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3.MEMA_2grps.txt

3.MEMA_2grps.txt 2.3 KB
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  1. # 3 genetypic groups: Val/Val (12), Val/Met (10), Met/Met (9)
    2. 

  2. # Unequal number of subjects across groups
    3. 

  3. # 1 effect estimate per subject
    4. 

  4. # By default xxi3dMEMA++ can only compare two groups
    5. 

  5. # Group comparison: B-A
    6. 

  6. 

  7. 3dMEMA -prefix output.MEMA_2grps -jobs 2             \
    8. 

  8. -groups VV VM -missing_data 0                        \
    9. 

  9. -covariates cov_2grps.1D -covariates_center FD = 0 0 \
    10. 

  10. -covariates_model center=same slope=different        \
    11. 

  11. -HKtest -model_outliers -residual_Z                  \
    12. 

  12. -set VV \
    13. 

  13. as   data/as+tlrc'[HO_resvnr_mvn#0_Coef]'    data/as+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    14. 

  14. cg   data/cg+tlrc'[HO_resvnr_mvn#0_Coef]'    data/cg+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    15. 

  15. cm   data/cm+tlrc'[HO_resvnr_mvn#0_Coef]'    data/cm+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    16. 

  16. db   data/db+tlrc'[HO_resvnr_mvn#0_Coef]'    data/db+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    17. 

  17. dh   data/dh+tlrc'[HO_resvnr_mvn#0_Coef]'    data/dh+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    18. 

  18. dt   data/dt+tlrc'[HO_resvnr_mvn#0_Coef]'    data/dt+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    19. 

  19. gm   data/gm+tlrc'[HO_resvnr_mvn#0_Coef]'    data/gm+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    20. 

  20. hb   data/hb+tlrc'[HO_resvnr_mvn#0_Coef]'    data/hb+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    21. 

  21. js   data/js+tlrc'[HO_resvnr_mvn#0_Coef]'    data/js+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    22. 

  22. kb   data/kb+tlrc'[HO_resvnr_mvn#0_Coef]'    data/kb+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    23. 

  23. mg   data/mg+tlrc'[HO_resvnr_mvn#0_Coef]'    data/mg+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    24. 

  24. ph   data/ph+tlrc'[HO_resvnr_mvn#0_Coef]'    data/ph+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    25. 

  25. -set VM \
    26. 

  26. pl   data/pl+tlrc'[HO_resvnr_mvn#0_Coef]'    data/pl+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    27. 

  27. ro   data/ro+tlrc'[HO_resvnr_mvn#0_Coef]'    data/ro+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    28. 

  28. te   data/te+tlrc'[HO_resvnr_mvn#0_Coef]'    data/te+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    29. 

  29. tf   data/tf+tlrc'[HO_resvnr_mvn#0_Coef]'    data/tf+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    30. 

  30. zy   data/zy+tlrc'[HO_resvnr_mvn#0_Coef]'    data/zy+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    31. 

  31. ee   data/ee+tlrc'[HO_resvnr_mvn#0_Coef]'    data/ee+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    32. 

  32. jl   data/jl+tlrc'[HO_resvnr_mvn#0_Coef]'    data/jl+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    33. 

  33. jp   data/jp+tlrc'[HO_resvnr_mvn#0_Coef]'    data/jp+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    34. 

  34. kc   data/kc+tlrc'[HO_resvnr_mvn#0_Coef]'    data/kc+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    35. 

  35. rb   data/rb+tlrc'[HO_resvnr_mvn#0_Coef]'    data/rb+tlrc'[HO_resvnr_mvn#0_Tstat]' \
    36. 

  36.