add project

README.md

@@ -1,3 +1,25 @@
-# Keisuke_Sehara_EyeTrackingAlgorithm
+# Eye-tracking model
+
+The DeepLabCut project for eye tracking.
+
+## How to use
+
+Install DeepLabCut before use.
+
+I recommend using the following version:
+
+```bash
+$ git clone https://github.com/gwappa/DeepLabCut.git && cd DeepLabCut
+$ git checkout v2.1.8ks
+```
+
+1. Clone this repository.
+2. Modify the path in `eyes-Keisuke-2019-12-08/config.yaml`
+   to match the actual situation.
+
+Then the `deeplabcut` library can be used with `eyes-Keisuke-2019-12-08`.
+
+## License
+
+Copyright (c) 2019-2021 Keisuke Sehara, CC-BY 4.0
 
-The DeepLabCut project, along with the fitting algorithms, for eye tracking.

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eye_videos/addrate.py

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eyes-Keisuke-2019-12-08/.gitattributes

@@ -0,0 +1,15 @@
+* annex.largefiles=largerthan=100kb
+*.avi annex.largefiles=anything
+*.mp4 annex.largefiles=anything
+*.h5 annex.largefiles=anything
+*.csv annex.largefiles=largerthan=10kb
+*.png annex.largefiles=largerthan=100kb
+*.mat annex.largefiles=anything
+*.pickle annex.largefiles=anything
+*.yaml annex.largefiles=nothing
+*.txt annex.largefiles=nothing
+LICENSE annex.largefiles=nothing
+*.md annex.largefiles=nothing
+*.yml annex.largefiles=nothing
+*.json annex.largefiles=nothing
+

eyes-Keisuke-2019-12-08/config.yaml

@@ -0,0 +1,102 @@
+# Project definitions (do not edit)
+Task: eyes
+scorer: Keisuke
+date: Dec8
+
+# Project path (change when moving around)
+project_path: /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eyes-Keisuke-2019-12-08
+
+# Annotation data set configuration (and individual video cropping parameters)
+video_sets:
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA007518_20191006_3-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA007518_20191006_3-1.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005759_20190324_144801-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005759_20190324_144801-1.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005719_20190929_3-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005719_20190929_3-1.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005756_20190625_5-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005756_20190625_5-1.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA007296_20190929_5-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA007296_20190929_5-1.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005758_20190322_145446-0.avi:
+    crop: 0, 192, 0, 200
+  /media/mouse/Data2/AirTrack_PupilTrack/EyeTrackingModel/eye_videos/MLA005758_20190322_145446-1.avi:
+    crop: 0, 192, 0, 200
+bodyparts:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+start: 0
+stop: 1
+numframes2pick: 12
+
+# Plotting configuration
+skeleton:
+- - pupil_top
+  - pupil_topleft
+- - pupil_topleft
+  - pupil_left
+- - pupil_left
+  - pupil_bottomleft
+- - pupil_bottomleft
+  - pupil_bottom
+- - pupil_bottom
+  - pupil_bottomright
+- - pupil_bottomright
+  - pupil_right
+- - pupil_right
+  - pupil_topright
+- - pupil_topright
+  - pupil_top
+skeleton_color: yellow
+pcutoff: 0.1
+dotsize: 4
+alphavalue: 0.5
+colormap: gist_rainbow
+
+# Training,Evaluation and Analysis configuration
+TrainingFraction:
+- 0.95
+iteration: 6
+resnet:
+snapshotindex: -1
+batch_size: 8
+
+# Cropping Parameters (for analysis and outlier frame detection)
+cropping: false
+#if cropping is true for analysis, then set the values here:
+x1: 0
+x2: 640
+y1: 277
+y2: 624
+
+# Refinement configuration (parameters from annotation dataset configuration also relevant in this stage)
+corner2move2:
+- 50
+- 50
+move2corner: true
+default_net_type: resnet_50
+default_augmenter: default

eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/test/pose_cfg.yaml

@@ -0,0 +1,42 @@
+all_joints:
+- - 0
+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
+all_joints_names:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+dataset: training-datasets/iteration-0/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+location_refinement: true
+locref_stdev: 7.2801
+net_type: resnet_50
+num_joints: 16
+scoremap_dir: test

eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/checkpoint

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+model_checkpoint_path: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-1030000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-850000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-900000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-950000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-1000000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/snapshot-1030000"

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eyes-Keisuke-2019-12-08/dlc-models/iteration-0/eyesDec8-trainset95shuffle1/train/pose_cfg.yaml

