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- Sat Jul 25 00:14:25 PDT 2020
- FREESURFER_HOME /opt/freesurfer
- Actual FREESURFER_HOME /opt/freesurfer
- /oak/stanford/groups/russpold/data/openneuro.org/derivatives/ds000114/freesurfer-6.0.1/sub-07
- setenv SUBJECTS_DIR /oak/stanford/groups/russpold/data/openneuro.org/derivatives/ds000114/freesurfer-6.0.1
- -autorecon-hemi lh -noparcstats -noparcstats2 -noparcstats3 -nohyporelabel -nobalabels -openmp 8 -subjid sub-07 -sd /oak/stanford/groups/russpold/data/openneuro.org/derivatives/ds000114/freesurfer-6.0.1 -notessellate -nosmooth1 -noinflate1 -noqsphere -nofix -nowhite -nosmooth2 -noinflate2 -nocurvstats -nosphere -nosurfreg -nojacobian_white -noavgcurv -nocortparc -nopial -nocortparc2 -nocortparc3 -nopctsurfcon
- Linux sh02-02n04.int 3.10.0-957.27.2.el7.x86_64 #1 SMP Mon Jul 29 17:46:05 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux
- cputime unlimited
- filesize unlimited
- datasize unlimited
- stacksize 8192 kbytes
- coredumpsize 0 kbytes
- memoryuse 4194304 kbytes
- vmemoryuse unlimited
- descriptors 131072
- memorylocked unlimited
- maxproc 4096
- maxlocks unlimited
- maxsignal 1030588
- maxmessage 819200
- maxnice 0
- maxrtprio 0
- maxrttime unlimited
- TEMPLATEFLOW_HOME=/home/users/oesteban/.cache/templateflow
- POSSUMDIR=/usr/share/fsl/5.0
- AFNI_TTATLAS_DATASET=/usr/share/afni/atlases
- AFNI_PLUGINPATH=/usr/lib/afni/plugins
- MKL_THREADING_LAYER=INTEL
- LD_LIBRARY_PATH=/usr/lib/fsl/5.0::/.singularity.d/libs
- HOME=/home/users/oesteban
- OLDPWD=/home/users/oesteban/fmriprep/ds000114
- PS1=Singularity>
- MINC_LIB_DIR=/opt/freesurfer/mni/lib
- FS_LICENSE=/home/users/oesteban/.freesurfer.txt
- FREESURFER_HOME=/opt/freesurfer
- MINC_BIN_DIR=/opt/freesurfer/mni/bin
- FSLDIR=/usr/share/fsl/5.0
- AFNI_IMSAVE_WARNINGS=NO
- PYTHONNOUSERSITE=1
- ANTSPATH=/usr/lib/ants
- FUNCTIONALS_DIR=/opt/freesurfer/sessions
- FSLMULTIFILEQUIT=TRUE
- FSLTCLSH=/usr/bin/tclsh
- NO_ET=1
- ANTS_RANDOM_SEED=22504
- TERM=xterm-256color
- PATH=/usr/local/miniconda/bin:/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
- OS=Linux
- PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5
- MNI_DIR=/opt/freesurfer/mni
- FSLOUTPUTTYPE=NIFTI_GZ
- KMP_INIT_AT_FORK=FALSE
- LANG=C
- MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5
- AFNI_MODELPATH=/usr/lib/afni/models
- LOCAL_DIR=/opt/freesurfer/local
- AROMA_VERSION=0.4.5
- FS_OVERRIDE=0
- FSLWISH=/usr/bin/wish
- IS_DOCKER_8395080871=1
- SINGULARITY_APPNAME=
- PROMPT_COMMAND=PS1="Singularity> "; unset PROMPT_COMMAND
- FSL_DIR=/usr/share/fsl/5.0
- FSF_OUTPUT_FORMAT=nii.gz
- SINGULARITY_CONTAINER=/home/groups/russpold/singularity_images/poldracklab_fmriprep_compcor-revision-2130-2020-07-23-0a9cb9ff47f9.simg
- MNI_DATAPATH=/opt/freesurfer/mni/data
- PWD=/oak/stanford/groups/russpold/data/openneuro.org/derivatives/ds000114/freesurfer-6.0.1/sub-07
- LC_ALL=C.UTF-8
- NIPYPE_NO_ET=1
- SUBJECTS_DIR=/oak/stanford/groups/russpold/data/openneuro.org/derivatives/ds000114/freesurfer-6.0.1
- MKL_NUM_THREADS=1
- OMP_NUM_THREADS=8
- SINGULARITY_NAME=poldracklab_fmriprep_compcor-revision-2130-2020-07-23-0a9cb9ff47f9.simg
- CPATH=/usr/local/miniconda/include/:
- FIX_VERTEX_AREA=
- HOSTTYPE=x86_64-linux
- VENDOR=unknown
- OSTYPE=linux
- MACHTYPE=x86_64
- SHLVL=1
- LOGNAME=oesteban
- USER=oesteban
- GROUP=russpold
- HOST=sh02-02n04.int
- ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=1
- FS_OMP_NUM_THREADS=8
- REQUIRE_FS_MATCH=0
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