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ABIDE_fs-6.0.0
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0050960
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050960 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-567
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050960
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 6541.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 263581.701761, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 265865.328096, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 529447.029856, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1598985.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1284501.147267, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:02:13 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:42:03 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:42:03 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3272     3282.0  wm-lh-bankssts                    99.8979     7.5446    72.0000   117.0000    45.0000 
    66. 

  66.   2 3002      2834     2826.8  wm-lh-caudalanteriorcingulate    101.7431     6.9383    54.0000   120.0000    66.0000 
    67. 

  67.   3 3003      7598     7562.8  wm-lh-caudalmiddlefrontal         96.4559     8.4976    69.0000   116.0000    47.0000 
    68. 

  68.   4 3005      3307     3326.8  wm-lh-cuneus                      98.0974     9.7195    71.0000   126.0000    55.0000 
    69. 

  69.   5 3006       614      642.5  wm-lh-entorhinal                  82.9870     9.2502    34.0000   129.0000    95.0000 
    70. 

  70.   6 3007      6929     6853.1  wm-lh-fusiform                    89.2808    10.6284    53.0000   116.0000    63.0000 
    71. 

  71.   7 3008     11175    11126.7  wm-lh-inferiorparietal            98.2839     9.3240    68.0000   121.0000    53.0000 
    72. 

  72.   8 3009      6952     7008.7  wm-lh-inferiortemporal            86.2815    10.3140    55.0000   121.0000    66.0000 
    73. 

  73.   9 3010      3381     3374.1  wm-lh-isthmuscingulate           103.2076     9.5824    41.0000   121.0000    80.0000 
    74. 

  74.  10 3011     10805    10851.4  wm-lh-lateraloccipital            88.1982    12.2419    51.0000   120.0000    69.0000 
    75. 

  75.  11 3012      7435     7358.2  wm-lh-lateralorbitofrontal        97.1802    10.0373    63.0000   123.0000    60.0000 
    76. 

  76.  12 3013      5974     5859.9  wm-lh-lingual                     89.3535    11.9610    46.0000   121.0000    75.0000 
    77. 

  77.  13 3014      3378     3330.8  wm-lh-medialorbitofrontal         96.0805    10.4547    64.0000   120.0000    56.0000 
    78. 

  78.  14 3015      5836     5936.6  wm-lh-middletemporal              92.0487     9.3128    63.0000   115.0000    52.0000 
    79. 

  79.  15 3016      1677     1713.4  wm-lh-parahippocampal             95.4597    10.2968    64.0000   123.0000    59.0000 
    80. 

  80.  16 3017      4529     4519.0  wm-lh-paracentral                 95.8289     8.0119    67.0000   113.0000    46.0000 
    81. 

  81.  17 3018      3791     3726.5  wm-lh-parsopercularis             98.0768     9.3457    68.0000   116.0000    48.0000 
    82. 

  82.  18 3019      1187     1206.3  wm-lh-parsorbitalis               93.6268    10.2508    68.0000   116.0000    48.0000 
    83. 

  83.  19 3020      3816     3732.5  wm-lh-parstriangularis            98.4023     9.1382    66.0000   115.0000    49.0000 
    84. 

  84.  20 3021      4768     4599.0  wm-lh-pericalcarine               91.2271     9.7831    61.0000   119.0000    58.0000 
    85. 

  85.  21 3022      9388     9431.4  wm-lh-postcentral                 93.4558     8.9778    68.0000   127.0000    59.0000 
    86. 

  86.  22 3023      4844     4735.4  wm-lh-posteriorcingulate         101.1051     9.2740    43.0000   120.0000    77.0000 
    87. 

  87.  23 3024     17463    17280.0  wm-lh-precentral                  95.6625     8.4632    66.0000   116.0000    50.0000 
    88. 

  88.  24 3025     10509    10494.0  wm-lh-precuneus                  100.9765     9.4047    35.0000   124.0000    89.0000 
    89. 

  89.  25 3026      1992     1836.5  wm-lh-rostralanteriorcingulate    96.8072    10.4875    56.0000   119.0000    63.0000 
    90. 

  90.  26 3027     13273    13216.9  wm-lh-rostralmiddlefrontal        97.1076     9.9172    65.0000   122.0000    57.0000 
    91. 

  91.  27 3028     22667    22569.5  wm-lh-superiorfrontal             95.7464     8.5814    67.0000   119.0000    52.0000 
    92. 

  92.  28 3029     13791    13778.9  wm-lh-superiorparietal            97.1848     9.1201    69.0000   126.0000    57.0000 
    93. 

  93.  29 3030      7307     7445.5  wm-lh-superiortemporal            95.6730     9.9704    63.0000   121.0000    58.0000 
    94. 

  94.  30 3031      9068     9066.8  wm-lh-supramarginal               98.3889     9.4247    69.0000   119.0000    50.0000 
    95. 

  95.  31 3032       350      360.5  wm-lh-frontalpole                 92.7971     9.2589    72.0000   112.0000    40.0000 
    96. 

  96.  32 3033       661      673.8  wm-lh-temporalpole                81.6309     8.4801    61.0000   106.0000    45.0000 
    97. 

  97.  33 3034       976      909.6  wm-lh-transversetemporal          98.4262     9.5236    70.0000   118.0000    48.0000 
    98. 

  98.  34 3035     11373    11119.6  wm-lh-insula                      94.8602    11.2380    20.0000   132.0000   112.0000 
    99. 