@@ -0,0 +1,72 @@
+all_joints:
+- - 0
+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
+all_joints_names:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+bottomheight: 400
+crop: true
+cropratio: 0.4
+dataset: training-datasets/iteration-0/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+dataset_type: default
+display_iters: 1000
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+intermediate_supervision: false
+intermediate_supervision_layer: 12
+leftwidth: 400
+location_refinement: true
+locref_huber_loss: true
+locref_loss_weight: 0.05
+locref_stdev: 7.2801
+max_input_size: 1500
+metadataset: training-datasets/iteration-0/UnaugmentedDataSet_eyesDec8/Documentation_data-eyes_95shuffle1.pickle
+min_input_size: 64
+minsize: 100
+mirror: false
+multi_step:
+- - 0.005
+  - 10000
+- - 0.02
+  - 430000
+- - 0.002
+  - 730000
+- - 0.001
+  - 1030000
+net_type: resnet_50
+num_joints: 16
+pos_dist_thresh: 17
+project_path: /home/mouse/ks/Projects/eyes-Keisuke-2019-12-08
+rightwidth: 400
+save_iters: 50000
+scale_jitter_lo: 0.5
+scale_jitter_up: 1.25
+topheight: 400

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eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/test/pose_cfg.yaml

@@ -0,0 +1,42 @@
+all_joints:
+- - 0
+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
+all_joints_names:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+dataset: training-datasets/iteration-1/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+location_refinement: true
+locref_stdev: 7.2801
+net_type: resnet_50
+num_joints: 16
+scoremap_dir: test

eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/checkpoint

@@ -0,0 +1,6 @@
+model_checkpoint_path: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-1030000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-850000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-900000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-950000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-1000000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/snapshot-1030000"

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eyes-Keisuke-2019-12-08/dlc-models/iteration-1/eyesDec8-trainset95shuffle1/train/pose_cfg.yaml

@@ -0,0 +1,72 @@
+all_joints:
+- - 0
+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
+all_joints_names:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+bottomheight: 400
+crop: true
+cropratio: 0.4
+dataset: training-datasets/iteration-1/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+dataset_type: default
+display_iters: 1000
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+intermediate_supervision: false
+intermediate_supervision_layer: 12
+leftwidth: 400
+location_refinement: true
+locref_huber_loss: true
+locref_loss_weight: 0.05
+locref_stdev: 7.2801
+max_input_size: 1500
+metadataset: training-datasets/iteration-1/UnaugmentedDataSet_eyesDec8/Documentation_data-eyes_95shuffle1.pickle
+min_input_size: 64
+minsize: 100
+mirror: false
+multi_step:
+- - 0.005
+  - 10000
+- - 0.02
+  - 430000
+- - 0.002
+  - 730000
+- - 0.001
+  - 1030000
+net_type: resnet_50
+num_joints: 16
+pos_dist_thresh: 17
+project_path: /home/mouse/ks/Projects/eyes-Keisuke-2019-12-08
+rightwidth: 400
+save_iters: 50000
+scale_jitter_lo: 0.5
+scale_jitter_up: 1.25
+topheight: 400

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eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/test/pose_cfg.yaml

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+all_joints:
+- - 0
+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
+all_joints_names:
+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+dataset: training-datasets/iteration-2/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+location_refinement: true
+locref_stdev: 7.2801
+net_type: resnet_50
+num_joints: 16
+scoremap_dir: test

eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/checkpoint

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+model_checkpoint_path: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-1030000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-850000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-900000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-950000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-1000000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot-1030000"

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+2019-12-13 17:14:05 Config:
+{'all_joints': [[0],
+                [1],
+                [2],
+                [3],
+                [4],
+                [5],
+                [6],
+                [7],
+                [8],
+                [9],
+                [10],
+                [11],
+                [12],
+                [13],
+                [14],
+                [15]],
+ 'all_joints_names': ['eye_top',
+                      'eye_topleft',
+                      'eye_left',
+                      'eye_bottomleft',
+                      'eye_bottom',
+                      'eye_bottomright',
+                      'eye_right',
+                      'eye_topright',
+                      'pupil_top',
+                      'pupil_topleft',
+                      'pupil_left',
+                      'pupil_bottomleft',
+                      'pupil_bottom',
+                      'pupil_bottomright',
+                      'pupil_right',
+                      'pupil_topright'],
+ 'batch_size': 8,
+ 'bottomheight': 400,
+ 'crop': True,
+ 'crop_pad': 0,
+ 'cropratio': 0.4,
+ 'dataset': 'training-datasets/iteration-2/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat',
+ 'dataset_type': 'default',
+ 'deconvolutionstride': 2,
+ 'deterministic': False,
+ 'display_iters': 1000,
+ 'fg_fraction': 0.25,
+ 'global_scale': 0.8,
+ 'init_weights': '/home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt',
+ 'intermediate_supervision': False,
+ 'intermediate_supervision_layer': 12,
+ 'leftwidth': 400,
+ 'location_refinement': True,
+ 'locref_huber_loss': True,
+ 'locref_loss_weight': 0.05,
+ 'locref_stdev': 7.2801,
+ 'log_dir': 'log',
+ 'max_input_size': 1500,
+ 'mean_pixel': [123.68, 116.779, 103.939],
+ 'metadataset': 'training-datasets/iteration-2/UnaugmentedDataSet_eyesDec8/Documentation_data-eyes_95shuffle1.pickle',
+ 'min_input_size': 64,
+ 'minsize': 100,
+ 'mirror': False,
+ 'multi_step': [[0.005, 10000],
+                [0.02, 430000],
+                [0.002, 730000],
+                [0.001, 1030000]],
+ 'net_type': 'resnet_50',
+ 'num_joints': 16,
+ 'num_outputs': 1,
+ 'optimizer': 'sgd',
+ 'output_stride': 16,
+ 'pos_dist_thresh': 17,
+ 'project_path': '/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08',
+ 'regularize': False,
+ 'rightwidth': 400,
+ 'save_iters': 50000,
+ 'scale_jitter_lo': 0.5,
+ 'scale_jitter_up': 1.25,
+ 'scoremap_dir': 'test',
+ 'shuffle': True,
+ 'snapshot_prefix': '/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/snapshot',
+ 'stride': 8.0,
+ 'topheight': 400,
+ 'weigh_negatives': False,
+ 'weigh_only_present_joints': False,
+ 'weigh_part_predictions': False,
+ 'weight_decay': 0.0001}

