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reference-preprocessing
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ABIDE_fs-6.0.0
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ABIDE_fs-6.0.0
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0051214
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051214 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-941
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051214
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 10599.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 201884.327258, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 197266.627605, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 399150.954864, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1600440.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1433055.414523, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 04:27:35 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 21:06:39 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 21:06:39 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3520     3484.7  wm-lh-bankssts                   100.7739     8.2687    69.0000   125.0000    56.0000 
    66. 

  66.   2 3002      2895     2789.2  wm-lh-caudalanteriorcingulate    101.2729    12.8596    34.0000   133.0000    99.0000 
    67. 

  67.   3 3003      5094     5069.8  wm-lh-caudalmiddlefrontal         98.5921    11.5613    60.0000   130.0000    70.0000 
    68. 

  68.   4 3005      2396     2404.2  wm-lh-cuneus                      96.0814    10.7781    65.0000   119.0000    54.0000 
    69. 

  69.   5 3006       891      947.4  wm-lh-entorhinal                  72.6622     8.7964    33.0000   103.0000    70.0000 
    70. 

  70.   6 3007      7323     7340.2  wm-lh-fusiform                    90.1991    12.7652    24.0000   121.0000    97.0000 
    71. 

  71.   7 3008      8440     8519.3  wm-lh-inferiorparietal            98.9936    10.2529    66.0000   124.0000    58.0000 
    72. 

  72.   8 3009      6213     6280.7  wm-lh-inferiortemporal            88.6955    13.7996    52.0000   124.0000    72.0000 
    73. 

  73.   9 3010      4002     4028.7  wm-lh-isthmuscingulate           102.2829    12.1067    26.0000   134.0000   108.0000 
    74. 

  74.  10 3011      9012     9346.4  wm-lh-lateraloccipital           100.0176    10.0779    67.0000   126.0000    59.0000 
    75. 

  75.  11 3012      5828     5803.9  wm-lh-lateralorbitofrontal        94.2069    12.2504    60.0000   131.0000    71.0000 
    76. 

  76.  12 3013      4934     4936.7  wm-lh-lingual                     94.3239    12.0194    30.0000   125.0000    95.0000 
    77. 

  77.  13 3014      3091     3048.5  wm-lh-medialorbitofrontal         89.8311    11.9669    27.0000   119.0000    92.0000 
    78. 

  78.  14 3015      5072     5186.1  wm-lh-middletemporal              89.2181    11.3536    54.0000   123.0000    69.0000 
    79. 

  79.  15 3016      1725     1839.3  wm-lh-parahippocampal             84.7670     9.5337    55.0000   116.0000    61.0000 
    80. 

  80.  16 3017      4024     4015.0  wm-lh-paracentral                 97.4699     9.2880    67.0000   121.0000    54.0000 
    81. 

  81.  17 3018      2566     2557.0  wm-lh-parsopercularis            103.7701    10.8966    67.0000   136.0000    69.0000 
    82. 

  82.  18 3019      1196     1189.2  wm-lh-parsorbitalis               90.6505    11.4372    58.0000   122.0000    64.0000 
    83. 

  83.  19 3020      2771     2829.4  wm-lh-parstriangularis            99.9365    10.1042    70.0000   122.0000    52.0000 
    84. 

  84.  20 3021      3102     2963.3  wm-lh-pericalcarine               97.6351    12.3867     5.0000   125.0000   120.0000 
    85. 

  85.  21 3022      7081     7313.6  wm-lh-postcentral                 98.4946    11.3077    64.0000   135.0000    71.0000 
    86. 

  86.  22 3023      4337     4229.7  wm-lh-posteriorcingulate          99.0055    10.5257    46.0000   128.0000    82.0000 
    87. 

  87.  23 3024     12959    13162.6  wm-lh-precentral                 100.5939    11.0077    67.0000   130.0000    63.0000 
    88. 

  88.  24 3025      7010     6996.2  wm-lh-precuneus                   99.4548    10.9176    39.0000   123.0000    84.0000 
    89. 

  89.  25 3026      2411     2353.7  wm-lh-rostralanteriorcingulate   101.3443    13.4831    63.0000   133.0000    70.0000 
    90. 

  90.  26 3027     11088    11205.1  wm-lh-rostralmiddlefrontal        95.9556    11.7597    58.0000   123.0000    65.0000 
    91. 

  91.  27 3028     15582    15667.5  wm-lh-superiorfrontal             91.5191    11.2733    57.0000   123.0000    66.0000 
    92. 

  92.  28 3029      9180     9327.6  wm-lh-superiorparietal            99.7569    10.3593    66.0000   125.0000    59.0000 
    93. 

  93.  29 3030      7261     7522.3  wm-lh-superiortemporal            94.8748    11.4409    58.0000   122.0000    64.0000 
    94. 

  94.  30 3031      7784     7845.7  wm-lh-supramarginal              102.5062    11.1472    69.0000   132.0000    63.0000 
    95. 

  95.  31 3032       162      187.7  wm-lh-frontalpole                 81.2963     8.6232    60.0000   104.0000    44.0000 
    96. 

  96.  32 3033       534      594.0  wm-lh-temporalpole                70.4719     7.9686    49.0000    98.0000    49.0000 
    97. 

  97.  33 3034       743      744.7  wm-lh-transversetemporal          95.9502     8.3609    74.0000   121.0000    47.0000 
    98. 

  98.  34 3035      9361     9266.6  wm-lh-insula                      94.9874    12.9601    24.0000   130.0000   106.0000 
    99. 

