install.data.html 5.8 KB

123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149
  1. <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
  2. "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
  3. <html xmlns="http://www.w3.org/1999/xhtml">
  4. <head>
  5. <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  6. <title>4. Installing AFNI_data6 (sample class data) &mdash; unix tutorial 0.1 documentation</title>
  7. <link rel="stylesheet" href="../_static/default.css" type="text/css" />
  8. <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
  9. <script type="text/javascript">
  10. var DOCUMENTATION_OPTIONS = {
  11. URL_ROOT: '../',
  12. VERSION: '0.1',
  13. COLLAPSE_INDEX: false,
  14. FILE_SUFFIX: '.html',
  15. HAS_SOURCE: true
  16. };
  17. </script>
  18. <script type="text/javascript" src="../_static/jquery.js"></script>
  19. <script type="text/javascript" src="../_static/underscore.js"></script>
  20. <script type="text/javascript" src="../_static/doctools.js"></script>
  21. <link rel="top" title="unix tutorial 0.1 documentation" href="../index.html" />
  22. <link rel="next" title="1. Basic Unix : setup" href="../basic/basic_00.install.html" />
  23. <link rel="prev" title="3. Installing AFNI (software)" href="install.afni.html" />
  24. </head>
  25. <body>
  26. <div class="related">
  27. <h3>Navigation</h3>
  28. <ul>
  29. <li class="right" style="margin-right: 10px">
  30. <a href="../genindex.html" title="General Index"
  31. accesskey="I">index</a></li>
  32. <li class="right" >
  33. <a href="../basic/basic_00.install.html" title="1. Basic Unix : setup"
  34. accesskey="N">next</a> |</li>
  35. <li class="right" >
  36. <a href="install.afni.html" title="3. Installing AFNI (software)"
  37. accesskey="P">previous</a> |</li>
  38. <li><a href="../index.html">unix tutorial 0.1 documentation</a> &raquo;</li>
  39. </ul>
  40. </div>
  41. <div class="document">
  42. <div class="documentwrapper">
  43. <div class="bodywrapper">
  44. <div class="body">
  45. <div class="section" id="installing-afni-data6-sample-class-data">
  46. <span id="u-misc-installing-data"></span><h1>4. Installing AFNI_data6 (sample class data)<a class="headerlink" href="#installing-afni-data6-sample-class-data" title="Permalink to this headline">¶</a></h1>
  47. <p>In a typical AFNI bootcamp, the AFNI_data6 directory will be put under the $HOME directory.</p>
  48. <p>The following commands will download it and place it in the $HOME directory:</p>
  49. <div class="highlight-python"><pre>cd
  50. curl -O http://afni.nimh.nih.gov/pub/dist/edu/data/AFNI_data6.tgz
  51. tar xfz AFNI_data6.tgz</pre>
  52. </div>
  53. <p>The output might look like:</p>
  54. <div class="figure">
  55. <img alt="../_images/basic_0C_ID.jpg" src="../_images/basic_0C_ID.jpg" />
  56. </div>
  57. <p>Data installation is part of setting up a computer for an AFNI bootcamp. For full details, see: <a class="reference external" href="http://afni.nimh.nih.gov/pub/dist/HOWTO/howto/ht00_inst/html/class_setup.html">howto: class setup</a></p>
  58. <div class="section" id="a-simple-test">
  59. <h2>4.1. A simple test<a class="headerlink" href="#a-simple-test" title="Permalink to this headline">¶</a></h2>
  60. <p>Make sure that AFNI_data6 is installed via the &#8216;ls&#8217; command:</p>
  61. <div class="highlight-python"><pre>ls AFNI_data6</pre>
  62. </div>
  63. <p>The result should show the contents of that directory, such as:</p>
  64. <blockquote>
  65. <div><ul class="simple">
  66. <li>the afni directory</li>
  67. <li>the FT_analysis directory</li>
  68. <li>the unix_tutorial directory (which contains this tutorial)</li>
  69. <li>history.txt</li>
  70. </ul>
  71. </div></blockquote>
  72. <div class="figure">
  73. <img alt="../_images/misc_ID_0_ls.jpg" src="../_images/misc_ID_0_ls.jpg" />
  74. </div>
  75. </div>
  76. </div>
  77. </div>
  78. </div>
  79. </div>
  80. <div class="sphinxsidebar">
  81. <div class="sphinxsidebarwrapper">
  82. <h3><a href="../index.html">Table Of Contents</a></h3>
  83. <ul>
  84. <li><a class="reference internal" href="#">4. Installing AFNI_data6 (sample class data)</a><ul>
  85. <li><a class="reference internal" href="#a-simple-test">4.1. A simple test</a></li>
  86. </ul>
  87. </li>
  88. </ul>
  89. <h4>Previous topic</h4>
  90. <p class="topless"><a href="install.afni.html"
  91. title="previous chapter">3. Installing AFNI (software)</a></p>
  92. <h4>Next topic</h4>
  93. <p class="topless"><a href="../basic/basic_00.install.html"
  94. title="next chapter">1. Basic Unix : setup</a></p>
  95. <h3>This Page</h3>
  96. <ul class="this-page-menu">
  97. <li><a href="../_sources/misc/install.data.txt"
  98. rel="nofollow">Show Source</a></li>
  99. </ul>
  100. <div id="searchbox" style="display: none">
  101. <h3>Quick search</h3>
  102. <form class="search" action="../search.html" method="get">
  103. <input type="text" name="q" />
  104. <input type="submit" value="Go" />
  105. <input type="hidden" name="check_keywords" value="yes" />
  106. <input type="hidden" name="area" value="default" />
  107. </form>
  108. <p class="searchtip" style="font-size: 90%">
  109. Enter search terms or a module, class or function name.
  110. </p>
  111. </div>
  112. <script type="text/javascript">$('#searchbox').show(0);</script>
  113. </div>
  114. </div>
  115. <div class="clearer"></div>
  116. </div>
  117. <div class="related">
  118. <h3>Navigation</h3>
  119. <ul>
  120. <li class="right" style="margin-right: 10px">
  121. <a href="../genindex.html" title="General Index"
  122. >index</a></li>
  123. <li class="right" >
  124. <a href="../basic/basic_00.install.html" title="1. Basic Unix : setup"
  125. >next</a> |</li>
  126. <li class="right" >
  127. <a href="install.afni.html" title="3. Installing AFNI (software)"
  128. >previous</a> |</li>
  129. <li><a href="../index.html">unix tutorial 0.1 documentation</a> &raquo;</li>
  130. </ul>
  131. </div>
  132. <div class="footer">
  133. &copy; Copyright 2015, rick reynolds.
  134. Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
  135. </div>
  136. </body>
  137. </html>