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ABIDE_fs-6.0.0
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0050316
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050316 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-950
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050316
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 19041.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 223989.535756, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 225584.878551, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 449574.414307, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1553043.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1504907.101328, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/10 11:03:09 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/09 14:55:04 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/09 14:55:04 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      2479     2433.6  wm-lh-bankssts                   102.7600     8.9391    78.0000   131.0000    53.0000 
    66. 

  66.   2 3002      2583     2543.3  wm-lh-caudalanteriorcingulate    101.5300     9.1258    59.0000   126.0000    67.0000 
    67. 

  67.   3 3003      6659     6691.5  wm-lh-caudalmiddlefrontal         98.0838     7.9474    76.0000   127.0000    51.0000 
    68. 

  68.   4 3005      2179     2202.3  wm-lh-cuneus                      93.7802     8.8040    72.0000   125.0000    53.0000 
    69. 

  69.   5 3006       552      584.9  wm-lh-entorhinal                  86.4529     8.2698    67.0000   121.0000    54.0000 
    70. 

  70.   6 3007      6266     6282.4  wm-lh-fusiform                    91.5426     9.1421    59.0000   128.0000    69.0000 
    71. 

  71.   7 3008      8653     8674.3  wm-lh-inferiorparietal            99.7061     8.9941    74.0000   130.0000    56.0000 
    72. 

  72.   8 3009      5536     5611.8  wm-lh-inferiortemporal            95.2328     8.7043    69.0000   141.0000    72.0000 
    73. 

  73.   9 3010      3269     3239.6  wm-lh-isthmuscingulate            98.0737    10.5373    52.0000   132.0000    80.0000 
    74. 

  74.  10 3011      9607     9781.1  wm-lh-lateraloccipital            91.5892     9.0163    66.0000   120.0000    54.0000 
    75. 

  75.  11 3012      7475     7513.9  wm-lh-lateralorbitofrontal       100.2811     8.8225    72.0000   132.0000    60.0000 
    76. 

  76.  12 3013      5013     5023.2  wm-lh-lingual                     86.0407     9.0186    25.0000   112.0000    87.0000 
    77. 

  77.  13 3014      4073     3990.0  wm-lh-medialorbitofrontal         95.0845    11.2162    40.0000   160.0000   120.0000 
    78. 

  78.  14 3015      3677     3974.2  wm-lh-middletemporal              94.2706     7.8913    73.0000   120.0000    47.0000 
    79. 

  79.  15 3016      1664     1783.5  wm-lh-parahippocampal             84.0421     6.8589    47.0000   104.0000    57.0000 
    80. 

  80.  16 3017      3781     3745.2  wm-lh-paracentral                 99.2349     8.1398    77.0000   133.0000    56.0000 
    81. 

  81.  17 3018      2876     2942.5  wm-lh-parsopercularis            101.9990     8.4740    79.0000   127.0000    48.0000 
    82. 

  82.  18 3019      1494     1536.9  wm-lh-parsorbitalis              102.3956     8.8764    80.0000   134.0000    54.0000 
    83. 

  83.  19 3020      3172     3171.4  wm-lh-parstriangularis           102.3938     8.5676    78.0000   133.0000    55.0000 
    84. 

  84.  20 3021      2743     2640.8  wm-lh-pericalcarine               89.5359    10.4837    16.0000   117.0000   101.0000 
    85. 

  85.  21 3022      6356     6643.5  wm-lh-postcentral                103.1021     9.4381    77.0000   139.0000    62.0000 
    86. 

  86.  22 3023      4714     4617.7  wm-lh-posteriorcingulate          95.1606     9.5599    47.0000   120.0000    73.0000 
    87. 

  87.  23 3024     12647    12833.0  wm-lh-precentral                 101.4174     8.5589    76.0000   135.0000    59.0000 
    88. 

  88.  24 3025      8745     8645.0  wm-lh-precuneus                   98.2900     9.8628    53.0000   130.0000    77.0000 
    89. 

  89.  25 3026      2758     2634.1  wm-lh-rostralanteriorcingulate    97.6969    12.3545    51.0000   127.0000    76.0000 
    90. 

  90.  26 3027     13793    14042.3  wm-lh-rostralmiddlefrontal       100.5470     8.6478    76.0000   134.0000    58.0000 
    91. 

  91.  27 3028     17226    17579.5  wm-lh-superiorfrontal            100.9456     8.8630    75.0000   138.0000    63.0000 
    92. 

  92.  28 3029     12749    13000.7  wm-lh-superiorparietal           100.1657     8.3220    69.0000   131.0000    62.0000 
    93. 

  93.  29 3030      8587     8817.2  wm-lh-superiortemporal           101.1052     9.8035    53.0000   142.0000    89.0000 
    94. 

  94.  30 3031      9841    10004.1  wm-lh-supramarginal              102.2743     9.1298    73.0000   133.0000    60.0000 
    95. 

  95.  31 3032       273      284.8  wm-lh-frontalpole                105.7729    13.9574    79.0000   148.0000    69.0000 
    96. 

  96.  32 3033       500      512.4  wm-lh-temporalpole                90.1000     9.8897    67.0000   127.0000    60.0000 
    97. 

  97.  33 3034       665      668.7  wm-lh-transversetemporal          96.8045     7.9718    78.0000   127.0000    49.0000 
    98. 

  98.  34 3035      8887     8767.9  wm-lh-insula                      95.0448    10.0923    39.0000   130.0000    91.0000 
    99. 

