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ABIDE_fs-6.0.0
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0050826
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050826 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-606
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050826
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 13749.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 169168.457853, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 161051.468229, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 330219.926083, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1688180.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1617671.711796, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:02:06 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:15:44 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:15:44 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2281     2303.8  wm-lh-bankssts                   102.4152    11.0961    58.0000   151.0000    93.0000 
    66. 

  66.   2 3002      2373     2420.3  wm-lh-caudalanteriorcingulate     97.4606    11.5962    34.0000   130.0000    96.0000 
    67. 

  67.   3 3003      5123     5238.9  wm-lh-caudalmiddlefrontal        100.5147    11.6429    67.0000   145.0000    78.0000 
    68. 

  68.   4 3005      1853     1856.4  wm-lh-cuneus                      97.3281    11.7294    68.0000   144.0000    76.0000 
    69. 

  69.   5 3006       440      495.4  wm-lh-entorhinal                  80.2568    12.0473    45.0000   119.0000    74.0000 
    70. 

  70.   6 3007      5054     5291.3  wm-lh-fusiform                    95.0598    11.9819    41.0000   138.0000    97.0000 
    71. 

  71.   7 3008      8428     8670.6  wm-lh-inferiorparietal           104.0087    12.4327    36.0000   152.0000   116.0000 
    72. 

  72.   8 3009      4671     4665.7  wm-lh-inferiortemporal           100.6746    14.3782    47.0000   149.0000   102.0000 
    73. 

  73.   9 3010      3765     3879.7  wm-lh-isthmuscingulate            94.4603    12.3545    15.0000   135.0000   120.0000 
    74. 

  74.  10 3011      6402     6671.2  wm-lh-lateraloccipital           100.1848    12.2039    71.0000   145.0000    74.0000 
    75. 

  75.  11 3012      4499     4612.0  wm-lh-lateralorbitofrontal        95.0547    14.0783    36.0000   143.0000   107.0000 
    76. 

  76.  12 3013      3647     3752.2  wm-lh-lingual                     91.9260    13.3143    26.0000   135.0000   109.0000 
    77. 

  77.  13 3014      2230     2338.1  wm-lh-medialorbitofrontal         99.4161    14.0168    38.0000   147.0000   109.0000 
    78. 

  78.  14 3015      3861     4090.2  wm-lh-middletemporal             102.9422    13.7142    65.0000   149.0000    84.0000 
    79. 

  79.  15 3016       773      955.4  wm-lh-parahippocampal             82.8111    10.2379    55.0000   131.0000    76.0000 
    80. 

  80.  16 3017      3240     3318.8  wm-lh-paracentral                 95.0009     9.7978    62.0000   131.0000    69.0000 
    81. 

  81.  17 3018      2723     2879.5  wm-lh-parsopercularis             96.4455    10.7136    66.0000   139.0000    73.0000 
    82. 

  82.  18 3019       732      737.5  wm-lh-parsorbitalis              112.5328    14.3860    80.0000   153.0000    73.0000 
    83. 

  83.  19 3020      2225     2320.4  wm-lh-parstriangularis           103.3101    12.4113    70.0000   150.0000    80.0000 
    84. 

  84.  20 3021      2007     1964.9  wm-lh-pericalcarine               96.5605    11.1314    55.0000   133.0000    78.0000 
    85. 

  85.  21 3022      5386     5722.1  wm-lh-postcentral                102.0795    11.9768    62.0000   149.0000    87.0000 
    86. 

  86.  22 3023      4107     4126.3  wm-lh-posteriorcingulate          95.5067    13.0505    34.0000   129.0000    95.0000 
    87. 

  87.  23 3024      9487     9945.7  wm-lh-precentral                 100.5759    11.9271    66.0000   152.0000    86.0000 
    88. 

  88.  24 3025      8024     8307.3  wm-lh-precuneus                   97.6153    11.1469    34.0000   137.0000   103.0000 
    89. 

  89.  25 3026      2148     2160.6  wm-lh-rostralanteriorcingulate   102.7523    14.3435    25.0000   138.0000   113.0000 
    90. 

  90.  26 3027      8805     9129.6  wm-lh-rostralmiddlefrontal       104.2265    12.4976    62.0000   159.0000    97.0000 
    91. 

  91.  27 3028     13654    14283.0  wm-lh-superiorfrontal             97.1630    11.2279    62.0000   140.0000    78.0000 
    92. 

  92.  28 3029      9051     9409.5  wm-lh-superiorparietal           102.2639    11.4956    63.0000   151.0000    88.0000 
    93. 

  93.  29 3030      6791     7176.0  wm-lh-superiortemporal            98.2280    11.7258    59.0000   152.0000    93.0000 
    94. 

  94.  30 3031      6980     7301.2  wm-lh-supramarginal              102.8811    11.8675    60.0000   152.0000    92.0000 
    95. 

  95.  31 3032       310      343.0  wm-lh-frontalpole                101.4871    12.0174    77.0000   141.0000    64.0000 
    96. 

  96.  32 3033       708      748.9  wm-lh-temporalpole                91.9647    11.1082    60.0000   122.0000    62.0000 
    97. 

  97.  33 3034       826      813.1  wm-lh-transversetemporal          95.3245    11.0847    71.0000   122.0000    51.0000 
    98. 

  98.  34 3035      7369     7507.1  wm-lh-insula                      89.1087    13.3080    37.0000   134.0000    97.0000 
    99. 

