distinguish annex and non-binary files

code/a4_ica_labeling.m

@@ -1 +0,0 @@
-../.git/annex/objects/pK/2f/MD5E-s2138--2f6104c96200fceee2997f1b2b163cef.m/MD5E-s2138--2f6104c96200fceee2997f1b2b163cef.m

code/a4_ica_labeling.m

@@ -0,0 +1,89 @@
+%% a4_ica_labeling
+
+% required functions:
+% - cm_label_ica_gui_20180116
+
+currentFile = mfilename('fullpath');
+[pathstr,~,~] = fileparts(currentFile);
+cd(fullfile(pathstr,'..'))
+rootpath = pwd;
+
+% inputs
+pn.eeg_BIDS = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'eeg_BIDS');
+pn.channel_locations = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'channel_locations');
+pn.events = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'events');
+pn.tools = fullfile(rootpath, 'tools');
+% outputs
+pn.eeg_ft = fullfile(rootpath, 'data', 'outputs', 'eeg');
+pn.history = fullfile(rootpath, 'data', 'outputs', 'history');
+
+addpath(fullfile(pn.tools, 'fieldtrip')); ft_defaults;
+addpath(fullfile(pn.tools, 'helpers'));
+
+%% define IDs for visual screening
+
+ID = 'sub-033';
+
+%% load data & start GUI
+
+% load data (full data)
+load(fullfile(pn.eeg_ft, [ID, '_task-xxxx_eeg_ica.mat']),'data');
+
+if ~isfield(data.iclabels,'emg')
+    data.iclabels.emg = [];
+end
+
+% load config (ICA version)
+load(fullfile(pn.history, [ID, '_task-xxxx_config.mat']),'config');
+
+% settings for ICA
+
+% ica config
+cfg.method           = config.ica1.cfg.method; %'runica';
+cfg.trials           = 'all';
+cfg.numcomponent     = 'all';
+cfg.demean           = 'no';
+cfg.runica.extended  = 1;
+
+% ICA solution for segments
+cfg.unmixing     = data.unmixing;
+cfg.topolabel    = data.topolabel;
+
+% ICA (from weights)
+
+% components
+comp = ft_componentanalysis(cfg,data);
+    
+% include electrode information
+comp.elec = data.elec;
+
+% include ICA labeling
+comp.iclabels = data.iclabels;
+
+% clear cfg
+clear cfg
+
+% label ICs
+
+% settings
+cfg.topoall  = 'yes';
+cfg.chanlocs = data.chanlocs;
+
+% label electrodes
+data.iclabels = cm_label_ica_gui_20180116(cfg,comp);
+
+% keep labels in config
+config.ica1.iclabels.manual = data.iclabels;
+
+% clear variables
+clear cfg
+
+% save data (full data)
+save(fullfile(pn.eeg_ft, [ID, '_task-xxxx_eeg_ica.mat']),'data');
+
+% save config (ICA version)
+save(fullfile(pn.history, [ID, '_task-xxxx_config.mat']),'config');
+
+% clear variables
+
+clear BLOCK ID comp config data

code/a5_segmentation_raw_data/a5_segmentation_raw_data.m

@@ -1 +0,0 @@
-../../.git/annex/objects/g3/XK/MD5E-s3752--6a4119f7e05769d6907083f356fddd7c.m/MD5E-s3752--6a4119f7e05769d6907083f356fddd7c.m

code/a5_segmentation_raw_data/a5_segmentation_raw_data.m

@@ -0,0 +1,135 @@
+function a5_segmentation_raw_data(id, rootpath)
+
+if ismac % run if function is not pre-compiled
+    id = '1'; % test for example subject
+    currentFile = mfilename('fullpath');
+    [pathstr,~,~] = fileparts(currentFile);
+    cd(fullfile(pathstr,'..', '..'))
+    rootpath = pwd;
+end
+
+% inputs
+pn.eeg_BIDS = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'eeg_BIDS');
+pn.channel_locations = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'channel_locations');
+pn.events = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'events');
+pn.tools = fullfile(rootpath, 'tools');
+% outputs
+pn.eeg_ft = fullfile(rootpath, 'data', 'outputs', 'eeg');
+pn.history = fullfile(rootpath, 'data', 'outputs', 'history');
+
+if ismac % run if function is not pre-compiled
+     addpath(fullfile(pn.tools, 'fieldtrip')); ft_defaults;
+     addpath(fullfile(pn.tools, 'helpers'));
+end
+
+% N = 33
+IDs = tdfread(fullfile(pn.eeg_BIDS, 'participants.tsv'));
+IDs = cellstr(IDs.participant_id);
+
+id = str2num(id);
+
+display(['processing ID ' num2str(IDs{id})]);
+    
+%%  load raw data
+
+if ~exist(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_seg.mat']),'file')
+
+    % load config
+    config = [];
+    load(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+    %% load events file
+    
+    events = readtable(fullfile(pn.events, ['EMP',IDs{id}(end-1:end),'_events.csv']));
+    
+    %% generate segmentation structure
+
+    % load marker file
+    mrk = config.mrk;
+    
+    % generate trial structure
+    mrk_val = {mrk(1,:).value};
+    indOnset = find(strcmp(mrk_val(:),'boundary')) + 1;
+    mrk_val = mrk_val(indOnset:end);
+
+    % Stim trials
+    fsample = 512;
+    trl = zeros(length(mrk_val),3);
+    TOI1 = 1*fsample; % segmentation before trigger (s x fsample)
+    TOI2 = 2*fsample; % segmentation following trigger (s x fsample)
+
+    for j = 1:size(trl,1)
+        trl(j,1) = mrk(1,indOnset+j-1).sample - TOI1;
+        trl(j,2) = mrk(1,indOnset+j-1).sample + TOI2;
+        trl(j,3) = -TOI1; % offset
+    end; clear j
+
+    % add trial structure to config
+    config.trl = trl;
+
+    %% load, filter, and re-reference raw data
+
+    % define reading & preprocessing parameters
+    % read in all data first
+
+    % load data
+    cfg           = [];
+    cfg.datafile  = ...
+        fullfile(pn.eeg_BIDS, IDs{id}, 'eeg', [IDs{id}, '_task-xxxx_eeg.eeg']);
+    cfg.trl         = config.trl;
+    cfg.channel     = {'all'};
+
+    data_eeg            = ft_preprocessing(cfg);
+
+    %% reref & filter EEG data
+    
+    cfg             = [];
+
+    cfg.continuous  = 'yes';
+    cfg.demean      = 'yes';
+
+    cfg.reref       = 'yes';
+    cfg.refmethod   = 'avg';
+    cfg.refchannel  = {'M1', 'M2'};
+    cfg.implicitref = 'POz';
+
+    cfg.hpfilter    = 'yes';
+    cfg.hpfreq      = .2;
+    cfg.hpfiltord   = 4;
+    cfg.hpfilttype  = 'but';
+
+    cfg.lpfilter    = 'yes';
+    cfg.lpfreq      = 125;
+    cfg.lpfiltord   = 4;
+    cfg.lpfilttype  = 'but';
+
+    % get data
+    data_eeg = ft_preprocessing(cfg, data_eeg);
+    flt = cfg;
+
+    % clear cfg structure
+    clear cfg
+
+    %% resample to 500 Hz
+
+    % define settings for resampling
+    cfg.resamplefs = 500;
+    cfg.detrend    = 'no';
+    cfg.feedback   = 'no';
+    cfg.trials     = 'all';
+    data_eeg    = ft_resampledata(cfg,data_eeg);
+
+    resample = cfg;
+    % clear variables
+    clear cfg
+
+    % update config
+    config.seg.flt = flt;
+    config.seg.resample = resample;
+
+    %% save eeg data and history
+    
+    save(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_seg.mat']),'data_eeg', 'events');
+    save(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+end % exist

