plot ranges

analyses/fit_trends.py

@@ -124,25 +124,43 @@ significant_inc = fits[fits["99_significant"]==True].tail(3)
 
 fig, axes = plt.subplots(1,2,sharey=True)
 
+colors = ['#377eb8', '#ff7f00', '#4daf4a', '#f781bf', '#a65628', '#984ea3']
+
 ax = axes[0]
+n = 0
 for topic in significant_dec.to_dict(orient="records"):
     ax.plot(
         years,
         cumprobs[:,topic['topic']]/counts,
-        label=topic['description']
+        color = colors[n]
+    )
+    ax.scatter(
+        years,
+        cumprobs[:,topic['topic']]/counts,
+        label=topic['description'],
+        color = colors[n]
     )
+    n +=1
 
 ax.set_ylabel("Average relative contribution of each topic per year ($\\bar{\\theta_z}$)")
 ax.set_xlim(years.min(), years.max())
 ax.legend(fontsize='x-small', loc="upper right")
 
 ax = axes[1]
+n = 0
 for topic in significant_inc.to_dict(orient="records"):
     ax.plot(
         years,
         cumprobs[:,topic['topic']]/counts,
-        label=topic['description']
+        color = colors[n]
+    )
+    ax.scatter(
+        years,
+        cumprobs[:,topic['topic']]/counts,
+        label=topic['description'],
+        color = colors[n]
     )
+    n +=1
 
 ax.set_xlim(years.min(), years.max())
 ax.legend(fontsize='x-small', loc="upper right")

plots/hot_cold_topics_hep_2011_2019_susy.pdf

@@ -1 +1 @@
-../.git/annex/objects/qz/qx/MD5E-s18422--b882d2998d88514c148e6cbd5cf7816a.pdf/MD5E-s18422--b882d2998d88514c148e6cbd5cf7816a.pdf
+../.git/annex/objects/GK/M2/MD5E-s19029--63915fea3e49ffa3dc0c97df55b0c757.pdf/MD5E-s19029--63915fea3e49ffa3dc0c97df55b0c757.pdf

plots/hot_cold_topics_hep_2011_2019_susy.pgf

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plots/trades.pdf

@@ -0,0 +1 @@
+../.git/annex/objects/zK/08/MD5E-s9168--496b9dad257e4d35b6ce686a35f20657.pdf/MD5E-s9168--496b9dad257e4d35b6ce686a35f20657.pdf

