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reference-preprocessing
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ABIDE_fs-6.0.0
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ABIDE_fs-6.0.0
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0051147
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051147 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-617
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0051147
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 33886.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 231977.530591, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 229005.029312, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 460982.559904, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1734580.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1698482.235871, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 02:12:10 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 18:20:24 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 18:20:24 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3112     3045.7  wm-lh-bankssts                    98.3901     7.5623    70.0000   119.0000    49.0000 
    66. 

  66.   2 3002      3908     3845.3  wm-lh-caudalanteriorcingulate    103.1799     9.0138    36.0000   125.0000    89.0000 
    67. 

  67.   3 3003      8554     8684.0  wm-lh-caudalmiddlefrontal        101.6558     8.0945    74.0000   123.0000    49.0000 
    68. 

  68.   4 3005      2331     2321.0  wm-lh-cuneus                      95.9279    10.1227    67.0000   125.0000    58.0000 
    69. 

  69.   5 3006       606      651.4  wm-lh-entorhinal                  80.5693     7.9928    61.0000    98.0000    37.0000 
    70. 

  70.   6 3007      7305     7226.4  wm-lh-fusiform                    90.0137    10.4529    49.0000   115.0000    66.0000 
    71. 

  71.   7 3008     10876    11070.6  wm-lh-inferiorparietal           101.4772     8.8696    49.0000   127.0000    78.0000 
    72. 

  72.   8 3009      7041     7060.9  wm-lh-inferiortemporal            89.9763    10.4760    60.0000   115.0000    55.0000 
    73. 

  73.   9 3010      4419     4475.5  wm-lh-isthmuscingulate            98.3639    12.0232     1.0000   121.0000   120.0000 
    74. 

  74.  10 3011      9368     9612.1  wm-lh-lateraloccipital            95.3971    10.0675    64.0000   130.0000    66.0000 
    75. 

  75.  11 3012      6414     6381.9  wm-lh-lateralorbitofrontal        95.9546    10.6576    62.0000   120.0000    58.0000 
    76. 

  76.  12 3013      4200     4285.8  wm-lh-lingual                     88.0017    10.2765    40.0000   113.0000    73.0000 
    77. 

  77.  13 3014      4608     4563.6  wm-lh-medialorbitofrontal         95.8012    11.6848    31.0000   119.0000    88.0000 
    78. 

  78.  14 3015      5162     5374.5  wm-lh-middletemporal              93.0170    10.1297    64.0000   122.0000    58.0000 
    79. 

  79.  15 3016      1465     1534.6  wm-lh-parahippocampal             88.6553    11.1715    56.0000   115.0000    59.0000 
    80. 

  80.  16 3017      3373     3407.4  wm-lh-paracentral                100.1826     7.7054    74.0000   116.0000    42.0000 
    81. 

  81.  17 3018      2629     2606.1  wm-lh-parsopercularis             98.0198     9.5057    67.0000   118.0000    51.0000 
    82. 

  82.  18 3019      1090     1073.4  wm-lh-parsorbitalis               96.0073    10.2856    63.0000   117.0000    54.0000 
    83. 

  83.  19 3020      2477     2493.6  wm-lh-parstriangularis            98.9124     9.1778    71.0000   119.0000    48.0000 
    84. 

  84.  20 3021      2360     2275.0  wm-lh-pericalcarine               90.2059    12.1292     6.0000   117.0000   111.0000 
    85. 

  85.  21 3022      8283     8565.2  wm-lh-postcentral                 96.5615     9.1820    69.0000   121.0000    52.0000 
    86. 

  86.  22 3023      5041     4978.1  wm-lh-posteriorcingulate         101.3583    10.0917    35.0000   127.0000    92.0000 
    87. 

  87.  23 3024     15605    15735.4  wm-lh-precentral                  99.9774     8.3526    67.0000   124.0000    57.0000 
    88. 

  88.  24 3025      8530     8526.4  wm-lh-precuneus                   99.0723    10.5733    24.0000   124.0000   100.0000 
    89. 

  89.  25 3026      2665     2577.7  wm-lh-rostralanteriorcingulate    95.6221    13.5276    39.0000   125.0000    86.0000 
    90. 

  90.  26 3027     13077    13164.4  wm-lh-rostralmiddlefrontal        97.7738    10.1073    65.0000   124.0000    59.0000 
    91. 

  91.  27 3028     17339    17500.4  wm-lh-superiorfrontal             99.2276     9.4182    65.0000   122.0000    57.0000 
    92. 

  92.  28 3029     12354    12533.5  wm-lh-superiorparietal           100.6748     8.9996    68.0000   126.0000    58.0000 
    93. 

  93.  29 3030      6550     6816.1  wm-lh-superiortemporal            93.2350     9.8557    61.0000   116.0000    55.0000 
    94. 

  94.  30 3031      7830     7846.4  wm-lh-supramarginal              100.7835     9.7006    71.0000   123.0000    52.0000 
    95. 

  95.  31 3032       291      294.6  wm-lh-frontalpole                 95.0997     9.9821    69.0000   116.0000    47.0000 
    96. 

  96.  32 3033       583      605.1  wm-lh-temporalpole                78.2779     7.3346    60.0000   100.0000    40.0000 
    97. 

  97.  33 3034       876      875.0  wm-lh-transversetemporal          93.5194     7.3859    75.0000   110.0000    35.0000 
    98. 

  98.  34 3035      9785     9720.4  wm-lh-insula                      91.4341    11.4566    45.0000   117.0000    72.0000 
    99. 

