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ABIDE_fs-6.0.0
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0050612
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050612 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-599
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050612
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 14327.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 226475.665762, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 233634.444061, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 460110.109823, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1775832.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1510207.463666, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 10:03:29 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/08 02:13:06 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/08 02:13:06 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3077     3067.0  wm-lh-bankssts                   100.3692    10.3770    71.0000   123.0000    52.0000 
    66. 

  66.   2 3002      2275     2257.4  wm-lh-caudalanteriorcingulate    104.9688     9.5856    66.0000   127.0000    61.0000 
    67. 

  67.   3 3003      6112     6004.2  wm-lh-caudalmiddlefrontal        100.1464    10.9150    68.0000   120.0000    52.0000 
    68. 

  68.   4 3005      3025     2955.4  wm-lh-cuneus                      89.8572    10.0234    66.0000   114.0000    48.0000 
    69. 

  69.   5 3006       850      879.4  wm-lh-entorhinal                  78.8682     8.8374    56.0000   103.0000    47.0000 
    70. 

  70.   6 3007      6652     6631.8  wm-lh-fusiform                    89.8611    11.3956    56.0000   115.0000    59.0000 
    71. 

  71.   7 3008      8310     8443.1  wm-lh-inferiorparietal            95.3020    11.7429    67.0000   121.0000    54.0000 
    72. 

  72.   8 3009      6013     6023.9  wm-lh-inferiortemporal            87.1758    13.3303    59.0000   117.0000    58.0000 
    73. 

  73.   9 3010      3744     3680.1  wm-lh-isthmuscingulate           104.5823    11.0327    47.0000   126.0000    79.0000 
    74. 

  74.  10 3011     10581    10837.3  wm-lh-lateraloccipital            88.6922    11.1979    60.0000   119.0000    59.0000 
    75. 

  75.  11 3012      6291     6174.0  wm-lh-lateralorbitofrontal        95.5069    11.3545    64.0000   120.0000    56.0000 
    76. 

  76.  12 3013      6009     5977.4  wm-lh-lingual                     87.4039    11.8860    21.0000   115.0000    94.0000 
    77. 

  77.  13 3014      4045     3967.4  wm-lh-medialorbitofrontal         94.3019    12.2474    36.0000   122.0000    86.0000 
    78. 

  78.  14 3015      3590     3726.7  wm-lh-middletemporal              87.0039    11.3027    62.0000   119.0000    57.0000 
    79. 

  79.  15 3016      1406     1517.8  wm-lh-parahippocampal             92.0114     8.1574    69.0000   113.0000    44.0000 
    80. 

  80.  16 3017      5007     4911.0  wm-lh-paracentral                 93.8678    10.8861    65.0000   117.0000    52.0000 
    81. 

  81.  17 3018      2749     2743.8  wm-lh-parsopercularis             95.0255    12.7875    66.0000   120.0000    54.0000 
    82. 

  82.  18 3019       748      789.9  wm-lh-parsorbitalis               86.8904    11.1265    66.0000   115.0000    49.0000 
    83. 

  83.  19 3020      2146     2196.6  wm-lh-parstriangularis            95.9870    11.8066    65.0000   117.0000    52.0000 
    84. 

  84.  20 3021      4564     4410.1  wm-lh-pericalcarine               90.6242    13.1947     8.0000   116.0000   108.0000 
    85. 

  85.  21 3022      6939     6975.2  wm-lh-postcentral                 88.0419    10.9077    60.0000   119.0000    59.0000 
    86. 

  86.  22 3023      4699     4595.8  wm-lh-posteriorcingulate         102.1637    12.3247    43.0000   124.0000    81.0000 
    87. 

  87.  23 3024     13882    13652.7  wm-lh-precentral                  94.5278    11.5887    63.0000   120.0000    57.0000 
    88. 

  88.  24 3025      8725     8670.9  wm-lh-precuneus                   97.3971    11.6885    38.0000   127.0000    89.0000 
    89. 

  89.  25 3026      2248     2130.8  wm-lh-rostralanteriorcingulate   100.3634    16.4297    39.0000   128.0000    89.0000 
    90. 

  90.  26 3027     12214    12280.2  wm-lh-rostralmiddlefrontal        97.1013    10.5549    68.0000   121.0000    53.0000 
    91. 

  91.  27 3028     21090    20896.4  wm-lh-superiorfrontal             93.2018    10.7838    65.0000   116.0000    51.0000 
    92. 

  92.  28 3029     12836    12787.9  wm-lh-superiorparietal            94.4402    11.9692    66.0000   120.0000    54.0000 
    93. 

  93.  29 3030      7078     7117.0  wm-lh-superiortemporal            93.4874    13.4845    60.0000   123.0000    63.0000 
    94. 

  94.  30 3031      7712     7610.9  wm-lh-supramarginal               93.4527    12.9446    62.0000   121.0000    59.0000 
    95. 

  95.  31 3032       311      296.7  wm-lh-frontalpole                 86.8617     9.9348    68.0000   108.0000    40.0000 
    96. 

  96.  32 3033       900      941.7  wm-lh-temporalpole                75.8633     8.2932    60.0000   100.0000    40.0000 
    97. 

  97.  33 3034       707      684.7  wm-lh-transversetemporal          95.1372    11.8505    70.0000   121.0000    51.0000 
    98. 

  98.  34 3035      8536     8359.1  wm-lh-insula                      95.0114    13.4719    62.0000   123.0000    61.0000 
    99. 

