Keisuke Sehara
fe6e98dbf6
prepare for publication
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2 лет назад | |
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| .. | ||
| 01_raw @ 830ae08f51 | 2 лет назад | |
| 02_whisker-tracking @ 7471daeeb8 | 2 лет назад | |
| 03_eye-tracking @ 10bfcc04ad | 2 лет назад | |
| 04_formatted @ b82f432055 | 2 лет назад | |
| resources | 2 лет назад | |
| README.md | 2 лет назад | |
top): AVI files taken at 200 Hz using ZR View (a custom video acquisition software) under the near-UV lighting, trial-based.left-eye and right-eye): AVI files taken at 100 Hz using PylonPD (a custom video acquisition software) under the IR-lighting, trial-based.states): CSV files containing manual annotation of behavioral states based on the top-view videos, trial-based.projection): PNG files containing a maximal projection of top-view video frames from each single trial.ROI): PNG files representing the mask for ROIs generated from the maximal projection images. These ROIs were used for the subsequent tracking.mask): MP4 files containing color masks generated by color-tracking procedure of videobatch.result): CSV files containing the center-of-mass positions of tracked whiskers (in pixels).| datacite.yml | |
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| Title | Data for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) |
| Authors |
Bergmann,Ronny;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany.;ORCID:0000-0002-1477-7502
Sehara,Keisuke;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany.;ORCID:0000-0003-4368-8143 Dominiak,Sina E.;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany. Colomb,Julien;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany.;ORCID:0000-0002-3127-5520 Kremkow,Jens;Charité–Universitätsmedizin Berlin, Berlin, 10117 Germany.;ORCID:0000-0001-7077-4528 Larkum,Matthew E.;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany.;ORCID:0000-0001-9799-2656 Sachdev,Robert N.S.;Institut für Biologie, Humboldt Universität zu Berlin, Berlin, 10117 Germany.;ORCID:0000-0002-6627-0199 |
| Description | Data repository for Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS, 2022 eNeuro "Coordination between eye movement and whisking in head fixed mice navigating a plus-maze". This repository contains the raw and the formatted data, code for generating figures, and some demo code to work with analysis python modules. |
| License | Creative Commons 4.0 Attribution (https://creativecommons.org/licenses/by/4.0/) |
| References |
Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) Coordination between eye movement and whisking in head fixed mice navigating a plus-maze. [https://doi.org/10.1523/ENEURO.0089-22.2022] (IsSupplementTo)
Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) Raw data for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) [] (HasPart) Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) Whisker-tracking data for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) [] (HasPart) Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) Eye-tracking data for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) [] (HasPart) Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) Formatted data for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) [] (HasPart) Bergmann R, Sehara K, Dominiak SE, Kremkow J, Larkum ME, Sachdev RNS (2022) DeepLabCut model repository for Bergmann, Sehara et al., 2022 eNeuro (eye-whisker coordination on Airtrack) [] (HasPart) |
| Funding |
EU, EU.670118
EU, EU.327654276 EU, EU.720270 EU, EU.785907 EU, EU.945539 DFG, DFG.250048060 DFG, DFG.246731133 DFG, DFG.267823436 |
| Keywords |
Neuroscience
Behavioral tracking Motor coordination Whiskers Pupil tracking Airtrack |
| Resource Type |
Dataset |