code/a5_segmentation_raw_data/logs/eegmp_prep_33.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/p8/Z2/MD5E-s265--b47bd2cd9de9755d7419721772ae9a20.out/MD5E-s265--b47bd2cd9de9755d7419721772ae9a20.out

code/a5_segmentation_raw_data/logs/eegmp_prep_33.out

@@ -0,0 +1,5 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-033

code/a6_automatic_artifact_correction/a6_automatic_artifact_correction.m

@@ -1 +0,0 @@
-../../.git/annex/objects/kM/7V/MD5E-s6925--6213a2869ce3496f9aa1a025de3c687d.m/MD5E-s6925--6213a2869ce3496f9aa1a025de3c687d.m

code/a6_automatic_artifact_correction/a6_automatic_artifact_correction.m

@@ -0,0 +1,253 @@
+function a6_automatic_artifact_correction(id, rootpath)
+
+if ismac % run if function is not pre-compiled
+    id = '21'; % test for example subject
+    currentFile = mfilename('fullpath');
+    [pathstr,~,~] = fileparts(currentFile);
+    cd(fullfile(pathstr,'..', '..'))
+    rootpath = pwd;
+end
+
+% inputs
+pn.eeg_BIDS = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'eeg_BIDS');
+pn.channel_locations = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'channel_locations');
+pn.events = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'events');
+pn.tools = fullfile(rootpath, 'tools');
+% outputs
+pn.eeg_ft = fullfile(rootpath, 'data', 'outputs', 'eeg');
+pn.history = fullfile(rootpath, 'data', 'outputs', 'history');
+
+if ismac % run if function is not pre-compiled
+     addpath(fullfile(pn.tools, 'fieldtrip')); ft_defaults;
+     addpath(fullfile(pn.tools, 'helpers'));
+end
+
+% N = 33
+IDs = tdfread(fullfile(pn.eeg_BIDS, 'participants.tsv'));
+IDs = cellstr(IDs.participant_id);
+
+id = str2num(id);
+
+display(['processing ID ' num2str(IDs{id})]);
+
+%% load data
+
+load(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_seg.mat']),'data_eeg', 'events');
+
+% remove M2 (collinear with M1 due to avg. mastoid REF: mean(M1,M2)=0)
+cfg_preproc               = [];
+cfg_preproc.channel       = {'all', '-M2'};
+data_eeg = ft_preprocessing(cfg_preproc, data_eeg);
+
+data_ica = load(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_ica.mat']),'data');
+
+data = data_eeg; clear data_eeg;
+data.elec = data_ica.data.elec;
+data.chanlocs = data_ica.data.chanlocs; clear data_ica;
+
+%% ------------------ ARTIFACT DETECTION - PREPARATION ----------------- %%
+
+% load config
+
+load(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+config.elec = data.elec;
+
+%% ICA (from weights)
+
+% ica config
+cfg.method           = 'runica';
+cfg.channel          = {'all'}; % additional channels should be excluded already...
+cfg.trials           = 'all';
+cfg.numcomponent     = 'all';
+cfg.demean           = 'yes';
+cfg.runica.extended  = 1;
+
+% ICA solution
+cfg.unmixing     = config.ica1.unmixing;
+cfg.topolabel    = config.ica1.topolabel;
+
+% components
+comp = ft_componentanalysis(cfg,data);
+
+% clear cfg
+clear cfg data
+
+%% remove components
+
+% get IC labels
+iclabels = config.ica1.iclabels.manual;
+
+% cfg for rejecting components (reject: blinks, eye movements,
+% ecg, ref); JQK: added artifacts and emg
+cfg.component = sortrows([iclabels.bli(:); iclabels.mov(:); iclabels.hrt(:); iclabels.ref(:); iclabels.art(:); iclabels.emg(:)])';
+cfg.demean    = 'yes';
+
+% reject components
+data = ft_rejectcomponent(cfg,comp);
+
+% clear cfg
+clear cfg comp
+
+%% remove eye & reference channels
+
+cfg.channel     = {'all','-IO1','-IO2','-M1','-VEOG','-HEOG'};
+cfg.demean      = 'yes';
+
+% remove channels
+tmpdat = ft_preprocessing(cfg,data);
+
+% clear cfg & data variable
+clear cfg data
+
+%% ------------------------- ARTIFACT DETECTION ------------------------ %%
+
+% open log file
+fid = fopen(fullfile(pn.history, [IDs{id}, '_task-xxxx_ArtCorr.txt']),'a');
+
+fprintf(fid,['*********************   BLOCK   *********************\n']);
+fprintf(fid,['function: a6_automatic_artifact_correction.m \n\n']);                
+fprintf(fid,['eeg file = ' config.data_file '\n\n']);
+
+n_trl = length(tmpdat.trial);
+
+%%  get artifact contaminated channels by kurtosis, low & high frequency artifacts
+
+cfg.criterion = 3;
+cfg.recursive = 'no';
+
+[index0 parm0 zval0] = cm_MWB_channel_x_epoch_artifacts_20170922(cfg,tmpdat);
+
+% write log
+tmp_log = '';
+for j = 1:length(index0.c)
+    tmp_log = [tmp_log num2str(index0.c(j)) ' '];
+end; clear j
+tmp_log = [tmp_log(1:end-1) '\n'];
+fprintf(fid,'(1) automatic bad channel detection:\n');
+fprintf(fid,['MWB:          channel(s) ' tmp_log]);
+
+% clear cfg
+clear cfg tmp_log
+
+%%  get artifact contaminated channels by FASTER
+
+cfg.criterion = 3;
+cfg.recursive = 'no';
+
+[index1 parm1 zval1] = THG_FASTER_1_channel_artifacts_20140302(cfg,tmpdat);
+
+% write log
+tmp_log = '';
+for j = 1:length(index1)
+    tmp_log = [tmp_log num2str(index1(j)) ' '];
+end; clear j
+tmp_log = [tmp_log(1:end-1) '\n'];
+fprintf(fid,['FASTER:      channel(s) ' tmp_log]);
+
+% clear cfg
+clear cfg tmp_log
+
+%%  interpolate artifact contaminated channels
+
+% collect bad channels
+badchan = unique([index0.c; index1]);
+
+if ~isempty(badchan)
+
+    fprintf(fid,['--> ' num2str(length(badchan)) ' channels interpolated\n\n']);
+
+    cfg.method     = 'spline';
+    cfg.badchannel = tmpdat.label(badchan);
+    cfg.trials     = 'all';
+    cfg.lambda     = 1e-5; 
+    cfg.order      = 4; 
+    cfg.elec       = config.elec;
+
+    % interpolate
+    tmpdat = ft_channelrepair(cfg,tmpdat);
+
+    % clear cfg
+    clear cfg
+    
+end
+
+%% equalize duration of trials to the trial with fewest samples
+
+for indTrial = 1:numel(tmpdat.trial)
+    TrialLength(indTrial) = size(tmpdat.trial{indTrial},2);
+end
+[val, idx] = min(TrialLength);
+for indTrial = 1:numel(tmpdat.trial)
+    tmpdat.trial{indTrial} = tmpdat.trial{indTrial}(:,1:val);
+    tmpdat.time{indTrial} = tmpdat.time{idx};
+end
+
+%%  get artifact contaminated epochs & exclude epochs
+% includes: - THG_MWB_channel_x_epoch_artifacts_20140311
+%           - THG_FASTER_2_epoch_artifacts_20140302
+% recursive epoch exclusion!
+
+[tmpdat index] = THG_automatic_artifact_correction_trials_20170922(tmpdat);
+
+% write log
+fprintf(fid,'(2) automatic recursive bad epoch detection:\n');
+fprintf(fid,['MWB & FASTER: ' num2str(n_trl-length(index)) ' bad epoch(s) detected\n\n']);
+
+%%  get channel x epoch artifacts
+
+% cfg
+cfg.criterion = 3;
+cfg.recursive = 'yes';
+
+[index3 parm3 zval3] = THG_FASTER_4_channel_x_epoch_artifacts_20140302(cfg,tmpdat);
+
+% write log
+fprintf(fid,'(3) automatic single epoch/channel detection:\n');
+fprintf(fid,['FASTER:       ' num2str(sum(sum(index3))) ' channel(s) x trial(s) detected\n\n']);
+
+% clear cfg
+clear cfg
+
+%%  collect and save detected artifacts & artifact correction infos
+
+% include ArtDect.parameters
+
+% bad channels
+ArtDect.channels = badchan;
+
+% bad trials
+tmp  = zeros(n_trl,1); tmp(index,1) = 1;
+badtrl = find(tmp==0);
+ArtDect.trials  = badtrl; 
+clear tmp
+
+% bad single epoch(s)/channel(s) - after exclusion of bad epochs
+ArtDect.channels_x_trials = index3;
+
+% overview
+ind = [1:n_trl];
+ind(badtrl) = [];
+tmp = ones(length(tmpdat.label),n_trl);
+tmp(:,ind) = index3;
+tmp(badchan,:) = 1;
+ArtDect.channels_x_trials_all = tmp;
+clear tmp
+
+% save version
+ArtDect.version = 'JQK 20180123';
+
+% add to config
+config.ArtDect = ArtDect;
+
+% save config
+save(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+%%  finalize log
+
+% log
+fprintf(fid,'Artifact detection completed.\n');
+fprintf(fid,['Information saved to: ' IDs{id} '_config.mat\n\n']);
+fclose(fid);
+
+end

