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juliankosciessa
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eegmp_preproc
DOI
10.12751/g-node.6nhr1y
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a7_prep_data_for_analysis
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eegmp_final_1.out

eegmp_final_1.out 8.9 KB
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  1. ------------------------------------------
    2. 

  2. Setting up environment variables
    3. 

  3. ---
    4. 

  4. LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
    5. 

  5. processing ID sub-001
    6. 

  6. the input is raw data with 72 channels and 1200 trials
    7. 

  7. Warning: could not determine dimord of "chanlocs" in:
    8. 

  8. 

  9.          hdr: [1x1 struct]
    10. 

  10.      fsample: 500
    11. 

  11.        trial: {1x1200 cell}
    12. 

  12.         time: {1x1200 cell}
    13. 

  13.        label: {72x1 cell}
    14. 

  14.          cfg: [1x1 struct]
    15. 

  15.         elec: [1x1 struct]
    16. 

  16.     chanlocs: [1x72 struct]
    17. 

  17. 

  18. 

  19.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
    20. 

  20.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
    21. 

  21.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
    22. 

  22.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
    23. 

  23.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
    24. 

  24.  In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
    25. 

  25. 

  26. Warning: could not determine dimord of "chanlocs" in:
    27. 

  27. 

  28.          hdr: [1x1 struct]
    29. 

  29.      fsample: 500
    30. 

  30.        trial: {1x1200 cell}
    31. 

  31.         time: {1x1200 cell}
    32. 

  32.        label: {72x1 cell}
    33. 

  33.          cfg: [1x1 struct]
    34. 

  34.         elec: [1x1 struct]
    35. 

  35.     chanlocs: [1x72 struct]
    36. 

  36. 

  37. 

  38. Warning: could not determine dimord of "chanlocs" in:
    39. 

  39. 

  40.          hdr: [1x1 struct]
    41. 

  41.      fsample: 500
    42. 

  42.        trial: {1x1200 cell}
    43. 

  43.         time: {1x1200 cell}
    44. 

  44.        label: {72x1 cell}
    45. 

  45.          cfg: [1x1 struct]
    46. 

  46.         elec: [1x1 struct]
    47. 

  47.     chanlocs: [1x72 struct]
    48. 

  48. 

  49. 

  50. Warning: could not determine dimord of "chanlocs" in:
    51. 

  51. 

  52.          hdr: [1x1 struct]
    53. 

  53.      fsample: 500
    54. 

  54.        trial: {1x1200 cell}
    55. 

  55.         time: {1x1200 cell}
    56. 

  56.        label: {72x1 cell}
    57. 

  57.          cfg: [1x1 struct]
    58. 

  58.         elec: [1x1 struct]
    59. 

  59.     chanlocs: [1x72 struct]
    60. 

  60. 

  61. 

  62. Warning: could not determine dimord of "chanlocs" in:
    63. 

  63. 

  64.          hdr: [1x1 struct]
    65. 

  65.      fsample: 500
    66. 

  66.        trial: {1x1200 cell}
    67. 

  67.         time: {1x1200 cell}
    68. 

  68.        label: {72x1 cell}
    69. 

  69.          cfg: [1x1 struct]
    70. 

  70.         elec: [1x1 struct]
    71. 

  71.     chanlocs: [1x72 struct]
    72. 

  72. 

  73. 

  74. the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 373 MB
    75. 

  75. baseline correcting data 
    76. 

  76. scaling data with 1 over 121.131884
    77. 

  77. not concatenating data
    78. 

  78. starting decomposition using predetermined unmixing matrix
    79. 

  79. also applying the unmixing matrix to the elec structure
    80. 

  80. Warning: copying input chantype to montage
    81. 

  81. Warning: copying input chanunit to montage
    82. 

  82. the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1376 MB
    83. 

  83. removing 8 components
    84. 

  84. keeping 63 components
    85. 

  85. the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
    86. 

  86. processing trials
    87. 

  87. processing trial 141 from 1200processing trial 290 from 1200processing trial 448 from 1200processing trial 608 from 1200processing trial 767 from 1200processing trial 927 from 1200processing trial 1051 from 1200processing trial 1142 from 1200processing trial 1200 from 1200
    88. 

  88. also applying the backprojection matrix to the elec structure
    89. 

  89. Warning: copying input chantype to montage
    90. 

  90. Warning: copying input chanunit to montage
    91. 

  91. the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
    92. 

  92. Warning: sampleinfo in the configuration is inconsistent with the actual data
    93. 

  93. Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
    94. 

  94. the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 38 MB
    95. 

  95. preprocessing
    96. 

  96. preprocessing trial 6 from 1081preprocessing trial 141 from 1081preprocessing trial 284 from 1081preprocessing trial 428 from 1081preprocessing trial 569 from 1081preprocessing trial 711 from 1081preprocessing trial 853 from 1081preprocessing trial 996 from 1081preprocessing trial 1081 from 1081
    97. 

  97. the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 40 MB
    98. 

  98. the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
    99. 

  99. preprocessing
    100. 

  100. preprocessing trial 25 from 1081preprocessing trial 58 from 1081preprocessing trial 95 from 1081preprocessing trial 132 from 1081preprocessing trial 168 from 1081preprocessing trial 206 from 1081preprocessing trial 242 from 1081preprocessing trial 279 from 1081preprocessing trial 318 from 1081preprocessing trial 355 from 1081preprocessing trial 392 from 1081preprocessing trial 430 from 1081preprocessing trial 469 from 1081preprocessing trial 507 from 1081preprocessing trial 542 from 1081preprocessing trial 578 from 1081preprocessing trial 615 from 1081preprocessing trial 651 from 1081preprocessing trial 688 from 1081preprocessing trial 726 from 1081preprocessing trial 763 from 1081preprocessing trial 801 from 1081preprocessing trial 836 from 1081preprocessing trial 874 from 1081preprocessing trial 912 from 1081preprocessing trial 950 from 1081preprocessing trial 986 from 1081preprocessing trial 1013 from 1081preprocessing trial 1043 from 1081preprocessing trial 1081 from 1081
    101. 

  101. the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 4 MB
    102. 

  102. the input is raw data with 66 channels and 1081 trials
    103. 

  103. the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
    104. 

  104. assuming that the data is EEG, use cfg.senstype to overrule this
    105. 

  105. Your data and configuration allow for multiple sensor definitions.
    106. 

  106. Warning: using electrodes specified in the configuration\n
    107. 

  107. There are 2 bad channels
    108. 

  108. There are 0 missing channels
    109. 

  109. Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
    110. 

  110. Checking spherical fit... perfect spherical fit (residual: 0.0%)
    111. 

  111. computing weight matrix... done!
    112. 

  112. 

  113. interpolating channels for 1081 trials .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
    114. 

  114. the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB
    115.