  99.  35 4001      1997     1955.9  wm-rh-bankssts                   101.9740     8.4011    80.0000   130.0000    50.0000 
    100. 

  100.  36 4002      2203     2165.2  wm-rh-caudalanteriorcingulate    102.9260    11.8815    52.0000   144.0000    92.0000 
    101. 

  101.  37 4003      6831     7001.5  wm-rh-caudalmiddlefrontal         99.1303     8.0964    65.0000   128.0000    63.0000 
    102. 

  102.  38 4005      2227     2264.0  wm-rh-cuneus                      91.8868     9.1277    49.0000   122.0000    73.0000 
    103. 

  103.  39 4006       621      636.3  wm-rh-entorhinal                  87.2432     9.0917    53.0000   120.0000    67.0000 
    104. 

  104.  40 4007      6225     6177.5  wm-rh-fusiform                    90.6068     8.7535    67.0000   130.0000    63.0000 
    105. 

  105.  41 4008     10391    10683.1  wm-rh-inferiorparietal            99.6124     8.1977    75.0000   130.0000    55.0000 
    106. 

  106.  42 4009      4918     5000.2  wm-rh-inferiortemporal            93.6305     8.6605    70.0000   144.0000    74.0000 
    107. 

  107.  43 4010      3266     3233.6  wm-rh-isthmuscingulate            98.9862    10.3081    38.0000   130.0000    92.0000 
    108. 

  108.  44 4011      9532     9925.4  wm-rh-lateraloccipital            93.2860     8.2808    57.0000   131.0000    74.0000 
    109. 

  109.  45 4012      7334     7367.2  wm-rh-lateralorbitofrontal        99.7517    10.1664    45.0000   137.0000    92.0000 
    110. 

  110.  46 4013      5480     5653.7  wm-rh-lingual                     87.7642     8.4624    20.0000   114.0000    94.0000 
    111. 

  111.  47 4014      4491     4433.3  wm-rh-medialorbitofrontal         95.5150    12.5673    36.0000   135.0000    99.0000 
    112. 

  112.  48 4015      5517     5729.9  wm-rh-middletemporal              95.0248     8.4868    72.0000   146.0000    74.0000 
    113. 

  113.  49 4016      1532     1662.6  wm-rh-parahippocampal             85.1149     7.8705    51.0000   112.0000    61.0000 
    114. 

  114.  50 4017      5009     4972.0  wm-rh-paracentral                 99.0477     8.2041    78.0000   135.0000    57.0000 
    115. 

  115.  51 4018      3612     3658.2  wm-rh-parsopercularis             99.6988    10.7863    39.0000   122.0000    83.0000 
    116. 

  116.  52 4019      1469     1512.4  wm-rh-parsorbitalis               99.9551     9.5420    80.0000   127.0000    47.0000 
    117. 

  117.  53 4020      3154     3216.6  wm-rh-parstriangularis           103.4810     8.3624    81.0000   136.0000    55.0000 
    118. 

  118.  54 4021      2812     2706.4  wm-rh-pericalcarine               88.4292     8.5974    33.0000   113.0000    80.0000 
    119. 

  119.  55 4022      7616     7718.5  wm-rh-postcentral                100.1717     9.9681    57.0000   142.0000    85.0000 
    120. 

  120.  56 4023      4236     4183.9  wm-rh-posteriorcingulate          94.4327     9.3895    43.0000   138.0000    95.0000 
    121. 

  121.  57 4024     13999    14012.0  wm-rh-precentral                 100.5158     9.1469    60.0000   141.0000    81.0000 
    122. 

  122.  58 4025      8683     8636.5  wm-rh-precuneus                   96.5256     8.9530    29.0000   133.0000   104.0000 
    123. 

  123.  59 4026      1614     1545.1  wm-rh-rostralanteriorcingulate    98.5285    10.9246    58.0000   127.0000    69.0000 
    124. 

  124.  60 4027     13106    13389.9  wm-rh-rostralmiddlefrontal       101.2638     8.5145    77.0000   129.0000    52.0000 
    125. 

  125.  61 4028     18623    18842.9  wm-rh-superiorfrontal            100.9704     8.7470    75.0000   135.0000    60.0000 
    126. 

  126.  62 4029     10163    10357.1  wm-rh-superiorparietal            99.3096     7.8872    75.0000   135.0000    60.0000 
    127. 

  127.  63 4030      6826     6902.4  wm-rh-superiortemporal            99.5541     9.6885    58.0000   149.0000    91.0000 
    128. 

  128.  64 4031      9070     9070.8  wm-rh-supramarginal              100.9928     8.4027    77.0000   131.0000    54.0000 
    129. 

  129.  65 4032       398      401.2  wm-rh-frontalpole                101.1457     8.8360    80.0000   130.0000    50.0000 
    130. 

  130.  66 4033       639      712.4  wm-rh-temporalpole                93.6197     9.9275    64.0000   126.0000    62.0000 
    131. 

  131.  67 4034       647      614.6  wm-rh-transversetemporal          98.4915     8.7460    79.0000   124.0000    45.0000 
    132. 

  132.  68 4035      9566     9368.6  wm-rh-insula                      93.1154     9.0309    48.0000   146.0000    98.0000 
    133. 

  133.  69 5001     30834    30399.9  Left-UnsegmentedWhiteMatter       98.7454    10.2911    34.0000   129.0000    95.0000 
    134. 

  134.  70 5002     30597    30123.3  Right-UnsegmentedWhiteMatter      96.3566    11.9532    19.0000   128.0000   109.0000 
    135.