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ABIDE_fs-6.0.0
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0050144
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stats
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wmparc.stats

wmparc.stats 11 KB
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  1. # Title Segmentation Statistics 
    2. 

  2. # 
    3. 

  3. # generating_program mri_segstats
    4. 

  4. # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $
    5. 

  5. # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050144 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv 
    6. 

  6. # sysname  Linux
    7. 

  7. # hostname tars-951
    8. 

  8. # machine  x86_64
    9. 

  9. # user     ntraut
    10. 

  10. # anatomy_type volume
    11. 

  11. # 
    12. 

  12. # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0
    13. 

  13. # subjectname 0050144
    14. 

  14. # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 7744.000000, mm^3
    15. 

  15. # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 260056.724887, mm^3
    16. 

  16. # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 263832.275516, mm^3
    17. 

  17. # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 523889.000403, mm^3
    18. 

  18. # Measure Mask, MaskVol, Mask Volume, 1926696.000000, mm^3
    19. 

  19. # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1811023.126590, mm^3
    20. 

  20. # SegVolFile mri/wmparc.mgz 
    21. 

  21. # SegVolFileTimeStamp  2017/10/08 03:49:49 
    22. 

  22. # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt 
    23. 

  23. # ColorTableTimeStamp 2017/01/18 23:00:02 
    24. 

  24. # InVolFile  mri/norm.mgz 
    25. 

  25. # InVolFileTimeStamp  2017/10/07 18:20:58 
    26. 

  26. # InVolFrame 0 
    27. 

  27. # PVVolFile  mri/norm.mgz 
    28. 

  28. # PVVolFileTimeStamp  2017/10/07 18:20:58 
    29. 

  29. # ExcludeSegId 0 
    30. 

  30. # Only reporting non-empty segmentations
    31. 

  31. # VoxelVolume_mm3 1 
    32. 

  32. # TableCol  1 ColHeader Index 
    33. 

  33. # TableCol  1 FieldName Index 
    34. 

  34. # TableCol  1 Units     NA 
    35. 

  35. # TableCol  2 ColHeader SegId 
    36. 

  36. # TableCol  2 FieldName Segmentation Id
    37. 

  37. # TableCol  2 Units     NA
    38. 

  38. # TableCol  3 ColHeader NVoxels 
    39. 

  39. # TableCol  3 FieldName Number of Voxels
    40. 

  40. # TableCol  3 Units     unitless
    41. 

  41. # TableCol  4 ColHeader Volume_mm3
    42. 

  42. # TableCol  4 FieldName Volume
    43. 

  43. # TableCol  4 Units     mm^3
    44. 

  44. # TableCol  5 ColHeader StructName
    45. 

  45. # TableCol  5 FieldName Structure Name
    46. 

  46. # TableCol  5 Units     NA
    47. 

  47. # TableCol  6 ColHeader normMean 
    48. 

  48. # TableCol  6 FieldName Intensity normMean
    49. 

  49. # TableCol  6 Units     MR
    50. 

  50. # TableCol  7 ColHeader normStdDev
    51. 

  51. # TableCol  7 FieldName Itensity normStdDev
    52. 

  52. # TableCol  7 Units     MR
    53. 

  53. # TableCol  8 ColHeader normMin
    54. 

  54. # TableCol  8 FieldName Intensity normMin
    55. 

  55. # TableCol  8 Units     MR
    56. 

  56. # TableCol  9 ColHeader normMax
    57. 

  57. # TableCol  9 FieldName Intensity normMax
    58. 

  58. # TableCol  9 Units     MR
    59. 

  59. # TableCol 10 ColHeader normRange
    60. 

  60. # TableCol 10 FieldName Intensity normRange
    61. 

  61. # TableCol 10 Units     MR
    62. 

  62. # NRows 70 
    63. 

  63. # NTableCols 10 
    64. 

  64. # ColHeaders  Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange  
    65. 

  65.   1 3001      3576     3545.7  wm-lh-bankssts                   101.6208     6.6562    76.0000   123.0000    47.0000 
    66. 

  66.   2 3002      3946     3967.3  wm-lh-caudalanteriorcingulate    101.9108     7.5227    74.0000   120.0000    46.0000 
    67. 

  67.   3 3003      8187     8236.1  wm-lh-caudalmiddlefrontal        100.2868     7.8421    59.0000   120.0000    61.0000 
    68. 

  68.   4 3005      2574     2611.9  wm-lh-cuneus                      91.3248     7.7618    69.0000   109.0000    40.0000 
    69. 

  69.   5 3006       756      790.4  wm-lh-entorhinal                  83.3201     7.0978    61.0000   102.0000    41.0000 
    70. 

  70.   6 3007      7289     7217.5  wm-lh-fusiform                    90.5344     8.4919    64.0000   113.0000    49.0000 
    71. 

  71.   7 3008     11898    12184.1  wm-lh-inferiorparietal           100.1215     7.9851    69.0000   125.0000    56.0000 
    72. 