code/a6_automatic_artifact_correction/logs/eegmp_art_1.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/7K/Kq/MD5E-s7727--e535074c317e819248b92d21151cc325.out/MD5E-s7727--e535074c317e819248b92d21151cc325.out

code/a6_automatic_artifact_correction/logs/eegmp_art_1.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-001
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 130 from 1200preprocessing trial 263 from 1200preprocessing trial 373 from 1200preprocessing trial 509 from 1200preprocessing trial 645 from 1200preprocessing trial 781 from 1200preprocessing trial 923 from 1200preprocessing trial 1057 from 1200preprocessing trial 1191 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1010 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 121.131884
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1010 MB
+removing 8 components
+keeping 63 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 131 from 1200processing trial 256 from 1200processing trial 397 from 1200processing trial 549 from 1200processing trial 703 from 1200processing trial 860 from 1200processing trial 1012 from 1200processing trial 1149 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 36 MB
+preprocessing
+preprocessing trial 35 from 1200preprocessing trial 73 from 1200preprocessing trial 111 from 1200preprocessing trial 150 from 1200preprocessing trial 186 from 1200preprocessing trial 225 from 1200preprocessing trial 262 from 1200preprocessing trial 300 from 1200preprocessing trial 337 from 1200preprocessing trial 375 from 1200preprocessing trial 414 from 1200preprocessing trial 452 from 1200preprocessing trial 477 from 1200preprocessing trial 516 from 1200preprocessing trial 553 from 1200preprocessing trial 593 from 1200preprocessing trial 632 from 1200preprocessing trial 669 from 1200preprocessing trial 707 from 1200preprocessing trial 747 from 1200preprocessing trial 787 from 1200preprocessing trial 827 from 1200preprocessing trial 866 from 1200preprocessing trial 905 from 1200preprocessing trial 944 from 1200preprocessing trial 983 from 1200preprocessing trial 1017 from 1200preprocessing trial 1042 from 1200preprocessing trial 1067 from 1200preprocessing trial 1091 from 1200preprocessing trial 1117 from 1200preprocessing trial 1153 from 1200preprocessing trial 1191 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 36 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_10.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/FX/KX/MD5E-s7858--d79988157f1bbe98ce4cd7d326a4b01f.out/MD5E-s7858--d79988157f1bbe98ce4cd7d326a4b01f.out

