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reference-preprocessing
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ABIDE_fs-6.0.0
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ABIDE_fs-6.0.0
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0051280
/
stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051280 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-538
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051280
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 19004.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 188090.462571, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 189971.291115, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 378061.753686, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1563910.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1449500.492759, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 07:10:14 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 00:01:30 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 00:01:30 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2852     2889.8  wm-lh-bankssts                    99.2465     8.7387    68.0000   123.0000    55.0000 
    66. 

  66.   2 3002      2474     2442.1  wm-lh-caudalanteriorcingulate    104.7514    12.8842    28.0000   137.0000   109.0000 
    67. 

  67.   3 3003      5900     5866.0  wm-lh-caudalmiddlefrontal         96.5790    11.2845    59.0000   122.0000    63.0000 
    68. 

  68.   4 3005      2016     2048.7  wm-lh-cuneus                      96.9152    10.8603    70.0000   128.0000    58.0000 
    69. 

  69.   5 3006       809      898.3  wm-lh-entorhinal                  70.8022     7.6912    52.0000   100.0000    48.0000 
    70. 

  70.   6 3007      5114     5172.1  wm-lh-fusiform                    86.7215    11.9484    52.0000   121.0000    69.0000 
    71. 

  71.   7 3008      8838     8997.6  wm-lh-inferiorparietal           100.4851    10.8063    58.0000   128.0000    70.0000 
    72. 

  72.   8 3009      5020     4997.3  wm-lh-inferiortemporal            87.2265    12.7043    49.0000   120.0000    71.0000 
    73. 

  73.   9 3010      3691     3698.2  wm-lh-isthmuscingulate           102.0119    12.4469    31.0000   132.0000   101.0000 
    74. 

  74.  10 3011      7173     7353.2  wm-lh-lateraloccipital            93.7613    11.1614    63.0000   125.0000    62.0000 
    75. 

  75.  11 3012      6282     6286.2  wm-lh-lateralorbitofrontal        96.0871    12.1622    60.0000   124.0000    64.0000 
    76. 

  76.  12 3013      4409     4420.1  wm-lh-lingual                     90.8986    11.9204    34.0000   120.0000    86.0000 
    77. 

  77.  13 3014      3329     3339.8  wm-lh-medialorbitofrontal         92.9970    14.8815    31.0000   124.0000    93.0000 
    78. 

  78.  14 3015      3558     3728.6  wm-lh-middletemporal              88.9696    10.8580    58.0000   122.0000    64.0000 
    79. 

  79.  15 3016      1257     1350.5  wm-lh-parahippocampal             80.9737     9.2567    56.0000   106.0000    50.0000 
    80. 

  80.  16 3017      3824     3876.3  wm-lh-paracentral                 96.0719     9.7475    62.0000   121.0000    59.0000 
    81. 

  81.  17 3018      3413     3428.0  wm-lh-parsopercularis            100.9373    11.1145    59.0000   126.0000    67.0000 
    82. 

  82.  18 3019       919      936.8  wm-lh-parsorbitalis               93.6355    11.0804    63.0000   119.0000    56.0000 
    83. 

  83.  19 3020      2731     2777.4  wm-lh-parstriangularis           102.9897     9.4589    72.0000   127.0000    55.0000 
    84. 

  84.  20 3021      2917     2796.1  wm-lh-pericalcarine               96.5879    11.4083    65.0000   121.0000    56.0000 
    85. 

  85.  21 3022      5344     5544.9  wm-lh-postcentral                 93.2970    11.2028    61.0000   123.0000    62.0000 
    86. 

  86.  22 3023      4545     4508.4  wm-lh-posteriorcingulate         102.2480    11.5912    34.0000   129.0000    95.0000 
    87. 

  87.  23 3024     11260    11350.6  wm-lh-precentral                  96.0853    10.6361    60.0000   129.0000    69.0000 
    88. 

  88.  24 3025      8826     8882.1  wm-lh-precuneus                  101.1073    10.2244    38.0000   126.0000    88.0000 
    89. 

  89.  25 3026      2358     2272.4  wm-lh-rostralanteriorcingulate   101.3478    17.6367    15.0000   138.0000   123.0000 
    90. 

  90.  26 3027     10660    10930.1  wm-lh-rostralmiddlefrontal        98.9461    10.8890    59.0000   129.0000    70.0000 
    91. 

  91.  27 3028     15892    16063.3  wm-lh-superiorfrontal             93.9077    11.4210    58.0000   123.0000    65.0000 
    92. 

  92.  28 3029      9788     9945.2  wm-lh-superiorparietal            97.3726    11.4384    62.0000   125.0000    63.0000 
    93. 

  93.  29 3030      5662     5869.4  wm-lh-superiortemporal            92.8891    11.3495    60.0000   125.0000    65.0000 
    94. 

  94.  30 3031      7062     7209.4  wm-lh-supramarginal               97.2628    11.4873    62.0000   124.0000    62.0000 
    95. 

  95.  31 3032       208      211.8  wm-lh-frontalpole                 89.0000    10.7730    68.0000   119.0000    51.0000 
    96. 

  96.  32 3033       504      545.7  wm-lh-temporalpole                77.2083     8.9721    52.0000   101.0000    49.0000 
    97. 

  97.  33 3034       539      535.2  wm-lh-transversetemporal          94.7885     8.4459    72.0000   117.0000    45.0000 
    98. 

  98.  34 3035      8662     8641.3  wm-lh-insula                      93.1654    13.0997    16.0000   124.0000   108.0000 
    99. 

