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stats
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lh.BA_exvivo.thresh.stats

lh.BA_exvivo.thresh.stats 4.3 KB
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  1. # Table of FreeSurfer cortical parcellation anatomical statistics 
    2. 

  2. # 
    3. 

  3. # CreationTime 2017/10/08-05:18:18-GMT
    4. 

  4. # generating_program mris_anatomical_stats
    5. 

  5. # cvs_version $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $
    6. 

  6. # mrisurf.c-cvs_version $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $
    7. 

  7. # cmdline mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.thresh.stats -b -a ./lh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab 0051280 lh white 
    8. 

  8. # sysname  Linux
    9. 

  9. # hostname tars-538
    10. 

  10. # machine  x86_64
    11. 

  11. # user     ntraut
    12. 

  12. # 
    13. 

  13. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    14. 

  14. # anatomy_type surface
    15. 

  15. # subjectname 0051280
    16. 

  16. # hemi lh
    17. 

  17. # AnnotationFile ./lh.BA_exvivo.thresh.annot
    18. 

  18. # AnnotationFileTimeStamp 2017/10/08 07:17:48
    19. 

  19. # Measure Cortex, NumVert, Number of Vertices, 144655, unitless
    20. 

  20. # Measure Cortex, WhiteSurfArea, White Surface Total Area, 100161, mm^2
    21. 

  21. # Measure BrainSeg, BrainSegVol, Brain Segmentation Volume, 1190806.000000, mm^3
    22. 

  22. # Measure BrainSegNotVent, BrainSegVolNotVent, Brain Segmentation Volume Without Ventricles, 1168020.000000, mm^3
    23. 

  23. # Measure BrainSegNotVentSurf, BrainSegVolNotVentSurf, Brain Segmentation Volume Without Ventricles from Surf, 1168535.360362, mm^3
    24. 

  24. # Measure Cortex, CortexVol Total cortical gray matter volume, 599330.606675, mm^3
    25. 

  25. # Measure SupraTentorial, SupraTentorialVol, Supratentorial volume, 1058367.360362, mm^3
    26. 

  26. # Measure SupraTentorialNotVent, SupraTentorialVolNotVent, Supratentorial volume, 1039363.360362, mm^3
    27. 

  27. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1449500.492759, mm^3
    28. 

  28. # NTableCols 10
    29. 

  29. # TableCol  1 ColHeader StructName
    30. 

  30. # TableCol  1 FieldName Structure Name
    31. 

  31. # TableCol  1 Units     NA
    32. 

  32. # TableCol  2 ColHeader NumVert
    33. 

  33. # TableCol  2 FieldName Number of Vertices
    34. 

  34. # TableCol  2 Units     unitless
    35. 

  35. # TableCol  3 ColHeader SurfArea
    36. 

  36. # TableCol  3 FieldName Surface Area
    37. 

  37. # TableCol  3 Units     mm^2
    38. 

  38. # TableCol  4 ColHeader GrayVol
    39. 

  39. # TableCol  4 FieldName Gray Matter Volume
    40. 

  40. # TableCol  4 Units     mm^3
    41. 

  41. # TableCol  5 ColHeader ThickAvg 
    42. 

  42. # TableCol  5 FieldName Average Thickness
    43. 

  43. # TableCol  5 Units     mm
    44. 

  44. # TableCol  6 ColHeader ThickStd
    45. 

  45. # TableCol  6 FieldName Thickness StdDev
    46. 

  46. # TableCol  6 Units     mm 
    47. 

  47. # TableCol  7 ColHeader MeanCurv
    48. 

  48. # TableCol  7 FieldName Integrated Rectified Mean Curvature
    49. 

  49. # TableCol  7 Units     mm^-1
    50. 

  50. # TableCol  8 ColHeader GausCurv 
    51. 

  51. # TableCol  8 FieldName Integrated Rectified Gaussian Curvature
    52. 

  52. # TableCol  8 Units     mm^-2
    53. 

  53. # TableCol  9 ColHeader  FoldInd
    54. 

  54. # TableCol  9 FieldName  Folding Index 
    55. 

  55. # TableCol  9 Units      unitless 
    56. 

  56. # TableCol 10 ColHeader CurvInd
    57. 

  57. # TableCol 10 FieldName Intrinsic Curvature Index
    58. 

  58. # TableCol 10 Units     unitless
    59. 

  59. # ColHeaders StructName NumVert SurfArea GrayVol ThickAvg ThickStd MeanCurv GausCurv FoldInd CurvInd
    60. 

  60. BA1_exvivo                                765    479   1341  2.133 0.475     0.159     0.041       18     1.5
    61. 

  61. BA2_exvivo                               1450   1010   2705  2.387 0.442     0.094     0.014       11     0.9
    62. 

  62. BA3a_exvivo                               923    617    966  2.087 0.361     0.128     0.026        7     1.0
    63. 

  63. BA3b_exvivo                              1531   1060   1900  1.648 0.330     0.096     0.022       12     1.5
    64. 

  64. BA4a_exvivo                              1680   1122   3676  2.721 0.456     0.094     0.018       11     1.2
    65. 

  65. BA4p_exvivo                              1018    710   1808  2.585 0.379     0.098     0.017        6     0.7
    66. 

  66. BA6_exvivo                               5879   4217  14054  2.775 0.503     0.125     0.027       78     6.5
    67. 

  67. BA44_exvivo                              1631   1162   4197  2.865 0.538     0.127     0.030       33     1.9
    68. 

  68. BA45_exvivo                              1224    887   3651  2.909 0.613     0.147     0.046       26     2.3
    69. 

  69. V1_exvivo                                3711   2754   5465  1.951 0.518     0.163     0.041       63     6.7
    70. 

  70. V2_exvivo                                4272   3006   6971  2.204 0.581     0.164     0.042       76     7.0
    71. 

  71. MT_exvivo                                 548    377    803  2.313 0.400     0.137     0.026        5     0.7
    72. 

  72. perirhinal_exvivo                         431    321   1654  3.714 0.538     0.125     0.036        7     0.7
    73. 

  73. entorhinal_exvivo                         414    318   1793  3.495 0.543     0.144     0.040        7     0.6
    74.