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eyes-Keisuke-2019-12-08/dlc-models/iteration-2/eyesDec8-trainset95shuffle1/train/pose_cfg.yaml

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+- - 1
+- - 2
+- - 3
+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
+- - 14
+- - 15
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+- eye_top
+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+bottomheight: 400
+crop: true
+cropratio: 0.4
+dataset: training-datasets/iteration-2/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+dataset_type: default
+display_iters: 1000
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+intermediate_supervision: false
+intermediate_supervision_layer: 12
+leftwidth: 400
+location_refinement: true
+locref_huber_loss: true
+locref_loss_weight: 0.05
+locref_stdev: 7.2801
+max_input_size: 1500
+metadataset: training-datasets/iteration-2/UnaugmentedDataSet_eyesDec8/Documentation_data-eyes_95shuffle1.pickle
+min_input_size: 64
+minsize: 100
+mirror: false
+multi_step:
+- - 0.005
+  - 10000
+- - 0.02
+  - 430000
+- - 0.002
+  - 730000
+- - 0.001
+  - 1030000
+net_type: resnet_50
+num_joints: 16
+pos_dist_thresh: 17
+project_path: /home/mouse/ks/Projects/eyes-Keisuke-2019-12-08
+rightwidth: 400
+save_iters: 50000
+scale_jitter_lo: 0.5
+scale_jitter_up: 1.25
+topheight: 400

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eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/test/pose_cfg.yaml

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+- - 4
+- - 5
+- - 6
+- - 7
+- - 8
+- - 9
+- - 10
+- - 11
+- - 12
+- - 13
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+- eye_topleft
+- eye_left
+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+dataset: training-datasets/iteration-3/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+location_refinement: true
+locref_stdev: 7.2801
+net_type: resnet_50
+num_joints: 16
+scoremap_dir: test

eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/train/checkpoint

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+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/train/snapshot-850000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/train/snapshot-900000"
+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/train/snapshot-950000"
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+all_model_checkpoint_paths: "/home/mouse/ks/Projects/eyes-Keisuke-2019-12-08/dlc-models/iteration-3/eyesDec8-trainset95shuffle1/train/snapshot-1030000"

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+- - 5
+- - 6
+- - 7
+- - 8
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+- - 10
+- - 11
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+- - 13
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+- - 15
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+- eye_topleft
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+- eye_bottomleft
+- eye_bottom
+- eye_bottomright
+- eye_right
+- eye_topright
+- pupil_top
+- pupil_topleft
+- pupil_left
+- pupil_bottomleft
+- pupil_bottom
+- pupil_bottomright
+- pupil_right
+- pupil_topright
+bottomheight: 400
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+dataset: training-datasets/iteration-3/UnaugmentedDataSet_eyesDec8/eyes_Keisuke95shuffle1.mat
+dataset_type: default
+display_iters: 1000
+global_scale: 0.8
+init_weights: /home/mouse/anaconda3/envs/dlc2.1/lib/python3.6/site-packages/deeplabcut/pose_estimation_tensorflow/models/pretrained/resnet_v1_50.ckpt
+intermediate_supervision: false
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+location_refinement: true
+locref_huber_loss: true
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+max_input_size: 1500
+metadataset: training-datasets/iteration-3/UnaugmentedDataSet_eyesDec8/Documentation_data-eyes_95shuffle1.pickle
+min_input_size: 64
+minsize: 100
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+multi_step:
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+  - 10000
+- - 0.02
+  - 430000
+- - 0.002
+  - 730000
+- - 0.001
+  - 1030000
+net_type: resnet_50
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+pos_dist_thresh: 17
+project_path: /home/mouse/ks/Projects/eyes-Keisuke-2019-12-08
+rightwidth: 400
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