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ABIDE_fs-6.0.0
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0050690
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050690 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-611
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050690
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 9764.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 235802.380976, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 240749.093956, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 476551.474931, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1635997.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1415346.356395, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 01:13:58 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 17:03:47 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 17:03:47 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2747     2727.0  wm-lh-bankssts                    95.4674    10.5869    66.0000   111.0000    45.0000 
    66. 

  66.   2 3002      2712     2678.5  wm-lh-caudalanteriorcingulate    101.6810     9.4631    48.0000   120.0000    72.0000 
    67. 

  67.   3 3003      5203     5079.3  wm-lh-caudalmiddlefrontal         94.4984    11.0391    63.0000   113.0000    50.0000 
    68. 

  68.   4 3005      2953     2931.1  wm-lh-cuneus                      92.0505    10.5083    59.0000   110.0000    51.0000 
    69. 

  69.   5 3006      1028     1080.3  wm-lh-entorhinal                  79.9961     8.6109    60.0000    99.0000    39.0000 
    70. 

  70.   6 3007      7785     7783.1  wm-lh-fusiform                    89.9961    10.2916    37.0000   109.0000    72.0000 
    71. 

  71.   7 3008      9922     9859.5  wm-lh-inferiorparietal            94.7390    10.8757    62.0000   112.0000    50.0000 
    72. 

  72.   8 3009      7237     7310.7  wm-lh-inferiortemporal            90.2725    11.1007    58.0000   111.0000    53.0000 
    73. 

  73.   9 3010      3323     3370.4  wm-lh-isthmuscingulate           101.7108     9.1061    55.0000   121.0000    66.0000 
    74. 

  74.  10 3011      9811     9864.5  wm-lh-lateraloccipital            90.2247    10.7309    59.0000   112.0000    53.0000 
    75. 

  75.  11 3012      6589     6557.0  wm-lh-lateralorbitofrontal        95.7746    11.2798    62.0000   116.0000    54.0000 
    76. 

  76.  12 3013      5293     5297.2  wm-lh-lingual                     86.0905    10.4752    38.0000   110.0000    72.0000 
    77. 

  77.  13 3014      2905     2925.1  wm-lh-medialorbitofrontal         98.3391    11.3790    60.0000   134.0000    74.0000 
    78. 

  78.  14 3015      6950     7157.0  wm-lh-middletemporal              94.3140    10.1976    64.0000   113.0000    49.0000 
    79. 

  79.  15 3016      1655     1732.0  wm-lh-parahippocampal             84.5172     8.4481    46.0000   103.0000    57.0000 
    80. 

  80.  16 3017      4755     4703.3  wm-lh-paracentral                 93.4175     9.5831    65.0000   112.0000    47.0000 
    81. 

  81.  17 3018      3244     3218.2  wm-lh-parsopercularis             94.5136    10.8015    65.0000   114.0000    49.0000 
    82. 

  82.  18 3019       899      907.0  wm-lh-parsorbitalis               89.4316    10.5779    67.0000   110.0000    43.0000 
    83. 

  83.  19 3020      3209     3193.7  wm-lh-parstriangularis            94.3743    10.1531    67.0000   109.0000    42.0000 
    84. 

  84.  20 3021      3702     3512.9  wm-lh-pericalcarine               89.5140    10.6036    40.0000   110.0000    70.0000 
    85. 

  85.  21 3022      9315     9390.5  wm-lh-postcentral                 91.7579    10.7448    61.0000   114.0000    53.0000 
    86. 

  86.  22 3023      4866     4745.4  wm-lh-posteriorcingulate         101.3298    10.6382    38.0000   119.0000    81.0000 
    87. 

  87.  23 3024     12725    12672.6  wm-lh-precentral                  94.4342     9.5621    62.0000   113.0000    51.0000 
    88. 

  88.  24 3025      9956     9854.2  wm-lh-precuneus                   96.9524    10.4206    40.0000   118.0000    78.0000 
    89. 

  89.  25 3026      2778     2669.2  wm-lh-rostralanteriorcingulate    95.0436    16.6655    23.0000   134.0000   111.0000 
    90. 

  90.  26 3027     13017    12799.1  wm-lh-rostralmiddlefrontal        96.1200    11.0693    60.0000   115.0000    55.0000 
    91. 

  91.  27 3028     16947    16780.6  wm-lh-superiorfrontal             93.8955    11.3783    49.0000   115.0000    66.0000 
    92. 

  92.  28 3029     13744    13662.8  wm-lh-superiorparietal            94.9115    10.9647    62.0000   118.0000    56.0000 
    93. 

  93.  29 3030      6709     6980.3  wm-lh-superiortemporal            95.0963    10.2908    62.0000   117.0000    55.0000 
    94. 

  94.  30 3031      8638     8680.2  wm-lh-supramarginal               97.9911    11.2096    65.0000   119.0000    54.0000 
    95. 

  95.  31 3032       346      332.0  wm-lh-frontalpole                 87.0896     9.6984    65.0000   106.0000    41.0000 
    96. 

  96.  32 3033       833      882.9  wm-lh-temporalpole                77.4274     9.8174    57.0000   104.0000    47.0000 
    97. 

  97.  33 3034       829      816.3  wm-lh-transversetemporal          97.7636     8.7647    70.0000   110.0000    40.0000 
    98. 

  98.  34 3035     10236    10026.1  wm-lh-insula                      92.0788    11.8229    28.0000   128.0000   100.0000 
    99. 