  99.  35 4001      2708     2673.7  wm-rh-bankssts                    98.7648     7.2173    74.0000   121.0000    47.0000 
    100. 

  100.  36 4002      3073     2982.8  wm-rh-caudalanteriorcingulate    101.1871    10.8034    40.0000   123.0000    83.0000 
    101. 

  101.  37 4003      7713     7745.5  wm-rh-caudalmiddlefrontal         98.7152     8.2561    72.0000   121.0000    49.0000 
    102. 

  102.  38 4005      2597     2672.7  wm-rh-cuneus                      94.5626     9.6951    68.0000   126.0000    58.0000 
    103. 

  103.  39 4006       544      577.9  wm-rh-entorhinal                  79.8603     7.7121    62.0000    99.0000    37.0000 
    104. 

  104.  40 4007      6715     6614.2  wm-rh-fusiform                    89.0614    10.7753    45.0000   114.0000    69.0000 
    105. 

  105.  41 4008     10705    10921.6  wm-rh-inferiorparietal           100.5387     9.0718    73.0000   125.0000    52.0000 
    106. 

  106.  42 4009      6484     6547.4  wm-rh-inferiortemporal            91.1892    10.1239    62.0000   121.0000    59.0000 
    107. 

  107.  43 4010      4042     4123.9  wm-rh-isthmuscingulate            99.0589    10.0918     0.0000   119.0000   119.0000 
    108. 

  108.  44 4011      9794     9949.7  wm-rh-lateraloccipital            95.5612     9.7646    66.0000   122.0000    56.0000 
    109. 

  109.  45 4012      7266     7142.1  wm-rh-lateralorbitofrontal        94.1830    11.4865    42.0000   119.0000    77.0000 
    110. 

  110.  46 4013      4817     4920.4  wm-rh-lingual                     87.0945    10.4462    28.0000   114.0000    86.0000 
    111. 

  111.  47 4014      4370     4340.2  wm-rh-medialorbitofrontal         97.0918    12.8552    26.0000   126.0000   100.0000 
    112. 

  112.  48 4015      5583     5768.5  wm-rh-middletemporal              94.1782    10.1763    66.0000   119.0000    53.0000 
    113. 

  113.  49 4016      1582     1662.4  wm-rh-parahippocampal             87.7528    11.0389    26.0000   124.0000    98.0000 
    114. 

  114.  50 4017      4038     4052.2  wm-rh-paracentral                 98.3336     7.6204    69.0000   117.0000    48.0000 
    115. 

  115.  51 4018      2829     2821.2  wm-rh-parsopercularis             96.8455     8.8522    67.0000   115.0000    48.0000 
    116. 

  116.  52 4019      1202     1236.1  wm-rh-parsorbitalis               95.0591     9.6894    69.0000   115.0000    46.0000 
    117. 

  117.  53 4020      3019     3033.2  wm-rh-parstriangularis            96.1514     8.7969    71.0000   115.0000    44.0000 
    118. 

  118.  54 4021      2518     2457.0  wm-rh-pericalcarine               90.2558    10.1953    20.0000   121.0000   101.0000 
    119. 

  119.  55 4022      6955     7141.1  wm-rh-postcentral                 93.7888     9.5676    67.0000   123.0000    56.0000 
    120. 

  120.  56 4023      4476     4461.8  wm-rh-posteriorcingulate         100.6901     9.6329    16.0000   121.0000   105.0000 
    121. 

  121.  57 4024     15828    15929.8  wm-rh-precentral                  96.9351     8.2003    67.0000   117.0000    50.0000 
    122. 

  122.  58 4025      8347     8369.2  wm-rh-precuneus                   97.6040     9.0835    58.0000   119.0000    61.0000 
    123. 

  123.  59 4026      2265     2179.3  wm-rh-rostralanteriorcingulate    99.4278    11.9935    34.0000   124.0000    90.0000 
    124. 

  124.  60 4027     13600    13711.4  wm-rh-rostralmiddlefrontal        97.3596     9.7787    67.0000   122.0000    55.0000 
    125. 

  125.  61 4028     17150    17338.3  wm-rh-superiorfrontal             99.7584     8.8262    60.0000   127.0000    67.0000 
    126. 

  126.  62 4029     12885    13047.4  wm-rh-superiorparietal            97.6022     9.2778    67.0000   121.0000    54.0000 
    127. 

  127.  63 4030      5724     5970.8  wm-rh-superiortemporal            92.9862     9.5934    62.0000   116.0000    54.0000 
    128. 

  128.  64 4031      7380     7421.4  wm-rh-supramarginal               99.6408     9.6467    68.0000   124.0000    56.0000 
    129. 

  129.  65 4032       546      534.4  wm-rh-frontalpole                 96.9634    10.7397    72.0000   122.0000    50.0000 
    130. 

  130.  66 4033       488      488.2  wm-rh-temporalpole                79.9713     8.4893    61.0000   104.0000    43.0000 
    131. 

  131.  67 4034       719      680.1  wm-rh-transversetemporal          93.7135     8.4231    71.0000   109.0000    38.0000 
    132. 

  132.  68 4035      9924     9860.8  wm-rh-insula                      90.7609    10.7213    45.0000   115.0000    70.0000 
    133. 

  133.  69 5001     29820    29709.6  Left-UnsegmentedWhiteMatter       99.5051    11.1311    10.0000   124.0000   114.0000 
    134. 

  134.  70 5002     29611    29505.3  Right-UnsegmentedWhiteMatter      98.4144    12.0527     1.0000   123.0000   122.0000 
    135.