Bergmann_2022_DataRepository/01_data

Datasets

• 01_raw: the raw data being analyzed:
  • top-view videos (top): AVI files taken at 200 Hz using ZR View (a custom video acquisition software) under the near-UV lighting, trial-based.
  • eye videos (left-eye and right-eye): AVI files taken at 100 Hz using PylonPD (a custom video acquisition software) under the IR-lighting, trial-based.
  • behavioral annotation (states): CSV files containing manual annotation of behavioral states based on the top-view videos, trial-based.
• 02_whisker-tracking: whisker tracking data based on the top-view videos, using the videobatch python module:
  • maximal projections (projection): PNG files containing a maximal projection of top-view video frames from each single trial.
  • ROIs (ROI): PNG files representing the mask for ROIs generated from the maximal projection images. These ROIs were used for the subsequent tracking.
  • color-tracking mask videos (mask): MP4 files containing color masks generated by color-tracking procedure of videobatch.
  • tracked whisker positions (result): CSV files containing the center-of-mass positions of tracked whiskers (in pixels).
• 03_eye-tracking: CSV files containing information about eye- and pupil-tracking based on the eye videos, using DeepLabCut and fitting2d.
• 04_formatted: the data being used for analysis. Includes a set of videos where the eye videos and behavioral annotations are aligned and overlaid on top of the top-view videos (video quality is not so high).