code/a6_automatic_artifact_correction/logs/eegmp_art_10.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-010
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 993 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 134 from 1200preprocessing trial 282 from 1200preprocessing trial 429 from 1200preprocessing trial 580 from 1200preprocessing trial 723 from 1200preprocessing trial 872 from 1200preprocessing trial 1014 from 1200preprocessing trial 1153 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1015 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 70.834579
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1001 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 116 from 1200processing trial 240 from 1200processing trial 378 from 1200processing trial 532 from 1200processing trial 690 from 1200processing trial 850 from 1200processing trial 1004 from 1200processing trial 1133 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 30 from 1200preprocessing trial 66 from 1200preprocessing trial 99 from 1200preprocessing trial 133 from 1200preprocessing trial 168 from 1200preprocessing trial 203 from 1200preprocessing trial 233 from 1200preprocessing trial 264 from 1200preprocessing trial 299 from 1200preprocessing trial 334 from 1200preprocessing trial 370 from 1200preprocessing trial 402 from 1200preprocessing trial 439 from 1200preprocessing trial 476 from 1200preprocessing trial 511 from 1200preprocessing trial 546 from 1200preprocessing trial 581 from 1200preprocessing trial 617 from 1200preprocessing trial 652 from 1200preprocessing trial 686 from 1200preprocessing trial 720 from 1200preprocessing trial 755 from 1200preprocessing trial 789 from 1200preprocessing trial 827 from 1200preprocessing trial 863 from 1200preprocessing trial 901 from 1200preprocessing trial 938 from 1200preprocessing trial 970 from 1200preprocessing trial 1001 from 1200preprocessing trial 1021 from 1200preprocessing trial 1044 from 1200preprocessing trial 1067 from 1200preprocessing trial 1092 from 1200preprocessing trial 1121 from 1200preprocessing trial 1155 from 1200preprocessing trial 1188 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 39 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_11.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/7z/PX/MD5E-s7914--129d04a988b288fc5cb1abb9605b8d03.out/MD5E-s7914--129d04a988b288fc5cb1abb9605b8d03.out

code/a6_automatic_artifact_correction/logs/eegmp_art_11.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-011
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 2 seconds and required the additional allocation of an estimated 994 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 128 from 1200preprocessing trial 270 from 1200preprocessing trial 378 from 1200preprocessing trial 495 from 1200preprocessing trial 622 from 1200preprocessing trial 760 from 1200preprocessing trial 900 from 1200preprocessing trial 1031 from 1200preprocessing trial 1164 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 1019 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 66.325346
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1003 MB
+removing 9 components
+keeping 62 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 116 from 1200processing trial 246 from 1200processing trial 372 from 1200processing trial 498 from 1200processing trial 623 from 1200processing trial 763 from 1200processing trial 914 from 1200processing trial 1041 from 1200processing trial 1179 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 29 from 1200preprocessing trial 63 from 1200preprocessing trial 96 from 1200preprocessing trial 129 from 1200preprocessing trial 161 from 1200preprocessing trial 193 from 1200preprocessing trial 226 from 1200preprocessing trial 259 from 1200preprocessing trial 295 from 1200preprocessing trial 331 from 1200preprocessing trial 368 from 1200preprocessing trial 406 from 1200preprocessing trial 443 from 1200preprocessing trial 482 from 1200preprocessing trial 517 from 1200preprocessing trial 552 from 1200preprocessing trial 586 from 1200preprocessing trial 623 from 1200preprocessing trial 660 from 1200preprocessing trial 697 from 1200preprocessing trial 735 from 1200preprocessing trial 772 from 1200preprocessing trial 809 from 1200preprocessing trial 847 from 1200preprocessing trial 880 from 1200preprocessing trial 913 from 1200preprocessing trial 947 from 1200preprocessing trial 982 from 1200preprocessing trial 1011 from 1200preprocessing trial 1035 from 1200preprocessing trial 1056 from 1200preprocessing trial 1080 from 1200preprocessing trial 1105 from 1200preprocessing trial 1137 from 1200preprocessing trial 1174 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_12.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/25/w1/MD5E-s7724--3e6118250c6fae55657c1db4e10c0c4a.out/MD5E-s7724--3e6118250c6fae55657c1db4e10c0c4a.out

code/a6_automatic_artifact_correction/logs/eegmp_art_12.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-012
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 135 from 1200preprocessing trial 276 from 1200preprocessing trial 413 from 1200preprocessing trial 552 from 1200preprocessing trial 696 from 1200preprocessing trial 822 from 1200preprocessing trial 966 from 1200preprocessing trial 1088 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1012 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 165.875505
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1009 MB
+removing 17 components
+keeping 54 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 141 from 1200processing trial 301 from 1200processing trial 461 from 1200processing trial 620 from 1200processing trial 780 from 1200processing trial 939 from 1200processing trial 1044 from 1200processing trial 1170 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 70 from 1200preprocessing trial 107 from 1200preprocessing trial 145 from 1200preprocessing trial 180 from 1200preprocessing trial 218 from 1200preprocessing trial 253 from 1200preprocessing trial 288 from 1200preprocessing trial 323 from 1200preprocessing trial 361 from 1200preprocessing trial 398 from 1200preprocessing trial 434 from 1200preprocessing trial 472 from 1200preprocessing trial 511 from 1200preprocessing trial 547 from 1200preprocessing trial 584 from 1200preprocessing trial 621 from 1200preprocessing trial 657 from 1200preprocessing trial 692 from 1200preprocessing trial 728 from 1200preprocessing trial 765 from 1200preprocessing trial 804 from 1200preprocessing trial 838 from 1200preprocessing trial 876 from 1200preprocessing trial 916 from 1200preprocessing trial 955 from 1200preprocessing trial 992 from 1200preprocessing trial 1019 from 1200preprocessing trial 1037 from 1200preprocessing trial 1061 from 1200preprocessing trial 1081 from 1200preprocessing trial 1109 from 1200preprocessing trial 1144 from 1200preprocessing trial 1180 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_13.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/Q8/k8/MD5E-s7664--499199cdea082a17c1704da497568265.out/MD5E-s7664--499199cdea082a17c1704da497568265.out

code/a6_automatic_artifact_correction/logs/eegmp_art_13.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-013
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 140 from 1200preprocessing trial 288 from 1200preprocessing trial 428 from 1200preprocessing trial 571 from 1200preprocessing trial 718 from 1200preprocessing trial 867 from 1200preprocessing trial 1011 from 1200preprocessing trial 1154 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1010 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 203.456122
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1006 MB
+removing 12 components
+keeping 59 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 136 from 1200processing trial 287 from 1200processing trial 441 from 1200processing trial 600 from 1200processing trial 760 from 1200processing trial 919 from 1200processing trial 1052 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 69 from 1200preprocessing trial 106 from 1200preprocessing trial 143 from 1200preprocessing trial 180 from 1200preprocessing trial 214 from 1200preprocessing trial 249 from 1200preprocessing trial 284 from 1200preprocessing trial 318 from 1200preprocessing trial 353 from 1200preprocessing trial 387 from 1200preprocessing trial 423 from 1200preprocessing trial 459 from 1200preprocessing trial 494 from 1200preprocessing trial 531 from 1200preprocessing trial 569 from 1200preprocessing trial 605 from 1200preprocessing trial 643 from 1200preprocessing trial 682 from 1200preprocessing trial 720 from 1200preprocessing trial 758 from 1200preprocessing trial 795 from 1200preprocessing trial 829 from 1200preprocessing trial 863 from 1200preprocessing trial 900 from 1200preprocessing trial 938 from 1200preprocessing trial 976 from 1200preprocessing trial 1007 from 1200preprocessing trial 1025 from 1200preprocessing trial 1044 from 1200preprocessing trial 1062 from 1200preprocessing trial 1088 from 1200preprocessing trial 1126 from 1200preprocessing trial 1165 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_14.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/0K/07/MD5E-s7864--52cd9c233495ddbc6ddfaef0d06395d5.out/MD5E-s7864--52cd9c233495ddbc6ddfaef0d06395d5.out

