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ABIDE_fs-6.0.0
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0050754
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050754 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-549
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050754
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 13223.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 239273.938952, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 240137.079041, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 479411.017993, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1811845.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1721098.520654, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 02:18:06 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:19:07 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:19:07 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3313     3287.8  wm-lh-bankssts                    98.3743     9.9527    63.0000   117.0000    54.0000 
    66. 

  66.   2 3002      2962     2914.3  wm-lh-caudalanteriorcingulate    100.3845    12.0303    39.0000   123.0000    84.0000 
    67. 

  67.   3 3003      7232     7136.8  wm-lh-caudalmiddlefrontal         95.3724    13.3333    55.0000   119.0000    64.0000 
    68. 

  68.   4 3005      1987     1988.5  wm-lh-cuneus                      84.0735    12.7581    55.0000   110.0000    55.0000 
    69. 

  69.   5 3006       888      992.1  wm-lh-entorhinal                  80.4583     8.3491    55.0000   101.0000    46.0000 
    70. 

  70.   6 3007      7100     7121.5  wm-lh-fusiform                    87.8330    11.4308    53.0000   114.0000    61.0000 
    71. 

  71.   7 3008      9722     9842.1  wm-lh-inferiorparietal            94.1026    12.1570    61.0000   116.0000    55.0000 
    72. 

  72.   8 3009      6680     6861.7  wm-lh-inferiortemporal            86.1298    12.4102    54.0000   111.0000    57.0000 
    73. 

  73.   9 3010      3387     3445.9  wm-lh-isthmuscingulate           100.4818    11.2677    40.0000   119.0000    79.0000 
    74. 

  74.  10 3011      7727     7887.6  wm-lh-lateraloccipital            84.2729    12.6591    52.0000   114.0000    62.0000 
    75. 

  75.  11 3012      6882     6927.0  wm-lh-lateralorbitofrontal        93.9661    11.9471    59.0000   118.0000    59.0000 
    76. 

  76.  12 3013      4890     4886.4  wm-lh-lingual                     82.9427    12.8424    21.0000   112.0000    91.0000 
    77. 

  77.  13 3014      3417     3322.7  wm-lh-medialorbitofrontal         89.3000    12.7459    40.0000   146.0000   106.0000 
    78. 

  78.  14 3015      6289     6482.9  wm-lh-middletemporal              85.7171    13.0157    53.0000   112.0000    59.0000 
    79. 

  79.  15 3016      1702     1804.0  wm-lh-parahippocampal             83.2579     9.3189    58.0000   108.0000    50.0000 
    80. 

  80.  16 3017      4534     4486.3  wm-lh-paracentral                 91.3760    11.7698    56.0000   113.0000    57.0000 
    81. 

  81.  17 3018      4504     4486.3  wm-lh-parsopercularis             96.6923    13.0075    62.0000   120.0000    58.0000 
    82. 

  82.  18 3019      1278     1255.9  wm-lh-parsorbitalis               87.4538    13.5236    59.0000   114.0000    55.0000 
    83. 

  83.  19 3020      3591     3636.5  wm-lh-parstriangularis            94.7569    12.6900    58.0000   115.0000    57.0000 
    84. 

  84.  20 3021      2686     2435.0  wm-lh-pericalcarine               83.7841    13.2595    11.0000   112.0000   101.0000 
    85. 

  85.  21 3022      8495     8493.5  wm-lh-postcentral                 88.9347    12.8398    53.0000   120.0000    67.0000 
    86. 

  86.  22 3023      4726     4627.6  wm-lh-posteriorcingulate          99.2245    11.8746    40.0000   123.0000    83.0000 
    87. 

  87.  23 3024     12980    12956.0  wm-lh-precentral                  93.1875    12.5684    56.0000   123.0000    67.0000 
    88. 

  88.  24 3025     10618    10595.9  wm-lh-precuneus                   94.5311    12.1797    40.0000   118.0000    78.0000 
    89. 

  89.  25 3026      3421     3335.4  wm-lh-rostralanteriorcingulate    98.2517    13.9921    27.0000   145.0000   118.0000 
    90. 

  90.  26 3027     16165    16180.5  wm-lh-rostralmiddlefrontal        94.5406    12.8458    56.0000   124.0000    68.0000 
    91. 

  91.  27 3028     21417    21275.5  wm-lh-superiorfrontal             89.8402    12.9666    51.0000   117.0000    66.0000 
    92. 

  92.  28 3029     13776    13862.6  wm-lh-superiorparietal            91.3839    12.9388    57.0000   114.0000    57.0000 
    93. 

  93.  29 3030      8352     8661.1  wm-lh-superiortemporal            90.9977    12.2873    57.0000   118.0000    61.0000 
    94. 

  94.  30 3031      9890     9900.1  wm-lh-supramarginal               93.8122    13.8790    58.0000   119.0000    61.0000 
    95. 

  95.  31 3032       307      301.3  wm-lh-frontalpole                 83.3094    11.0133    56.0000   108.0000    52.0000 
    96. 

  96.  32 3033       750      797.6  wm-lh-temporalpole                73.0453     8.6921    52.0000    96.0000    44.0000 
    97. 

  97.  33 3034       997      967.4  wm-lh-transversetemporal          94.2036    10.7066    66.0000   119.0000    53.0000 
    98. 

  98.  34 3035     10967    10952.9  wm-lh-insula                      93.1588    13.3281    47.0000   119.0000    72.0000 
    99. 

