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- Node: workflow_enumerator.anatMRIQCT1w.AFNISkullStripWorkflow.inu_n4
- Working directory: /pasteur/projets/policy01/cinq/rto/data/abide2all/src/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..pasteur..projets..policy01..cinq..rto..data..abide2all..data..RawData..ABIDEII-OHSU_1..sub-28996..ses-1..anat..sub-28996_ses-1_run-1_T1w.nii.gz/inu_n4
- Node inputs:
- args = <undefined>
- bias_image = <undefined>
- bspline_fitting_distance = <undefined>
- bspline_order = <undefined>
- convergence_threshold = <undefined>
- copy_header = True
- dimension = 3
- environ = {'NSLOTS': '1'}
- input_image = <undefined>
- mask_image = <undefined>
- n_iterations = <undefined>
- num_threads = 1
- output_image = <undefined>
- save_bias = True
- shrink_factor = <undefined>
- weight_image = <undefined>
- Traceback (most recent call last):
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/linear.py", line 48, in run
- node.run(updatehash=updatehash)
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 472, in run
- result = self._run_interface(execute=True)
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 563, in _run_interface
- return self._run_command(execute)
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 631, in _run_command
- cmd = self._interface.cmdline
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 673, in cmdline
- self._check_mandatory_inputs()
- File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 242, in _check_mandatory_inputs
- raise ValueError(msg)
- ValueError: N4BiasFieldCorrection requires a value for input 'input_image'. For a list of required inputs, see N4BiasFieldCorrection.help()
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