code/a6_automatic_artifact_correction/logs/eegmp_art_14.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-014
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 991 MB
+preprocessing
+preprocessing trial 4 from 1200preprocessing trial 108 from 1200preprocessing trial 258 from 1200preprocessing trial 414 from 1200preprocessing trial 567 from 1200preprocessing trial 720 from 1200preprocessing trial 876 from 1200preprocessing trial 1028 from 1200preprocessing trial 1175 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1018 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 262.522723
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1003 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 149 from 1200processing trial 302 from 1200processing trial 468 from 1200processing trial 632 from 1200processing trial 795 from 1200processing trial 958 from 1200processing trial 1083 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 42 MB
+preprocessing
+preprocessing trial 28 from 1200preprocessing trial 61 from 1200preprocessing trial 95 from 1200preprocessing trial 130 from 1200preprocessing trial 164 from 1200preprocessing trial 197 from 1200preprocessing trial 230 from 1200preprocessing trial 260 from 1200preprocessing trial 291 from 1200preprocessing trial 325 from 1200preprocessing trial 361 from 1200preprocessing trial 397 from 1200preprocessing trial 433 from 1200preprocessing trial 467 from 1200preprocessing trial 503 from 1200preprocessing trial 537 from 1200preprocessing trial 572 from 1200preprocessing trial 607 from 1200preprocessing trial 642 from 1200preprocessing trial 677 from 1200preprocessing trial 714 from 1200preprocessing trial 750 from 1200preprocessing trial 786 from 1200preprocessing trial 822 from 1200preprocessing trial 859 from 1200preprocessing trial 895 from 1200preprocessing trial 932 from 1200preprocessing trial 965 from 1200preprocessing trial 997 from 1200preprocessing trial 1016 from 1200preprocessing trial 1030 from 1200preprocessing trial 1049 from 1200preprocessing trial 1073 from 1200preprocessing trial 1102 from 1200preprocessing trial 1135 from 1200preprocessing trial 1167 from 1200preprocessing trial 1199 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 43 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_15.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/zx/PV/MD5E-s7794--01f42be5c7eb49b63d2abe69ed9cd024.out/MD5E-s7794--01f42be5c7eb49b63d2abe69ed9cd024.out

code/a6_automatic_artifact_correction/logs/eegmp_art_15.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-015
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 990 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 140 from 1200preprocessing trial 286 from 1200preprocessing trial 433 from 1200preprocessing trial 577 from 1200preprocessing trial 723 from 1200preprocessing trial 870 from 1200preprocessing trial 1009 from 1200preprocessing trial 1130 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1012 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+baseline correcting data 
+scaling data with 1 over 178.474136
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1007 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 142 from 1200processing trial 300 from 1200processing trial 457 from 1200processing trial 612 from 1200processing trial 769 from 1200processing trial 925 from 1200processing trial 1050 from 1200processing trial 1193 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 43 MB
+preprocessing
+preprocessing trial 34 from 1200preprocessing trial 71 from 1200preprocessing trial 104 from 1200preprocessing trial 137 from 1200preprocessing trial 171 from 1200preprocessing trial 206 from 1200preprocessing trial 242 from 1200preprocessing trial 278 from 1200preprocessing trial 313 from 1200preprocessing trial 350 from 1200preprocessing trial 384 from 1200preprocessing trial 419 from 1200preprocessing trial 451 from 1200preprocessing trial 487 from 1200preprocessing trial 522 from 1200preprocessing trial 556 from 1200preprocessing trial 592 from 1200preprocessing trial 627 from 1200preprocessing trial 662 from 1200preprocessing trial 693 from 1200preprocessing trial 729 from 1200preprocessing trial 767 from 1200preprocessing trial 804 from 1200preprocessing trial 840 from 1200preprocessing trial 878 from 1200preprocessing trial 917 from 1200preprocessing trial 954 from 1200preprocessing trial 987 from 1200preprocessing trial 1011 from 1200preprocessing trial 1034 from 1200preprocessing trial 1059 from 1200preprocessing trial 1079 from 1200preprocessing trial 1106 from 1200preprocessing trial 1145 from 1200preprocessing trial 1184 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 44 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_16.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/3w/0f/MD5E-s7660--e31814501e1ac2f2c40e6a15cffcf78e.out/MD5E-s7660--e31814501e1ac2f2c40e6a15cffcf78e.out

code/a6_automatic_artifact_correction/logs/eegmp_art_16.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-016
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 135 from 1200preprocessing trial 279 from 1200preprocessing trial 424 from 1200preprocessing trial 568 from 1200preprocessing trial 714 from 1200preprocessing trial 861 from 1200preprocessing trial 1005 from 1200preprocessing trial 1112 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1012 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 144.129731
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1009 MB
+removing 11 components
+keeping 60 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 118 from 1200processing trial 245 from 1200processing trial 380 from 1200processing trial 532 from 1200processing trial 691 from 1200processing trial 848 from 1200processing trial 1005 from 1200processing trial 1103 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 70 from 1200preprocessing trial 108 from 1200preprocessing trial 146 from 1200preprocessing trial 183 from 1200preprocessing trial 221 from 1200preprocessing trial 258 from 1200preprocessing trial 294 from 1200preprocessing trial 330 from 1200preprocessing trial 367 from 1200preprocessing trial 406 from 1200preprocessing trial 445 from 1200preprocessing trial 483 from 1200preprocessing trial 521 from 1200preprocessing trial 561 from 1200preprocessing trial 601 from 1200preprocessing trial 640 from 1200preprocessing trial 679 from 1200preprocessing trial 719 from 1200preprocessing trial 757 from 1200preprocessing trial 797 from 1200preprocessing trial 837 from 1200preprocessing trial 874 from 1200preprocessing trial 910 from 1200preprocessing trial 950 from 1200preprocessing trial 991 from 1200preprocessing trial 1025 from 1200preprocessing trial 1052 from 1200preprocessing trial 1078 from 1200preprocessing trial 1103 from 1200preprocessing trial 1128 from 1200preprocessing trial 1158 from 1200preprocessing trial 1196 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_17.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/PJ/zq/MD5E-s7860--c1ae41d3b3622de282cd60b00bfcdeb9.out/MD5E-s7860--c1ae41d3b3622de282cd60b00bfcdeb9.out