  99.  35 4001      2685     2691.9  wm-rh-bankssts                   100.4078     8.4516    71.0000   118.0000    47.0000 
    100. 

  100.  36 4002      2655     2661.0  wm-rh-caudalanteriorcingulate    103.1654    10.3187    71.0000   124.0000    53.0000 
    101. 

  101.  37 4003      6247     6123.8  wm-rh-caudalmiddlefrontal         96.4428    10.7121    67.0000   117.0000    50.0000 
    102. 

  102.  38 4005      3263     3280.7  wm-rh-cuneus                      89.1238     8.6754    66.0000   114.0000    48.0000 
    103. 

  103.  39 4006       833      877.8  wm-rh-entorhinal                  77.2701     8.6721    58.0000   105.0000    47.0000 
    104. 

  104.  40 4007      6594     6551.8  wm-rh-fusiform                    85.1644    10.8774     7.0000   116.0000   109.0000 
    105. 

  105.  41 4008     10472    10499.5  wm-rh-inferiorparietal            92.5029    10.2877    65.0000   116.0000    51.0000 
    106. 

  106.  42 4009      6951     7045.1  wm-rh-inferiortemporal            87.2615    12.1027    58.0000   113.0000    55.0000 
    107. 

  107.  43 4010      3324     3321.9  wm-rh-isthmuscingulate           101.4576    10.2920    45.0000   121.0000    76.0000 
    108. 

  108.  44 4011     10267    10462.0  wm-rh-lateraloccipital            89.3222    10.0024    60.0000   113.0000    53.0000 
    109. 

  109.  45 4012      6602     6507.5  wm-rh-lateralorbitofrontal        93.2045    11.3664    60.0000   116.0000    56.0000 
    110. 

  110.  46 4013      6026     6032.5  wm-rh-lingual                     84.3195    12.2462     8.0000   112.0000   104.0000 
    111. 

  111.  47 4014      4228     4085.8  wm-rh-medialorbitofrontal         90.7462    13.9359    29.0000   116.0000    87.0000 
    112. 

  112.  48 4015      5996     6199.1  wm-rh-middletemporal              89.4199    11.5693    62.0000   116.0000    54.0000 
    113. 

  113.  49 4016      1454     1517.4  wm-rh-parahippocampal             89.3982     9.1170    33.0000   114.0000    81.0000 
    114. 

  114.  50 4017      5103     4964.6  wm-rh-paracentral                 91.7127     9.6116    62.0000   111.0000    49.0000 
    115. 

  115.  51 4018      2821     2838.1  wm-rh-parsopercularis             97.9546    11.2696    67.0000   118.0000    51.0000 
    116. 

  116.  52 4019       957      998.0  wm-rh-parsorbitalis               86.6353     9.2553    69.0000   112.0000    43.0000 
    117. 

  117.  53 4020      2634     2701.0  wm-rh-parstriangularis            97.0607     9.5694    73.0000   114.0000    41.0000 
    118. 

  118.  54 4021      4545     4356.0  wm-rh-pericalcarine               85.2651    14.9094     5.0000   114.0000   109.0000 
    119. 

  119.  55 4022      8378     8497.8  wm-rh-postcentral                 89.9692    10.4027    63.0000   116.0000    53.0000 
    120. 

  120.  56 4023      4088     4044.7  wm-rh-posteriorcingulate         100.8498    10.3650    41.0000   125.0000    84.0000 
    121. 

  121.  57 4024     14944    14839.5  wm-rh-precentral                  93.3023    10.0350    64.0000   118.0000    54.0000 
    122. 

  122.  58 4025     10614    10449.7  wm-rh-precuneus                   94.1954    10.5689    22.0000   117.0000    95.0000 
    123. 

  123.  59 4026      1786     1774.2  wm-rh-rostralanteriorcingulate   106.6036    11.2008    58.0000   133.0000    75.0000 
    124. 

  124.  60 4027     11760    11840.0  wm-rh-rostralmiddlefrontal        94.4757    10.2985    68.0000   117.0000    49.0000 
    125. 

  125.  61 4028     18271    18139.2  wm-rh-superiorfrontal             91.4906    10.6856    63.0000   114.0000    51.0000 
    126. 

  126.  62 4029     13344    13384.4  wm-rh-superiorparietal            90.5231    10.8978    64.0000   118.0000    54.0000 
    127. 

  127.  63 4030      6659     6893.9  wm-rh-superiortemporal            90.8163    11.9608    60.0000   118.0000    58.0000 
    128. 

  128.  64 4031      9261     9306.7  wm-rh-supramarginal               96.3426    12.0570    62.0000   117.0000    55.0000 
    129. 

  129.  65 4032       322      342.8  wm-rh-frontalpole                 83.5528     8.4610    68.0000   109.0000    41.0000 
    130. 

  130.  66 4033       699      732.2  wm-rh-temporalpole                73.6695     6.9788    58.0000    95.0000    37.0000 
    131. 

  131.  67 4034       747      719.2  wm-rh-transversetemporal          96.4056    10.6930    71.0000   115.0000    44.0000 
    132. 

  132.  68 4035      9470     9324.5  wm-rh-insula                      91.7257    12.5313    33.0000   118.0000    85.0000 
    133. 

  133.  69 5001     29478    29370.7  Left-UnsegmentedWhiteMatter      103.4908    11.5455    30.0000   126.0000    96.0000 
    134. 

  134.  70 5002     28481    28204.1  Right-UnsegmentedWhiteMatter      99.6061    11.0557    29.0000   126.0000    97.0000 
    135.