Whisker tracking data for: Bergmann, Sehara et al., 2022

Whisker-tracking data for the project "AirtrackMotorPlanning" (examines whether whiskers and pupil positions predict the animal's motor plans).

The dataset stored here is part of the root data repository, and it is:

based on the raw dataset.
an intermediate one; for the 'final' dataset used for the analysis, refer to the formatted dataset.

File organization

The files are organized as: <ANIMAL>/<SESSION>/<DOMAIN>/<ANIMAL>_<SESSION>_<DOMAIN>_run<TRIAL>, where:

ANIMAL representing the ID of the animal (in the pattern MLAxxxxxx).
SESSION being the name of the session (in the pattern sessionYYYY-MM-DD-001).
DOMAIN representing the domain of recording (see below).
TRIAL being the trial index during the session.

Domain name	Description
projection	PNG files containing a maximal projection of top-view video frames from each single trial.
ROI	PNG files representing the mask for ROIs generated from the maximal projection images. These ROIs were used for the subsequent tracking.
mask	MP4 files containing color masks generated by color-tracking procedure of videobatch.
result	CSV files containing the center-of-mass positions of tracked whiskers (in pixels), generated by videobatch.