code/a6_automatic_artifact_correction/logs/eegmp_art_17.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-017
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 991 MB
+preprocessing
+preprocessing trial 2 from 1200preprocessing trial 101 from 1200preprocessing trial 191 from 1200preprocessing trial 256 from 1200preprocessing trial 312 from 1200preprocessing trial 369 from 1200preprocessing trial 445 from 1200preprocessing trial 534 from 1200preprocessing trial 636 from 1200preprocessing trial 734 from 1200preprocessing trial 834 from 1200preprocessing trial 935 from 1200preprocessing trial 1069 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 1016 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 113.734056
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1010 MB
+removing 14 components
+keeping 57 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 150 from 1200processing trial 314 from 1200processing trial 482 from 1200processing trial 653 from 1200processing trial 824 from 1200processing trial 983 from 1200processing trial 1104 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 35 from 1200preprocessing trial 74 from 1200preprocessing trial 112 from 1200preprocessing trial 149 from 1200preprocessing trial 189 from 1200preprocessing trial 230 from 1200preprocessing trial 269 from 1200preprocessing trial 308 from 1200preprocessing trial 348 from 1200preprocessing trial 381 from 1200preprocessing trial 419 from 1200preprocessing trial 454 from 1200preprocessing trial 491 from 1200preprocessing trial 528 from 1200preprocessing trial 565 from 1200preprocessing trial 604 from 1200preprocessing trial 642 from 1200preprocessing trial 679 from 1200preprocessing trial 717 from 1200preprocessing trial 754 from 1200preprocessing trial 791 from 1200preprocessing trial 829 from 1200preprocessing trial 869 from 1200preprocessing trial 906 from 1200preprocessing trial 942 from 1200preprocessing trial 978 from 1200preprocessing trial 1007 from 1200preprocessing trial 1029 from 1200preprocessing trial 1056 from 1200preprocessing trial 1083 from 1200preprocessing trial 1121 from 1200preprocessing trial 1154 from 1200preprocessing trial 1191 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_18.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/5K/1W/MD5E-s7657--403238dc66cbe674e3b1ed0f80759669.out/MD5E-s7657--403238dc66cbe674e3b1ed0f80759669.out

code/a6_automatic_artifact_correction/logs/eegmp_art_18.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-018
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 137 from 1200preprocessing trial 283 from 1200preprocessing trial 432 from 1200preprocessing trial 578 from 1200preprocessing trial 720 from 1200preprocessing trial 866 from 1200preprocessing trial 1011 from 1200preprocessing trial 1146 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 201.461359
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 982 MB
+removing 11 components
+keeping 60 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 130 from 1200processing trial 288 from 1200processing trial 447 from 1200processing trial 605 from 1200processing trial 744 from 1200processing trial 872 from 1200processing trial 1003 from 1200processing trial 1116 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 36 from 1200preprocessing trial 75 from 1200preprocessing trial 113 from 1200preprocessing trial 148 from 1200preprocessing trial 188 from 1200preprocessing trial 227 from 1200preprocessing trial 264 from 1200preprocessing trial 301 from 1200preprocessing trial 339 from 1200preprocessing trial 379 from 1200preprocessing trial 399 from 1200preprocessing trial 425 from 1200preprocessing trial 460 from 1200preprocessing trial 496 from 1200preprocessing trial 533 from 1200preprocessing trial 570 from 1200preprocessing trial 608 from 1200preprocessing trial 648 from 1200preprocessing trial 688 from 1200preprocessing trial 728 from 1200preprocessing trial 765 from 1200preprocessing trial 805 from 1200preprocessing trial 845 from 1200preprocessing trial 883 from 1200preprocessing trial 921 from 1200preprocessing trial 959 from 1200preprocessing trial 998 from 1200preprocessing trial 1019 from 1200preprocessing trial 1045 from 1200preprocessing trial 1075 from 1200preprocessing trial 1107 from 1200preprocessing trial 1143 from 1200preprocessing trial 1182 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_19.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/gX/F6/MD5E-s7662--f3f4a2de8e42167bc285b17ef09b94bf.out/MD5E-s7662--f3f4a2de8e42167bc285b17ef09b94bf.out

code/a6_automatic_artifact_correction/logs/eegmp_art_19.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-019
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 135 from 1200preprocessing trial 278 from 1200preprocessing trial 422 from 1200preprocessing trial 567 from 1200preprocessing trial 707 from 1200preprocessing trial 852 from 1200preprocessing trial 996 from 1200preprocessing trial 1134 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1012 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 711.738200
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1001 MB
+removing 17 components
+keeping 54 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 138 from 1200processing trial 293 from 1200processing trial 452 from 1200processing trial 617 from 1200processing trial 782 from 1200processing trial 947 from 1200processing trial 1061 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 35 from 1200preprocessing trial 72 from 1200preprocessing trial 109 from 1200preprocessing trial 148 from 1200preprocessing trial 183 from 1200preprocessing trial 220 from 1200preprocessing trial 257 from 1200preprocessing trial 295 from 1200preprocessing trial 333 from 1200preprocessing trial 370 from 1200preprocessing trial 405 from 1200preprocessing trial 440 from 1200preprocessing trial 477 from 1200preprocessing trial 513 from 1200preprocessing trial 547 from 1200preprocessing trial 581 from 1200preprocessing trial 617 from 1200preprocessing trial 653 from 1200preprocessing trial 690 from 1200preprocessing trial 726 from 1200preprocessing trial 763 from 1200preprocessing trial 801 from 1200preprocessing trial 831 from 1200preprocessing trial 866 from 1200preprocessing trial 901 from 1200preprocessing trial 939 from 1200preprocessing trial 976 from 1200preprocessing trial 1006 from 1200preprocessing trial 1028 from 1200preprocessing trial 1051 from 1200preprocessing trial 1074 from 1200preprocessing trial 1098 from 1200preprocessing trial 1127 from 1200preprocessing trial 1165 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_2.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/1k/g4/MD5E-s7794--e79ac87bd19271c2542d4d7d352237f9.out/MD5E-s7794--e79ac87bd19271c2542d4d7d352237f9.out