plots/trades.pgf

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@@ -785,25 +735,25 @@
 \definecolor{currentstroke}{rgb}{1.000000,0.498039,0.000000}%
 \pgfsetstrokecolor{currentstroke}%
 \pgfsetdash{}{0pt}%
-\pgfpathmoveto{\pgfqpoint{0.886581in}{1.805742in}}%
-\pgfpathlineto{\pgfqpoint{1.134581in}{1.668405in}}%
-\pgfpathlineto{\pgfqpoint{1.382581in}{1.652014in}}%
-\pgfpathlineto{\pgfqpoint{1.630581in}{1.803682in}}%
-\pgfpathlineto{\pgfqpoint{1.878581in}{1.701688in}}%
-\pgfpathlineto{\pgfqpoint{2.126581in}{1.986291in}}%
-\pgfpathlineto{\pgfqpoint{2.374581in}{2.005743in}}%
-\pgfpathlineto{\pgfqpoint{2.622581in}{1.930154in}}%
-\pgfpathlineto{\pgfqpoint{2.870581in}{1.779698in}}%
+\pgfpathmoveto{\pgfqpoint{0.638581in}{1.805742in}}%
+\pgfpathlineto{\pgfqpoint{0.914137in}{1.668405in}}%
+\pgfpathlineto{\pgfqpoint{1.189692in}{1.652014in}}%
+\pgfpathlineto{\pgfqpoint{1.465248in}{1.803682in}}%
+\pgfpathlineto{\pgfqpoint{1.740803in}{1.701688in}}%
+\pgfpathlineto{\pgfqpoint{2.016359in}{1.986291in}}%
+\pgfpathlineto{\pgfqpoint{2.291914in}{2.005743in}}%
+\pgfpathlineto{\pgfqpoint{2.567470in}{1.930154in}}%
+\pgfpathlineto{\pgfqpoint{2.843025in}{1.779698in}}%
 \pgfpathlineto{\pgfqpoint{3.118581in}{1.725042in}}%
-\pgfpathlineto{\pgfqpoint{3.366581in}{1.600583in}}%
-\pgfpathlineto{\pgfqpoint{3.614581in}{1.600006in}}%
-\pgfpathlineto{\pgfqpoint{3.862581in}{1.620542in}}%
-\pgfpathlineto{\pgfqpoint{4.110581in}{1.658750in}}%
-\pgfpathlineto{\pgfqpoint{4.358581in}{1.611355in}}%
-\pgfpathlineto{\pgfqpoint{4.606581in}{1.473570in}}%
-\pgfpathlineto{\pgfqpoint{4.854581in}{1.523976in}}%
-\pgfpathlineto{\pgfqpoint{5.102581in}{1.582249in}}%
-\pgfpathlineto{\pgfqpoint{5.350581in}{1.631581in}}%
+\pgfpathlineto{\pgfqpoint{3.394137in}{1.600583in}}%
+\pgfpathlineto{\pgfqpoint{3.669692in}{1.600006in}}%
+\pgfpathlineto{\pgfqpoint{3.945248in}{1.620542in}}%
+\pgfpathlineto{\pgfqpoint{4.220803in}{1.658750in}}%
+\pgfpathlineto{\pgfqpoint{4.496359in}{1.611355in}}%
+\pgfpathlineto{\pgfqpoint{4.771914in}{1.473570in}}%
+\pgfpathlineto{\pgfqpoint{5.047470in}{1.523976in}}%
+\pgfpathlineto{\pgfqpoint{5.323025in}{1.582249in}}%
+\pgfpathlineto{\pgfqpoint{5.598581in}{1.631581in}}%
 \pgfusepath{stroke}%
 \end{pgfscope}%
 \begin{pgfscope}%

plots/trades.py

@@ -68,8 +68,8 @@ ax.plot(years, p_t_ph_th, color=colors[1], lw=0.5)
 
 ax.set_ylabel("$P($trade$)$")
 
-ax.set_xticks(np.arange(2000,2020+2,2))
-ax.set_xlim(2000,2020)
+ax.set_xticks(np.arange(2000,2020,2))
+ax.set_xlim(2001,2019)
 ax.set_ylim(0,0.15)
 ax.legend()
 

plots/trading_zone.py

@@ -99,10 +99,9 @@ for i, ngram in ngrams[ngrams["ngram"].str.contains("super")].tail(5).to_dict(or
     n += 1
 
 for i in range(2):
-    axes[i].set_xlim(2001,2020)
+    axes[i].set_xlim(2001,2019)
     axes[i].set_ylim(0.003,0.3)
     axes[i].set_yscale("log")
-    axes[i].plot([2000,2020.5], [1, 1], ls="-", color="black")
     axes[i].legend(loc=("best" if i < 2 else "lower right"), prop={'size': 6})
 
 plt.savefig(f"plots/trading_zone_{boundary}.pdf", bbox_inches="tight")

plots/trading_zone_0_1.pdf

@@ -1 +1 @@
-../.git/annex/objects/7z/6q/MD5E-s18614--d67af858bc3404ff79d0628deb27cc40.pdf/MD5E-s18614--d67af858bc3404ff79d0628deb27cc40.pdf
+../.git/annex/objects/0P/Xp/MD5E-s18546--da4cfccddcd304c14c8b11c6dff2186e.pdf/MD5E-s18546--da4cfccddcd304c14c8b11c6dff2186e.pdf

plots/trading_zone_1_0.pdf

@@ -1 +1 @@
-../.git/annex/objects/M1/V9/MD5E-s18490--950583ad8bf4217a5672cabc7ec2a0da.pdf/MD5E-s18490--950583ad8bf4217a5672cabc7ec2a0da.pdf
+../.git/annex/objects/z1/VX/MD5E-s18396--4d36c7e6baaab626ae3f01ebbfc6e2b0.pdf/MD5E-s18396--4d36c7e6baaab626ae3f01ebbfc6e2b0.pdf