  99.  35 4001      3037     3013.1  wm-rh-bankssts                   104.4919     7.5332    76.0000   128.0000    52.0000 
    100. 

  100.  36 4002      2703     2652.9  wm-rh-caudalanteriorcingulate    102.2952    12.1517    47.0000   134.0000    87.0000 
    101. 

  101.  37 4003      4040     4038.7  wm-rh-caudalmiddlefrontal         96.8092     9.4112    67.0000   119.0000    52.0000 
    102. 

  102.  38 4005      2158     2199.8  wm-rh-cuneus                      90.3397     9.5131    64.0000   115.0000    51.0000 
    103. 

  103.  39 4006       661      678.4  wm-rh-entorhinal                  70.0272     8.1748    37.0000    95.0000    58.0000 
    104. 

  104.  40 4007      6490     6504.2  wm-rh-fusiform                    90.6482    12.7056    46.0000   122.0000    76.0000 
    105. 

  105.  41 4008      7900     8004.3  wm-rh-inferiorparietal           100.7611    10.5790    65.0000   137.0000    72.0000 
    106. 

  106.  42 4009      6102     6187.0  wm-rh-inferiortemporal            91.9249    13.8120    51.0000   128.0000    77.0000 
    107. 

  107.  43 4010      2358     2381.9  wm-rh-isthmuscingulate           100.0119    10.5887    21.0000   123.0000   102.0000 
    108. 

  108.  44 4011      9509     9751.7  wm-rh-lateraloccipital            94.1475    10.3232    51.0000   126.0000    75.0000 
    109. 

  109.  45 4012      6345     6340.2  wm-rh-lateralorbitofrontal        91.2230    11.9053    47.0000   122.0000    75.0000 
    110. 

  110.  46 4013      5907     5960.8  wm-rh-lingual                     90.1034    10.9794    34.0000   121.0000    87.0000 
    111. 

  111.  47 4014      2940     3017.7  wm-rh-medialorbitofrontal         91.3840    11.3919    58.0000   121.0000    63.0000 
    112. 

  112.  48 4015      5833     6074.9  wm-rh-middletemporal              93.9525    14.1218    53.0000   132.0000    79.0000 
    113. 

  113.  49 4016      1593     1636.7  wm-rh-parahippocampal             85.3955     9.5439    54.0000   117.0000    63.0000 
    114. 

  114.  50 4017      3285     3301.5  wm-rh-paracentral                 95.7108     9.8100    66.0000   120.0000    54.0000 
    115. 

  115.  51 4018      2278     2250.4  wm-rh-parsopercularis             91.0777    10.5997    61.0000   114.0000    53.0000 
    116. 

  116.  52 4019      1433     1500.2  wm-rh-parsorbitalis               87.3726    11.0832    59.0000   118.0000    59.0000 
    117. 

  117.  53 4020      4429     4509.5  wm-rh-parstriangularis            92.8203    11.1887    62.0000   120.0000    58.0000 
    118. 

  118.  54 4021      3127     2924.5  wm-rh-pericalcarine               86.9437    14.1970     0.0000   114.0000   114.0000 
    119. 

  119.  55 4022      5322     5402.7  wm-rh-postcentral                 99.2377    10.8617    66.0000   129.0000    63.0000 
    120. 

  120.  56 4023      3074     3070.5  wm-rh-posteriorcingulate         100.1623     9.9268    45.0000   128.0000    83.0000 
    121. 

  121.  57 4024      8889     9019.1  wm-rh-precentral                  95.3014    10.3886    61.0000   124.0000    63.0000 
    122. 

  122.  58 4025      6565     6540.1  wm-rh-precuneus                   98.2291     9.9937    56.0000   125.0000    69.0000 
    123. 

  123.  59 4026      2179     2164.5  wm-rh-rostralanteriorcingulate   103.9426    11.9002    70.0000   133.0000    63.0000 
    124. 

  124.  60 4027     16771    17416.7  wm-rh-rostralmiddlefrontal        97.1316     9.9870    58.0000   127.0000    69.0000 
    125. 

  125.  61 4028     21743    22156.8  wm-rh-superiorfrontal             93.9983    10.2890    59.0000   123.0000    64.0000 
    126. 

  126.  62 4029      6546     6621.9  wm-rh-superiorparietal            97.6749    10.8149    64.0000   125.0000    61.0000 
    127. 

  127.  63 4030      5166     5374.3  wm-rh-superiortemporal            90.4133    13.7697    52.0000   130.0000    78.0000 
    128. 

  128.  64 4031      4711     4739.3  wm-rh-supramarginal              103.3373    10.6978    74.0000   132.0000    58.0000 
    129. 

  129.  65 4032       287      315.4  wm-rh-frontalpole                 89.0314     7.5718    69.0000   110.0000    41.0000 
    130. 

  130.  66 4033       554      558.3  wm-rh-temporalpole                67.0126     7.7046    47.0000    91.0000    44.0000 
    131. 

  131.  67 4034       735      722.5  wm-rh-transversetemporal          99.6272     8.2695    75.0000   120.0000    45.0000 
    132. 

  132.  68 4035     10930    10812.6  wm-rh-insula                      88.7345    14.1470    28.0000   120.0000    92.0000 
    133. 

  133.  69 5001     20332    20160.6  Left-UnsegmentedWhiteMatter      100.7263    11.9316    14.0000   133.0000   119.0000 
    134. 

  134.  70 5002     20981    20740.6  Right-UnsegmentedWhiteMatter      98.6942    11.7789    16.0000   130.0000   114.0000 
    135.