code/a6_automatic_artifact_correction/logs/eegmp_art_2.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-002
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 129 from 1200preprocessing trial 263 from 1200preprocessing trial 372 from 1200preprocessing trial 508 from 1200preprocessing trial 645 from 1200preprocessing trial 779 from 1200preprocessing trial 917 from 1200preprocessing trial 1050 from 1200preprocessing trial 1183 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1009 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 78.176106
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1001 MB
+removing 10 components
+keeping 61 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 124 from 1200processing trial 289 from 1200processing trial 451 from 1200processing trial 611 from 1200processing trial 769 from 1200processing trial 931 from 1200processing trial 1055 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 29 from 1200preprocessing trial 61 from 1200preprocessing trial 99 from 1200preprocessing trial 135 from 1200preprocessing trial 172 from 1200preprocessing trial 207 from 1200preprocessing trial 242 from 1200preprocessing trial 280 from 1200preprocessing trial 318 from 1200preprocessing trial 356 from 1200preprocessing trial 390 from 1200preprocessing trial 426 from 1200preprocessing trial 462 from 1200preprocessing trial 498 from 1200preprocessing trial 535 from 1200preprocessing trial 571 from 1200preprocessing trial 606 from 1200preprocessing trial 640 from 1200preprocessing trial 673 from 1200preprocessing trial 708 from 1200preprocessing trial 741 from 1200preprocessing trial 775 from 1200preprocessing trial 810 from 1200preprocessing trial 844 from 1200preprocessing trial 878 from 1200preprocessing trial 912 from 1200preprocessing trial 946 from 1200preprocessing trial 981 from 1200preprocessing trial 1011 from 1200preprocessing trial 1032 from 1200preprocessing trial 1050 from 1200preprocessing trial 1073 from 1200preprocessing trial 1101 from 1200preprocessing trial 1135 from 1200preprocessing trial 1171 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 10 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_20.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/QP/MF/MD5E-s7788--17d71d6b78b745aa8901c68df8b706bc.out/MD5E-s7788--17d71d6b78b745aa8901c68df8b706bc.out

code/a6_automatic_artifact_correction/logs/eegmp_art_20.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-020
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 987 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 135 from 1200preprocessing trial 281 from 1200preprocessing trial 430 from 1200preprocessing trial 579 from 1200preprocessing trial 728 from 1200preprocessing trial 875 from 1200preprocessing trial 1017 from 1200preprocessing trial 1160 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1010 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 306.700748
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1025 MB
+removing 20 components
+keeping 51 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 148 from 1200processing trial 301 from 1200processing trial 435 from 1200processing trial 561 from 1200processing trial 685 from 1200processing trial 813 from 1200processing trial 940 from 1200processing trial 1041 from 1200processing trial 1189 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 49 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 69 from 1200preprocessing trial 106 from 1200preprocessing trial 142 from 1200preprocessing trial 177 from 1200preprocessing trial 211 from 1200preprocessing trial 246 from 1200preprocessing trial 281 from 1200preprocessing trial 316 from 1200preprocessing trial 352 from 1200preprocessing trial 389 from 1200preprocessing trial 426 from 1200preprocessing trial 456 from 1200preprocessing trial 491 from 1200preprocessing trial 528 from 1200preprocessing trial 565 from 1200preprocessing trial 602 from 1200preprocessing trial 638 from 1200preprocessing trial 675 from 1200preprocessing trial 712 from 1200preprocessing trial 751 from 1200preprocessing trial 791 from 1200preprocessing trial 829 from 1200preprocessing trial 868 from 1200preprocessing trial 908 from 1200preprocessing trial 947 from 1200preprocessing trial 986 from 1200preprocessing trial 1011 from 1200preprocessing trial 1037 from 1200preprocessing trial 1062 from 1200preprocessing trial 1088 from 1200preprocessing trial 1122 from 1200preprocessing trial 1160 from 1200preprocessing trial 1189 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 50 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_21.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/wg/gp/MD5E-s151221--18d61b069a95763add6e515b9424e884.out/MD5E-s151221--18d61b069a95763add6e515b9424e884.out

code/a6_automatic_artifact_correction/logs/eegmp_art_22.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/w9/6q/MD5E-s7529--b02d5f46b58351957356a2b42774864f.out/MD5E-s7529--b02d5f46b58351957356a2b42774864f.out

code/a6_automatic_artifact_correction/logs/eegmp_art_22.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-022
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 138 from 1200preprocessing trial 285 from 1200preprocessing trial 434 from 1200preprocessing trial 583 from 1200preprocessing trial 732 from 1200preprocessing trial 880 from 1200preprocessing trial 1025 from 1200preprocessing trial 1165 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1018 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 3 MB
+baseline correcting data 
+scaling data with 1 over 358.353863
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 991 MB
+removing 13 components
+keeping 58 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+processing trials
+processing trial 136 from 1200processing trial 296 from 1200processing trial 456 from 1200processing trial 617 from 1200processing trial 777 from 1200processing trial 933 from 1200processing trial 1055 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 5 MB
+preprocessing
+preprocessing trial 31 from 1200preprocessing trial 68 from 1200preprocessing trial 106 from 1200preprocessing trial 143 from 1200preprocessing trial 181 from 1200preprocessing trial 218 from 1200preprocessing trial 255 from 1200preprocessing trial 293 from 1200preprocessing trial 331 from 1200preprocessing trial 369 from 1200preprocessing trial 407 from 1200preprocessing trial 445 from 1200preprocessing trial 483 from 1200preprocessing trial 522 from 1200preprocessing trial 561 from 1200preprocessing trial 599 from 1200preprocessing trial 638 from 1200preprocessing trial 675 from 1200preprocessing trial 714 from 1200preprocessing trial 752 from 1200preprocessing trial 792 from 1200preprocessing trial 831 from 1200preprocessing trial 869 from 1200preprocessing trial 907 from 1200preprocessing trial 945 from 1200preprocessing trial 983 from 1200preprocessing trial 1012 from 1200preprocessing trial 1039 from 1200preprocessing trial 1068 from 1200preprocessing trial 1097 from 1200preprocessing trial 1136 from 1200preprocessing trial 1174 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_23.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/Jj/mW/MD5E-s7792--2c562638d0694951a296f6ceb77e79c4.out/MD5E-s7792--2c562638d0694951a296f6ceb77e79c4.out