  99.  35 4001      3480     3430.7  wm-rh-bankssts                    99.3218     8.8529    66.0000   113.0000    47.0000 
    100. 

  100.  36 4002      2678     2634.0  wm-rh-caudalanteriorcingulate     98.3391    10.4774    56.0000   117.0000    61.0000 
    101. 

  101.  37 4003      4762     4714.8  wm-rh-caudalmiddlefrontal         95.6136    11.3219    60.0000   114.0000    54.0000 
    102. 

  102.  38 4005      2862     2865.9  wm-rh-cuneus                      91.3026    11.2056    61.0000   111.0000    50.0000 
    103. 

  103.  39 4006       848      924.9  wm-rh-entorhinal                  81.0189     8.4942    59.0000   102.0000    43.0000 
    104. 

  104.  40 4007      6805     6915.0  wm-rh-fusiform                    91.4987     9.4590    56.0000   114.0000    58.0000 
    105. 

  105.  41 4008     11551    11542.9  wm-rh-inferiorparietal            93.8657    11.2400    62.0000   113.0000    51.0000 
    106. 

  106.  42 4009      6912     7010.2  wm-rh-inferiortemporal            91.2763    11.3996    57.0000   119.0000    62.0000 
    107. 

  107.  43 4010      3334     3354.3  wm-rh-isthmuscingulate           101.0342     8.6754    66.0000   119.0000    53.0000 
    108. 

  108.  44 4011     11061    11098.4  wm-rh-lateraloccipital            91.3649    10.7507    57.0000   111.0000    54.0000 
    109. 

  109.  45 4012      6699     6611.8  wm-rh-lateralorbitofrontal        91.3951    12.4285    49.0000   110.0000    61.0000 
    110. 

  110.  46 4013      6065     6085.2  wm-rh-lingual                     87.3914    11.0352    24.0000   110.0000    86.0000 
    111. 

  111.  47 4014      3754     3785.0  wm-rh-medialorbitofrontal         95.3641    10.7576    52.0000   123.0000    71.0000 
    112. 

  112.  48 4015      6848     7015.6  wm-rh-middletemporal              91.0606    11.3956    61.0000   115.0000    54.0000 
    113. 

  113.  49 4016      1689     1731.5  wm-rh-parahippocampal             86.7732     9.4258    35.0000   113.0000    78.0000 
    114. 

  114.  50 4017      4745     4712.8  wm-rh-paracentral                 94.1416     8.7027    65.0000   111.0000    46.0000 
    115. 

  115.  51 4018      2614     2646.1  wm-rh-parsopercularis             95.6121    10.9696    66.0000   112.0000    46.0000 
    116. 

  116.  52 4019      1471     1471.0  wm-rh-parsorbitalis               87.1509    11.1375    60.0000   110.0000    50.0000 
    117. 

  117.  53 4020      3435     3349.6  wm-rh-parstriangularis            94.0067    11.3170    60.0000   110.0000    50.0000 
    118. 

  118.  54 4021      4210     3869.3  wm-rh-pericalcarine               87.7577    11.8091    16.0000   110.0000    94.0000 
    119. 

  119.  55 4022      7548     7463.5  wm-rh-postcentral                 91.4087    11.1931    61.0000   114.0000    53.0000 
    120. 

  120.  56 4023      4052     3987.3  wm-rh-posteriorcingulate          99.4089    11.0971    40.0000   119.0000    79.0000 
    121. 

  121.  57 4024     13645    13686.6  wm-rh-precentral                  91.8674    13.2702     8.0000   112.0000   104.0000 
    122. 

  122.  58 4025     11773    11728.1  wm-rh-precuneus                   96.2952     9.5098    62.0000   116.0000    54.0000 
    123. 

  123.  59 4026      1799     1749.0  wm-rh-rostralanteriorcingulate    95.5787    12.2566    54.0000   115.0000    61.0000 
    124. 

  124.  60 4027     14412    14246.2  wm-rh-rostralmiddlefrontal        94.3672    11.5056    56.0000   112.0000    56.0000 
    125. 

  125.  61 4028     17110    17001.8  wm-rh-superiorfrontal             92.7557    10.1556    57.0000   113.0000    56.0000 
    126. 

  126.  62 4029     14935    14824.5  wm-rh-superiorparietal            92.4183    10.2365    60.0000   115.0000    55.0000 
    127. 

  127.  63 4030      6117     6417.7  wm-rh-superiortemporal            94.2143    10.1923    61.0000   119.0000    58.0000 
    128. 

  128.  64 4031      9644     9698.1  wm-rh-supramarginal               97.3917    10.9315    61.0000   115.0000    54.0000 
    129. 

  129.  65 4032       323      320.7  wm-rh-frontalpole                 88.8947    10.1953    64.0000   111.0000    47.0000 
    130. 

  130.  66 4033       843      883.0  wm-rh-temporalpole                81.8185     9.4033    60.0000   105.0000    45.0000 
    131. 

  131.  67 4034       635      626.2  wm-rh-transversetemporal          95.2819     9.5421    72.0000   115.0000    43.0000 
    132. 

  132.  68 4035      9051     8909.4  wm-rh-insula                      89.6727    12.5232    43.0000   113.0000    70.0000 
    133. 

  133.  69 5001     31919    32310.7  Left-UnsegmentedWhiteMatter      100.7412    10.7677    22.0000   122.0000   100.0000 
    134. 

  134.  70 5002     30858    31154.2  Right-UnsegmentedWhiteMatter      99.5919     9.7019    17.0000   118.0000   101.0000 
    135.