  72.   8 3009      8121     8323.2  wm-lh-inferiortemporal            93.1905     9.4936    65.0000   120.0000    55.0000 
    73. 

  73.   9 3010      3554     3561.1  wm-lh-isthmuscingulate            98.8011     8.2588    42.0000   113.0000    71.0000 
    74. 

  74.  10 3011     10624    11095.8  wm-lh-lateraloccipital            94.7966     8.0985    69.0000   118.0000    49.0000 
    75. 

  75.  11 3012      8307     8341.1  wm-lh-lateralorbitofrontal        97.7282     9.0752    64.0000   122.0000    58.0000 
    76. 

  76.  12 3013      6089     6118.2  wm-lh-lingual                     88.6214     8.8373    53.0000   114.0000    61.0000 
    77. 

  77.  13 3014      5296     5266.5  wm-lh-medialorbitofrontal         95.5814    11.4452    25.0000   118.0000    93.0000 
    78. 

  78.  14 3015      6938     7202.5  wm-lh-middletemporal              95.0700     9.4161    66.0000   121.0000    55.0000 
    79. 

  79.  15 3016      1672     1736.9  wm-lh-parahippocampal             87.4510     7.0999    68.0000   111.0000    43.0000 
    80. 

  80.  16 3017      4400     4445.4  wm-lh-paracentral                100.2516     6.8447    68.0000   114.0000    46.0000 
    81. 

  81.  17 3018      4647     4692.1  wm-lh-parsopercularis             99.3051     8.2085    70.0000   116.0000    46.0000 
    82. 

  82.  18 3019      1352     1334.5  wm-lh-parsorbitalis               93.5969     9.5186    68.0000   114.0000    46.0000 
    83. 

  83.  19 3020      4223     4267.6  wm-lh-parstriangularis            98.1518     8.0552    72.0000   117.0000    45.0000 
    84. 

  84.  20 3021      3899     3581.9  wm-lh-pericalcarine               89.3039     9.8542    15.0000   116.0000   101.0000 
    85. 

  85.  21 3022      7890     8019.0  wm-lh-postcentral                100.5701     8.2889    76.0000   124.0000    48.0000 
    86. 

  86.  22 3023      5148     5058.7  wm-lh-posteriorcingulate          99.5165     8.1070    50.0000   114.0000    64.0000 
    87. 

  87.  23 3024     12814    13037.5  wm-lh-precentral                 101.3182     7.4396    62.0000   122.0000    60.0000 
    88. 

  88.  24 3025     11276    11178.1  wm-lh-precuneus                   98.7155     8.3853    46.0000   116.0000    70.0000 
    89. 

  89.  25 3026      2578     2453.6  wm-lh-rostralanteriorcingulate    93.6664    12.5712    41.0000   124.0000    83.0000 
    90. 

  90.  26 3027     15491    15736.4  wm-lh-rostralmiddlefrontal        98.9328     8.3226    68.0000   123.0000    55.0000 
    91. 

  91.  27 3028     22333    22449.4  wm-lh-superiorfrontal             96.8919     8.3996    59.0000   118.0000    59.0000 
    92. 

  92.  28 3029     12435    12719.3  wm-lh-superiorparietal            98.7756     8.3183    69.0000   122.0000    53.0000 
    93. 

  93.  29 3030      9358     9640.4  wm-lh-superiortemporal            94.6591     9.1646    68.0000   126.0000    58.0000 
    94. 

  94.  30 3031     10239    10373.1  wm-lh-supramarginal              102.7899     8.7330    66.0000   130.0000    64.0000 
    95. 

  95.  31 3032       304      319.0  wm-lh-frontalpole                 94.1217     8.2994    76.0000   116.0000    40.0000 
    96. 

  96.  32 3033       696      709.2  wm-lh-temporalpole                79.8319     6.0662    64.0000    99.0000    35.0000 
    97. 

  97.  33 3034       847      813.3  wm-lh-transversetemporal          94.3589     7.8983    75.0000   112.0000    37.0000 
    98. 

  98.  34 3035     10963    10796.8  wm-lh-insula                      92.0282    11.0005    26.0000   117.0000    91.0000 
    99. 

  99.  35 4001      4025     3951.4  wm-rh-bankssts                    98.4251     7.0260    76.0000   118.0000    42.0000 
    100. 

  100.  36 4002      2738     2799.6  wm-rh-caudalanteriorcingulate    102.8722     7.6138    67.0000   120.0000    53.0000 
    101. 

  101.  37 4003      7206     7251.0  wm-rh-caudalmiddlefrontal         98.1481     7.8309    72.0000   115.0000    43.0000 
    102. 

  102.  38 4005      2655     2668.6  wm-rh-cuneus                      89.0550     7.7318    69.0000   107.0000    38.0000 
    103. 