  99.  35 4001      3089     3097.2  wm-rh-bankssts                    99.2509     9.6990    62.0000   117.0000    55.0000 
    100. 

  100.  36 4002      3031     2950.8  wm-rh-caudalanteriorcingulate     99.9287    13.4449    38.0000   125.0000    87.0000 
    101. 

  101.  37 4003      8084     8016.7  wm-rh-caudalmiddlefrontal         92.3597    13.1158    57.0000   120.0000    63.0000 
    102. 

  102.  38 4005      2427     2437.4  wm-rh-cuneus                      84.0527    11.6791    52.0000   110.0000    58.0000 
    103. 

  103.  39 4006       847      891.1  wm-rh-entorhinal                  78.2538     9.3412    51.0000   109.0000    58.0000 
    104. 

  104.  40 4007      7427     7520.5  wm-rh-fusiform                    90.1752    11.9050     5.0000   116.0000   111.0000 
    105. 

  105.  41 4008     11644    11748.8  wm-rh-inferiorparietal            91.9505    13.0212    55.0000   115.0000    60.0000 
    106. 

  106.  42 4009      6295     6521.4  wm-rh-inferiortemporal            86.6937    12.8659    51.0000   120.0000    69.0000 
    107. 

  107.  43 4010      2465     2518.2  wm-rh-isthmuscingulate           100.5955    10.4353    41.0000   118.0000    77.0000 
    108. 

  108.  44 4011      9064     9134.1  wm-rh-lateraloccipital            87.1497    12.7347    46.0000   112.0000    66.0000 
    109. 

  109.  45 4012      5881     5864.3  wm-rh-lateralorbitofrontal        90.7407    12.7708    53.0000   114.0000    61.0000 
    110. 

  110.  46 4013      4867     4902.2  wm-rh-lingual                     83.8128    12.6143     4.0000   115.0000   111.0000 
    111. 

  111.  47 4014      3905     3903.8  wm-rh-medialorbitofrontal         92.2289    12.9552    49.0000   117.0000    68.0000 
    112. 

  112.  48 4015      6965     7126.1  wm-rh-middletemporal              88.6073    13.4998    54.0000   118.0000    64.0000 
    113. 

  113.  49 4016      1737     1800.7  wm-rh-parahippocampal             85.0507    10.3213    41.0000   115.0000    74.0000 
    114. 

  114.  50 4017      5595     5479.8  wm-rh-paracentral                 91.8240    12.0424    58.0000   114.0000    56.0000 
    115. 

  115.  51 4018      4455     4426.3  wm-rh-parsopercularis             94.0150    11.0934    58.0000   117.0000    59.0000 
    116. 

  116.  52 4019      1292     1316.4  wm-rh-parsorbitalis               87.3731    12.1945    60.0000   109.0000    49.0000 
    117. 

  117.  53 4020      3704     3688.2  wm-rh-parstriangularis            91.5740    12.6543    61.0000   111.0000    50.0000 
    118. 

  118.  54 4021      2604     2488.5  wm-rh-pericalcarine               81.6310    14.3892     2.0000   106.0000   104.0000 
    119. 

  119.  55 4022      8714     8770.0  wm-rh-postcentral                 88.7260    11.7580    59.0000   115.0000    56.0000 
    120. 

  120.  56 4023      4720     4602.2  wm-rh-posteriorcingulate          98.0547    12.4706    40.0000   120.0000    80.0000 
    121. 

  121.  57 4024     14324    14271.5  wm-rh-precentral                  92.3230    12.8486    58.0000   123.0000    65.0000 
    122. 

  122.  58 4025     11851    11708.6  wm-rh-precuneus                   94.3859    13.6307     3.0000   117.0000   114.0000 
    123. 

  123.  59 4026      2314     2245.8  wm-rh-rostralanteriorcingulate    99.5104    13.1594    48.0000   123.0000    75.0000 
    124. 

  124.  60 4027     15334    15242.5  wm-rh-rostralmiddlefrontal        92.8222    12.4171    54.0000   118.0000    64.0000 
    125. 

  125.  61 4028     20907    20820.1  wm-rh-superiorfrontal             91.1524    13.1210    53.0000   121.0000    68.0000 
    126. 

  126.  62 4029     11656    11779.8  wm-rh-superiorparietal            90.8574    12.7282    57.0000   114.0000    57.0000 
    127. 

  127.  63 4030      7223     7450.4  wm-rh-superiortemporal            90.7786    12.0413    56.0000   117.0000    61.0000 
    128. 

  128.  64 4031      9834     9837.6  wm-rh-supramarginal               94.6450    12.4519    58.0000   116.0000    58.0000 
    129. 

  129.  65 4032       448      444.9  wm-rh-frontalpole                 84.5982    11.3210    63.0000   111.0000    48.0000 
    130. 

  130.  66 4033       732      760.2  wm-rh-temporalpole                75.9549     9.8533    55.0000   101.0000    46.0000 
    131. 

  131.  67 4034       827      783.1  wm-rh-transversetemporal          92.5054    10.3742    66.0000   118.0000    52.0000 
    132. 

  132.  68 4035     11049    10957.2  wm-rh-insula                      88.6795    13.9315    29.0000   116.0000    87.0000 
    133. 

  133.  69 5001     24139    23925.1  Left-UnsegmentedWhiteMatter       98.9545    12.1724    20.0000   122.0000   102.0000 
    134. 

  134.  70 5002     23236    23347.3  Right-UnsegmentedWhiteMatter      98.6166    11.2237    19.0000   119.0000   100.0000 
    135.