58. # TableCol 10 Units     unitless
    59. 

  59. # ColHeaders StructName NumVert SurfArea GrayVol ThickAvg ThickStd MeanCurv GausCurv FoldInd CurvInd
    60. 

  60. BA1_exvivo                                811    504   1514  2.263 0.896     0.162     0.054       14     1.9
    61. 

  61. BA2_exvivo                               1553   1047   2702  2.229 0.748     0.106     0.019       12     1.2
    62. 

  62. BA3a_exvivo                               710    468    750  2.171 0.436     0.132     0.030        6     0.8
    63. 

  63. BA3b_exvivo                              1191    839   1517  1.701 0.411     0.086     0.016        6     0.7
    64. 

  64. BA4a_exvivo                              1247    872   2864  2.961 0.551     0.104     0.023        8     1.2
    65. 

  65. BA4p_exvivo                               843    567   1304  2.475 0.365     0.093     0.020        4     0.6
    66. 

  66. BA6_exvivo                               4108   2828  10373  2.968 0.769     0.123     0.033       43     5.3
    67. 

  67. BA44_exvivo                              1056    763   2461  2.642 0.644     0.124     0.031       17     1.3
    68. 

  68. BA45_exvivo                               954    726   3734  3.418 0.805     0.153     0.044       14     1.8
    69. 

  69. V1_exvivo                                3287   2353   4299  1.787 0.510     0.138     0.034       39     4.8
    70. 

  70. V2_exvivo                                3736   2640   6467  2.313 0.608     0.159     0.044       56     6.5
    71. 

  71. MT_exvivo                                 658    453   1257  2.402 0.537     0.107     0.020        7     0.6
    72. 

  72. perirhinal_exvivo                         283    189    916  3.436 0.544     0.086     0.022        2     0.2
    73. 

  73. entorhinal_exvivo                         301    215    899  3.108 0.800     0.120     0.026        2     0.5
    74.