  103.  39 4006       656      697.7  wm-rh-entorhinal                  79.6631     7.8648    56.0000    98.0000    42.0000 
    104. 

  104.  40 4007      7331     7388.4  wm-rh-fusiform                    89.9304     8.3264    62.0000   110.0000    48.0000 
    105. 

  105.  41 4008     15973    16335.0  wm-rh-inferiorparietal            97.4553     8.1077    65.0000   121.0000    56.0000 
    106. 

  106.  42 4009      6933     7064.2  wm-rh-inferiortemporal            90.9296     8.9872    66.0000   109.0000    43.0000 
    107. 

  107.  43 4010      3697     3702.5  wm-rh-isthmuscingulate            97.6443     7.9272    60.0000   113.0000    53.0000 
    108. 

  108.  44 4011      9236     9532.1  wm-rh-lateraloccipital            90.8883     7.7131    67.0000   113.0000    46.0000 
    109. 

  109.  45 4012      8492     8414.5  wm-rh-lateralorbitofrontal        95.4580    10.3578    59.0000   121.0000    62.0000 
    110. 

  110.  46 4013      7435     7429.7  wm-rh-lingual                     87.1112     9.2700    19.0000   111.0000    92.0000 
    111. 

  111.  47 4014      4300     4324.3  wm-rh-medialorbitofrontal         95.1358    10.4199    64.0000   116.0000    52.0000 
    112. 

  112.  48 4015      7465     7733.5  wm-rh-middletemporal              92.5314     8.5642    67.0000   115.0000    48.0000 
    113. 

  113.  49 4016      1805     1859.6  wm-rh-parahippocampal             89.0072     6.8884    69.0000   107.0000    38.0000 
    114. 

  114.  50 4017      5541     5589.0  wm-rh-paracentral                 99.3907     6.6234    73.0000   114.0000    41.0000 
    115. 

  115.  51 4018      4288     4303.4  wm-rh-parsopercularis             97.2155     7.8793    73.0000   115.0000    42.0000 
    116. 

  116.  52 4019      1503     1522.7  wm-rh-parsorbitalis               92.8769     9.7634    69.0000   116.0000    47.0000 
    117. 

  117.  53 4020      4809     4848.6  wm-rh-parstriangularis            96.2233     8.3386    68.0000   116.0000    48.0000 
    118. 

  118.  54 4021      4517     4213.0  wm-rh-pericalcarine               87.7208     8.5772    53.0000   110.0000    57.0000 
    119. 

  119.  55 4022      8379     8509.1  wm-rh-postcentral                 97.6377     7.9566    67.0000   118.0000    51.0000 
    120. 

  120.  56 4023      5647     5542.7  wm-rh-posteriorcingulate          98.4880     8.9499    39.0000   115.0000    76.0000 
    121. 

  121.  57 4024     13737    13878.5  wm-rh-precentral                  99.0909     7.0051    69.0000   118.0000    49.0000 
    122. 

  122.  58 4025     10080    10068.6  wm-rh-precuneus                   97.4914     7.9229    69.0000   115.0000    46.0000 
    123. 

  123.  59 4026      2351     2334.0  wm-rh-rostralanteriorcingulate   102.8605     8.6956    75.0000   119.0000    44.0000 
    124. 

  124.  60 4027     18443    18694.0  wm-rh-rostralmiddlefrontal       100.3692     8.2652    72.0000   125.0000    53.0000 
    125. 

  125.  61 4028     21115    21252.1  wm-rh-superiorfrontal             97.7879     8.6907    51.0000   125.0000    74.0000 
    126. 

  126.  62 4029     12673    12899.4  wm-rh-superiorparietal            96.8906     8.0678    68.0000   117.0000    49.0000 
    127. 

  127.  63 4030      7144     7503.8  wm-rh-superiortemporal            93.2609     8.9568    66.0000   119.0000    53.0000 
    128. 

  128.  64 4031      9634     9755.3  wm-rh-supramarginal              101.9791     7.8614    73.0000   123.0000    50.0000 
    129. 

  129.  65 4032       339      341.3  wm-rh-frontalpole                 97.3923    10.1128    76.0000   122.0000    46.0000 
    130. 

  130.  66 4033       647      654.5  wm-rh-temporalpole                81.0185     6.7946    64.0000   101.0000    37.0000 
    131. 

  131.  67 4034       872      848.2  wm-rh-transversetemporal          94.8417     6.6531    77.0000   109.0000    32.0000 
    132. 

  132.  68 4035     11676    11575.1  wm-rh-insula                      90.4220    10.6923    14.0000   114.0000   100.0000 
    133. 

  133.  69 5001     29381    29136.3  Left-UnsegmentedWhiteMatter       98.3602    10.3811    32.0000   118.0000    86.0000 
    134. 

  134.  70 5002     28370    28300.5  Right-UnsegmentedWhiteMatter      98.5421     9.5863    17.0000   118.0000   101.0000 
    135.