  99.  35 4001      1969     1973.3  wm-rh-bankssts                   101.9441     8.1820    75.0000   131.0000    56.0000 
    100. 

  100.  36 4002      2681     2637.8  wm-rh-caudalanteriorcingulate    107.3890    12.2771    44.0000   137.0000    93.0000 
    101. 

  101.  37 4003      5883     5873.7  wm-rh-caudalmiddlefrontal         96.0133    10.8025    61.0000   119.0000    58.0000 
    102. 

  102.  38 4005      1813     1910.3  wm-rh-cuneus                      91.8224     9.9460    67.0000   116.0000    49.0000 
    103. 

  103.  39 4006       740      771.8  wm-rh-entorhinal                  70.5676     7.6376    53.0000    97.0000    44.0000 
    104. 

  104.  40 4007      5156     5218.4  wm-rh-fusiform                    86.8078    11.9821    48.0000   115.0000    67.0000 
    105. 

  105.  41 4008      9537     9711.5  wm-rh-inferiorparietal            98.2029    10.4537    63.0000   129.0000    66.0000 
    106. 

  106.  42 4009      4913     4998.0  wm-rh-inferiortemporal            87.9790    12.3277    52.0000   119.0000    67.0000 
    107. 

  107.  43 4010      3261     3285.0  wm-rh-isthmuscingulate           102.2318    11.2230    24.0000   128.0000   104.0000 
    108. 

  108.  44 4011      8884     9065.3  wm-rh-lateraloccipital            91.6750    11.1439    58.0000   126.0000    68.0000 
    109. 

  109.  45 4012      6290     6254.4  wm-rh-lateralorbitofrontal        94.0992    13.0112    52.0000   121.0000    69.0000 
    110. 

  110.  46 4013      5107     5174.7  wm-rh-lingual                     87.4844    11.6833    29.0000   118.0000    89.0000 
    111. 

  111.  47 4014      3062     3051.6  wm-rh-medialorbitofrontal         94.2678    13.2037    25.0000   129.0000   104.0000 
    112. 

  112.  48 4015      4516     4713.6  wm-rh-middletemporal              92.7801    12.0358    55.0000   126.0000    71.0000 
    113. 

  113.  49 4016      1122     1158.2  wm-rh-parahippocampal             83.5312     9.4852    52.0000   118.0000    66.0000 
    114. 

  114.  50 4017      4862     4924.5  wm-rh-paracentral                 95.7277     9.0295    66.0000   117.0000    51.0000 
    115. 

  115.  51 4018      2870     2871.8  wm-rh-parsopercularis             94.2826    11.1486    53.0000   124.0000    71.0000 
    116. 

  116.  52 4019       979     1005.7  wm-rh-parsorbitalis               90.8846    11.5098    63.0000   123.0000    60.0000 
    117. 

  117.  53 4020      2652     2665.6  wm-rh-parstriangularis            93.9529    11.3499    55.0000   121.0000    66.0000 
    118. 

  118.  54 4021      2951     2803.8  wm-rh-pericalcarine               88.3839    11.0360    31.0000   117.0000    86.0000 
    119. 

  119.  55 4022      5429     5592.5  wm-rh-postcentral                 93.7895    11.3401    60.0000   122.0000    62.0000 
    120. 

  120.  56 4023      4337     4306.0  wm-rh-posteriorcingulate         103.0957    10.8398    32.0000   129.0000    97.0000 
    121. 

  121.  57 4024     10943    11037.5  wm-rh-precentral                  94.3952    10.1600    59.0000   126.0000    67.0000 
    122. 

  122.  58 4025      8890     8883.5  wm-rh-precuneus                   97.8066     9.8110    39.0000   125.0000    86.0000 
    123. 

  123.  59 4026      2228     2214.0  wm-rh-rostralanteriorcingulate   107.7105    11.9234    60.0000   137.0000    77.0000 
    124. 

  124.  60 4027      9856    10321.6  wm-rh-rostralmiddlefrontal        98.3752    10.5832    59.0000   131.0000    72.0000 
    125. 

  125.  61 4028     16454    16864.8  wm-rh-superiorfrontal             95.4733    11.0156    59.0000   127.0000    68.0000 
    126. 

  126.  62 4029      9124     9383.3  wm-rh-superiorparietal            93.9079    10.9372    61.0000   120.0000    59.0000 
    127. 

  127.  63 4030      5024     5209.2  wm-rh-superiortemporal            92.8037    12.5755    57.0000   124.0000    67.0000 
    128. 

  128.  64 4031      7528     7657.1  wm-rh-supramarginal               99.0749    11.2997    15.0000   128.0000   113.0000 
    129. 

  129.  65 4032       247      251.7  wm-rh-frontalpole                 95.3036    10.8677    66.0000   117.0000    51.0000 
    130. 

  130.  66 4033       466      483.6  wm-rh-temporalpole                70.8498     8.1544    52.0000    94.0000    42.0000 
    131. 

  131.  67 4034       473      473.9  wm-rh-transversetemporal          98.3488     8.0245    77.0000   119.0000    42.0000 
    132. 

  132.  68 4035      8671     8662.8  wm-rh-insula                      91.2722    12.8376    27.0000   124.0000    97.0000 
    133. 

  133.  69 5001     19424    19078.0  Left-UnsegmentedWhiteMatter       97.9823    13.8071     8.0000   133.0000   125.0000 
    134. 

  134.  70 5002     18965    18658.4  Right-UnsegmentedWhiteMatter      97.9046    12.0110     9.0000   130.0000   121.0000 
    135.