  99.  35 4001      3146     3056.0  wm-rh-bankssts                    99.9135     8.6542    64.0000   123.0000    59.0000 
    100. 

  100.  36 4002      2727     2721.7  wm-rh-caudalanteriorcingulate    101.7455     7.5701    69.0000   119.0000    50.0000 
    101. 

  101.  37 4003      7237     7139.6  wm-rh-caudalmiddlefrontal         94.2736     8.9979    65.0000   113.0000    48.0000 
    102. 

  102.  38 4005      3138     3143.7  wm-rh-cuneus                      97.2887     9.3899    73.0000   121.0000    48.0000 
    103. 

  103.  39 4006       592      612.4  wm-rh-entorhinal                  82.8530     8.7011    60.0000   106.0000    46.0000 
    104. 

  104.  40 4007      6757     6698.8  wm-rh-fusiform                    88.9964    10.2255    58.0000   118.0000    60.0000 
    105. 

  105.  41 4008     11477    11349.8  wm-rh-inferiorparietal            99.1076    10.4988    64.0000   125.0000    61.0000 
    106. 

  106.  42 4009      5653     5669.3  wm-rh-inferiortemporal            84.9977    10.7064    54.0000   111.0000    57.0000 
    107. 

  107.  43 4010      2959     2922.7  wm-rh-isthmuscingulate           101.3856     9.3886    38.0000   121.0000    83.0000 
    108. 

  108.  44 4011     10353    10325.8  wm-rh-lateraloccipital            88.1343    12.1011    52.0000   137.0000    85.0000 
    109. 

  109.  45 4012      7108     7022.6  wm-rh-lateralorbitofrontal        94.4667    10.5462    48.0000   125.0000    77.0000 
    110. 

  110.  46 4013      6986     6902.0  wm-rh-lingual                     88.6504    12.7058    19.0000   123.0000   104.0000 
    111. 

  111.  47 4014      4081     4086.3  wm-rh-medialorbitofrontal         95.5827    10.7945    59.0000   116.0000    57.0000 
    112. 

  112.  48 4015      6935     7017.9  wm-rh-middletemporal              91.1714     9.9306    62.0000   118.0000    56.0000 
    113. 

  113.  49 4016      1949     1955.5  wm-rh-parahippocampal             92.9759     9.1768    50.0000   121.0000    71.0000 
    114. 

  114.  50 4017      5857     5867.0  wm-rh-paracentral                 95.5665     8.3696    66.0000   117.0000    51.0000 
    115. 

  115.  51 4018      3774     3682.3  wm-rh-parsopercularis             97.4073     9.1211    68.0000   115.0000    47.0000 
    116. 

  116.  52 4019      1691     1664.8  wm-rh-parsorbitalis               93.6960    10.4695    68.0000   115.0000    47.0000 
    117. 

  117.  53 4020      3793     3719.3  wm-rh-parstriangularis            96.1466     9.2299    66.0000   114.0000    48.0000 
    118. 

  118.  54 4021      4940     4789.2  wm-rh-pericalcarine               91.0221     9.7079    52.0000   120.0000    68.0000 
    119. 

  119.  55 4022      8622     8591.1  wm-rh-postcentral                 92.5593     9.2961    65.0000   126.0000    61.0000 
    120. 

  120.  56 4023      4693     4583.0  wm-rh-posteriorcingulate         100.5086     8.6723    48.0000   121.0000    73.0000 
    121. 

  121.  57 4024     16856    16696.6  wm-rh-precentral                  94.5109     8.3065    63.0000   114.0000    51.0000 
    122. 

  122.  58 4025     11495    11361.5  wm-rh-precuneus                  100.0415     9.1879    56.0000   120.0000    64.0000 
    123. 

  123.  59 4026      2042     1973.7  wm-rh-rostralanteriorcingulate    99.7346     9.8451    61.0000   125.0000    64.0000 
    124. 

  124.  60 4027     14269    14156.3  wm-rh-rostralmiddlefrontal        95.8610    10.1093    63.0000   117.0000    54.0000 
    125. 

  125.  61 4028     22846    22781.4  wm-rh-superiorfrontal             94.7918     8.7788    61.0000   118.0000    57.0000 
    126. 

  126.  62 4029     13357    13346.1  wm-rh-superiorparietal            97.2801     9.4481    65.0000   123.0000    58.0000 
    127. 

  127.  63 4030      7608     7646.8  wm-rh-superiortemporal            93.9945    10.7941    57.0000   121.0000    64.0000 
    128. 

  128.  64 4031      9873     9810.4  wm-rh-supramarginal               99.5824     9.7019    70.0000   121.0000    51.0000 
    129. 

  129.  65 4032       388      384.6  wm-rh-frontalpole                 89.8222     9.1282    68.0000   115.0000    47.0000 
    130. 

  130.  66 4033       831      870.3  wm-rh-temporalpole                83.4332     9.0972    60.0000   102.0000    42.0000 
    131. 

  131.  67 4034       835      811.4  wm-rh-transversetemporal          93.4156    14.1195    29.0000   121.0000    92.0000 
    132. 

  132.  68 4035      9727     9508.4  wm-rh-insula                      93.8491    11.3111    35.0000   119.0000    84.0000 
    133. 

  133.  69 5001     39372    39096.6  Left-UnsegmentedWhiteMatter      101.0917    10.0436    10.0000   139.0000   129.0000 
    134. 

  134.  70 5002     39015    38980.6  Right-UnsegmentedWhiteMatter     101.0871     9.4056    10.0000   127.0000   117.0000 
    135.