  99.  35 4001      1865     1879.4  wm-rh-bankssts                   101.2928    10.8688    67.0000   145.0000    78.0000 
    100. 

  100.  36 4002      2444     2513.8  wm-rh-caudalanteriorcingulate     92.1039    11.9545    42.0000   131.0000    89.0000 
    101. 

  101.  37 4003      3184     3268.2  wm-rh-caudalmiddlefrontal         95.4830    11.0774    66.0000   134.0000    68.0000 
    102. 

  102.  38 4005      1754     1837.2  wm-rh-cuneus                      98.4561    10.4612    69.0000   138.0000    69.0000 
    103. 

  103.  39 4006       566      608.4  wm-rh-entorhinal                  83.9947     9.9289    53.0000   116.0000    63.0000 
    104. 

  104.  40 4007      4610     4796.7  wm-rh-fusiform                    95.9599    10.5472    58.0000   139.0000    81.0000 
    105. 

  105.  41 4008      8511     8848.3  wm-rh-inferiorparietal           100.1334    10.5977    50.0000   139.0000    89.0000 
    106. 

  106.  42 4009      4186     4406.7  wm-rh-inferiortemporal            98.8165    12.3151    63.0000   146.0000    83.0000 
    107. 

  107.  43 4010      3181     3225.3  wm-rh-isthmuscingulate            95.4659    12.0470    17.0000   131.0000   114.0000 
    108. 

  108.  44 4011      6092     6392.6  wm-rh-lateraloccipital           103.1824    12.3503    60.0000   146.0000    86.0000 
    109. 

  109.  45 4012      5010     5058.3  wm-rh-lateralorbitofrontal        92.2383    16.0278    20.0000   138.0000   118.0000 
    110. 

  110.  46 4013      3603     3801.9  wm-rh-lingual                     90.3963    12.0639    28.0000   134.0000   106.0000 
    111. 

  111.  47 4014      2553     2711.0  wm-rh-medialorbitofrontal        101.4277    15.1216    28.0000   146.0000   118.0000 
    112. 

  112.  48 4015      4886     5097.8  wm-rh-middletemporal              99.0487    11.8724    60.0000   140.0000    80.0000 
    113. 

  113.  49 4016      1009     1178.2  wm-rh-parahippocampal             81.4440     9.2325    46.0000   110.0000    64.0000 
    114. 

  114.  50 4017      4136     4210.9  wm-rh-paracentral                 95.8612     9.3674    68.0000   132.0000    64.0000 
    115. 

  115.  51 4018      2116     2230.8  wm-rh-parsopercularis             93.2632    11.8915    64.0000   130.0000    66.0000 
    116. 

  116.  52 4019      1085     1123.7  wm-rh-parsorbitalis              106.6636    12.8320    67.0000   144.0000    77.0000 
    117. 

  117.  53 4020      2034     2104.7  wm-rh-parstriangularis            98.5128    11.6850    70.0000   147.0000    77.0000 
    118. 

  118.  54 4021      1862     1806.5  wm-rh-pericalcarine               92.7578    10.7724    45.0000   126.0000    81.0000 
    119. 

  119.  55 4022      5249     5546.8  wm-rh-postcentral                 97.8139    11.5103    64.0000   143.0000    79.0000 
    120. 

  120.  56 4023      3945     4038.6  wm-rh-posteriorcingulate          93.4938    12.8533    42.0000   136.0000    94.0000 
    121. 

  121.  57 4024      9195     9515.8  wm-rh-precentral                 100.2517    10.9126    64.0000   140.0000    76.0000 
    122. 

  122.  58 4025      8323     8660.2  wm-rh-precuneus                   98.7837    11.3025    35.0000   144.0000   109.0000 
    123. 

  123.  59 4026      1288     1298.6  wm-rh-rostralanteriorcingulate   100.7873    12.8382    38.0000   146.0000   108.0000 
    124. 

  124.  60 4027      9446     9700.6  wm-rh-rostralmiddlefrontal       101.9309    11.2621    68.0000   144.0000    76.0000 
    125. 

  125.  61 4028     12718    13363.4  wm-rh-superiorfrontal             96.5521    10.9690    61.0000   146.0000    85.0000 
    126. 

  126.  62 4029      7753     8119.6  wm-rh-superiorparietal           100.3645    10.7119    56.0000   143.0000    87.0000 
    127. 

  127.  63 4030      5286     5656.6  wm-rh-superiortemporal            91.9767    10.7409    45.0000   135.0000    90.0000 
    128. 

  128.  64 4031      6107     6285.0  wm-rh-supramarginal              102.2864    11.2932    71.0000   150.0000    79.0000 
    129. 

  129.  65 4032       482      491.8  wm-rh-frontalpole                101.9232    11.7014    78.0000   140.0000    62.0000 
    130. 

  130.  66 4033       655      709.7  wm-rh-temporalpole                92.5145    10.7902    60.0000   133.0000    73.0000 
    131. 

  131.  67 4034       523      517.2  wm-rh-transversetemporal          94.8585    10.1834    65.0000   117.0000    52.0000 
    132. 

  132.  68 4035      6626     6776.3  wm-rh-insula                      87.8053    13.0366    45.0000   126.0000    81.0000 
    133. 

  133.  69 5001     18456    18381.3  Left-UnsegmentedWhiteMatter       93.2631    13.2753    20.0000   134.0000   114.0000 
    134. 

  134.  70 5002     17961    17855.0  Right-UnsegmentedWhiteMatter      91.3076    13.7050    23.0000   136.0000   113.0000 
    135.