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release_notes.rst

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  1. *************
    2. 

  2. Release Notes
    3. 

  3. *************
    4. 

  4. 

  5. Elephant 0.4.1 release notes
    6. 

  6. ============================
    7. 

  7. March 23rd 2017
    8. 

  8. 

  9. Other changes
    10. 

  10. =============
    11. 

  11. * Fix in `setup.py` to correctly import the current source density module
    12. 

  12. 

  13. Elephant 0.4.0 release notes
    14. 

  14. ============================
    15. 

  15. March 22nd 2017
    16. 

  16. 

  17. New functions
    18. 

  18. =============
    19. 

  19. * `spike_train_generation` module:
    20. 

  20.     * peak detection: **peak_detection()**
    21. 

  21. * Modules for Current Source Density: `current_source_density_src`
    22. 

  22.     * Module Current Source Density: `KCSD.py`
    23. 

  23.     * Module for Inverse Current Source Density: `icsd.py`
    24. 

  24. 

  25. API changes
    26. 

  26. ===========
    27. 

  27. * Interoperability between Neo 0.5.0 and Elephant
    28. 

  28.     * Elephant has adapted its functions to the changes in Neo 0.5.0,
    29. 

  29.       most of the functionality behaves as before
    30. 

  30.     * See Neo documentation for recent changes: http://neo.readthedocs.io/en/latest/whatisnew.html
    31. 

  31. 

  32. Other changes
    33. 

  33. =============
    34. 

  34. * Fixes to travis and setup configuration files.
    35. 

  35. * Minor bug fixes.
    36. 

  36. * Added module `six` for Python 2.7 backwards compatibility
    37. 

  37. 

  38. 

  39. Elephant 0.3.0 release notes
    40. 

  40. ============================
    41. 

  41. April 12st 2016
    42. 

  42. 

  43. New functions
    44. 

  44. =============
    45. 

  45. * `spike_train_correlation` module:
    46. 

  46.     * cross correlation histogram: **cross_correlation_histogram()**
    47. 

  47. * `spike_train_generation` module:
    48. 

  48.     * single interaction process (SIP): **single_interaction_process()**
    49. 

  49.     * compound Poisson process (CPP): **compound_poisson_process()**
    50. 

  50. * `signal_processing` module:
    51. 

  51.     * analytic signal: **hilbert()**
    52. 

  52. * `sta` module:
    53. 

  53.     * spike field coherence: **spike_field_coherence()**
    54. 

  54. * Module to represent kernels: `kernels` module
    55. 

  55. * Spike train metrics / dissimilarity / synchrony measures: `spike_train_dissimilarity` module
    56. 

  56. * Unitary Event (UE) analysis: `unitary_event_analysis` module
    57. 

  57. * Analysis of Sequences of Synchronous EvenTs (ASSET): `asset` module
    58. 

  58. 

  59. API changes
    60. 

  60. ===========
    61. 

  61. * Function **instantaneous_rate()** now uses kernels as objects defined in the `kernels` module. The previous implementation of the function using the `make_kernel()` function is deprecated, but still temporarily available as `oldfct_instantaneous_rate()`.
    62. 

  62. 

  63. Other changes
    64. 

  64. =============
    65. 

  65. * Fixes to travis and readthedocs configuration files.
    66. 

  66. 

  67. 

  68. Elephant 0.2.1 release notes
    69. 

  69. ============================
    70. 

  70. February 18th 2016
    71. 

  71. 

  72. Minor bug fixes.
    73. 

  73. 

  74. 

  75. Elephant 0.2.0 release notes
    76. 

  76. ============================
    77. 

  77. September 22nd 2015
    78. 

  78. 

  79. New functions
    80. 

  80. =============
    81. 

  81. 

  82. * Added covariance function **covariance()** in the `spike_train_correlation` module
    83. 

  83. * Added complexity pdf **complexity_pdf()** in the `statistics` module
    84. 

  84. * Added spike train extraction from analog signals via threshold detection the in `spike_train_generation` module
    85. 

  85. * Added **coherence()** function for analog signals in the `spectral` module
    86. 

  86. * Added **Cumulant Based Inference for higher-order of Correlation (CuBIC)** in the `cubic` module for correlation analysis of parallel recorded spike trains
    87. 

  87. 

  88. API changes
    89. 

  89. ===========
    90. 

  90. * **Optimized kernel bandwidth** in `rate_estimation` function: Calculates the optimized kernel width when the paramter kernel width is specified as `auto`
    91. 

  91. 

  92. Other changes
    93. 

  93. =============
    94. 

  94. * **Optimized creation of sparse matrices**: The creation speed of the sparse matrix inside the `BinnedSpikeTrain` class is optimized
    95. 

  95. * Added **Izhikevich neuron simulator** in the `make_spike_extraction_test_data` module
    96. 

  96. * Minor improvements to the test and continous integration infrastructure
    97.