crash-20200225-183121-ntraut-PlotMosaicNoise.a30-eb5cb7cb-9be6-4e76-9d24-727f62730074.txt 1.6 KB

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  1. Node: workflow_enumerator.anatMRIQCT1w.ReportsWorkflow.PlotMosaicNoise
  2. Working directory: /pasteur/projets/policy01/cinq/rto/data/abide2all/src/work/workflow_enumerator/anatMRIQCT1w/ReportsWorkflow/_in_file_..pasteur..projets..policy01..cinq..rto..data..abide2all..data..RawData..ABIDEII-OHSU_1..sub-28956..ses-1..anat..sub-28956_ses-1_run-1_T1w.nii.gz/PlotMosaicNoise
  3. Node inputs:
  4. annotate = True
  5. bbox_mask_file = <undefined>
  6. cmap = viridis_r
  7. dpi = 300
  8. figsize = (11.69, 8.27)
  9. in_file = <undefined>
  10. only_noise = True
  11. out_file = plot_anat_mosaic2_noise.svg
  12. title = <undefined>
  13. Traceback (most recent call last):
  14. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/linear.py", line 48, in run
  15. node.run(updatehash=updatehash)
  16. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 472, in run
  17. result = self._run_interface(execute=True)
  18. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 563, in _run_interface
  19. return self._run_command(execute)
  20. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 643, in _run_command
  21. result = self._interface.run(cwd=outdir)
  22. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 333, in run
  23. self._check_mandatory_inputs()
  24. File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 242, in _check_mandatory_inputs
  25. raise ValueError(msg)
  26. ValueError: PlotMosaic requires a value for input 'in_file'. For a list of required inputs, see PlotMosaic.help()