code/a6_automatic_artifact_correction/logs/eegmp_art_23.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-023
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 995 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 137 from 1200preprocessing trial 284 from 1200preprocessing trial 429 from 1200preprocessing trial 574 from 1200preprocessing trial 723 from 1200preprocessing trial 872 from 1200preprocessing trial 1018 from 1200preprocessing trial 1157 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1019 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 148.928021
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1001 MB
+removing 18 components
+keeping 53 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 130 from 1200processing trial 269 from 1200processing trial 431 from 1200processing trial 594 from 1200processing trial 758 from 1200processing trial 922 from 1200processing trial 1041 from 1200processing trial 1172 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 5 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 34 from 1200preprocessing trial 71 from 1200preprocessing trial 110 from 1200preprocessing trial 147 from 1200preprocessing trial 186 from 1200preprocessing trial 220 from 1200preprocessing trial 247 from 1200preprocessing trial 282 from 1200preprocessing trial 317 from 1200preprocessing trial 351 from 1200preprocessing trial 384 from 1200preprocessing trial 419 from 1200preprocessing trial 454 from 1200preprocessing trial 489 from 1200preprocessing trial 525 from 1200preprocessing trial 559 from 1200preprocessing trial 596 from 1200preprocessing trial 631 from 1200preprocessing trial 668 from 1200preprocessing trial 703 from 1200preprocessing trial 739 from 1200preprocessing trial 771 from 1200preprocessing trial 801 from 1200preprocessing trial 834 from 1200preprocessing trial 870 from 1200preprocessing trial 907 from 1200preprocessing trial 942 from 1200preprocessing trial 978 from 1200preprocessing trial 1007 from 1200preprocessing trial 1026 from 1200preprocessing trial 1052 from 1200preprocessing trial 1077 from 1200preprocessing trial 1105 from 1200preprocessing trial 1140 from 1200preprocessing trial 1176 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_24.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/zW/Q5/MD5E-s7727--2d8aedad3f750e83c509304bcd069b47.out/MD5E-s7727--2d8aedad3f750e83c509304bcd069b47.out

code/a6_automatic_artifact_correction/logs/eegmp_art_24.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-024
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 990 MB
+preprocessing
+preprocessing trial 2 from 1200preprocessing trial 104 from 1200preprocessing trial 252 from 1200preprocessing trial 399 from 1200preprocessing trial 547 from 1200preprocessing trial 699 from 1200preprocessing trial 855 from 1200preprocessing trial 1008 from 1200preprocessing trial 1149 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 3 MB
+baseline correcting data 
+scaling data with 1 over 122.901321
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1007 MB
+removing 10 components
+keeping 61 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 137 from 1200processing trial 298 from 1200processing trial 462 from 1200processing trial 629 from 1200processing trial 797 from 1200processing trial 956 from 1200processing trial 1064 from 1200processing trial 1198 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 12 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 71 from 1200preprocessing trial 109 from 1200preprocessing trial 145 from 1200preprocessing trial 183 from 1200preprocessing trial 220 from 1200preprocessing trial 258 from 1200preprocessing trial 295 from 1200preprocessing trial 334 from 1200preprocessing trial 368 from 1200preprocessing trial 403 from 1200preprocessing trial 438 from 1200preprocessing trial 472 from 1200preprocessing trial 509 from 1200preprocessing trial 546 from 1200preprocessing trial 583 from 1200preprocessing trial 620 from 1200preprocessing trial 657 from 1200preprocessing trial 687 from 1200preprocessing trial 724 from 1200preprocessing trial 761 from 1200preprocessing trial 802 from 1200preprocessing trial 842 from 1200preprocessing trial 880 from 1200preprocessing trial 917 from 1200preprocessing trial 951 from 1200preprocessing trial 987 from 1200preprocessing trial 1015 from 1200preprocessing trial 1037 from 1200preprocessing trial 1060 from 1200preprocessing trial 1085 from 1200preprocessing trial 1113 from 1200preprocessing trial 1149 from 1200preprocessing trial 1185 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 0 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_25.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/f9/8k/MD5E-s7527--008796c9176aa810f2ac4326f3892e82.out/MD5E-s7527--008796c9176aa810f2ac4326f3892e82.out

code/a6_automatic_artifact_correction/logs/eegmp_art_25.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-025
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 990 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 134 from 1200preprocessing trial 278 from 1200preprocessing trial 429 from 1200preprocessing trial 576 from 1200preprocessing trial 722 from 1200preprocessing trial 860 from 1200preprocessing trial 1004 from 1200preprocessing trial 1139 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1014 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 165.334230
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 990 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 154 from 1200processing trial 318 from 1200processing trial 491 from 1200processing trial 658 from 1200processing trial 802 from 1200processing trial 940 from 1200processing trial 1049 from 1200processing trial 1189 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 41 MB
+preprocessing
+preprocessing trial 23 from 1200preprocessing trial 64 from 1200preprocessing trial 103 from 1200preprocessing trial 141 from 1200preprocessing trial 182 from 1200preprocessing trial 221 from 1200preprocessing trial 262 from 1200preprocessing trial 300 from 1200preprocessing trial 341 from 1200preprocessing trial 382 from 1200preprocessing trial 423 from 1200preprocessing trial 462 from 1200preprocessing trial 500 from 1200preprocessing trial 540 from 1200preprocessing trial 579 from 1200preprocessing trial 617 from 1200preprocessing trial 656 from 1200preprocessing trial 694 from 1200preprocessing trial 733 from 1200preprocessing trial 773 from 1200preprocessing trial 812 from 1200preprocessing trial 853 from 1200preprocessing trial 891 from 1200preprocessing trial 931 from 1200preprocessing trial 971 from 1200preprocessing trial 1005 from 1200preprocessing trial 1033 from 1200preprocessing trial 1064 from 1200preprocessing trial 1088 from 1200preprocessing trial 1125 from 1200preprocessing trial 1162 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 41 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_26.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/gF/1Z/MD5E-s7726--fd23775c67b067f25b2e736f6169772c.out/MD5E-s7726--fd23775c67b067f25b2e736f6169772c.out

code/a6_automatic_artifact_correction/logs/eegmp_art_26.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-026
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 2 from 1200preprocessing trial 102 from 1200preprocessing trial 238 from 1200preprocessing trial 383 from 1200preprocessing trial 526 from 1200preprocessing trial 672 from 1200preprocessing trial 813 from 1200preprocessing trial 954 from 1200preprocessing trial 1086 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1007 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 130.560302
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1005 MB
+removing 12 components
+keeping 59 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 132 from 1200processing trial 293 from 1200processing trial 456 from 1200processing trial 617 from 1200processing trial 753 from 1200processing trial 882 from 1200processing trial 1007 from 1200processing trial 1106 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 43 MB
+preprocessing
+preprocessing trial 29 from 1200preprocessing trial 63 from 1200preprocessing trial 101 from 1200preprocessing trial 138 from 1200preprocessing trial 174 from 1200preprocessing trial 211 from 1200preprocessing trial 248 from 1200preprocessing trial 283 from 1200preprocessing trial 320 from 1200preprocessing trial 358 from 1200preprocessing trial 396 from 1200preprocessing trial 434 from 1200preprocessing trial 469 from 1200preprocessing trial 503 from 1200preprocessing trial 540 from 1200preprocessing trial 579 from 1200preprocessing trial 614 from 1200preprocessing trial 653 from 1200preprocessing trial 689 from 1200preprocessing trial 726 from 1200preprocessing trial 760 from 1200preprocessing trial 794 from 1200preprocessing trial 831 from 1200preprocessing trial 869 from 1200preprocessing trial 907 from 1200preprocessing trial 945 from 1200preprocessing trial 984 from 1200preprocessing trial 1012 from 1200preprocessing trial 1037 from 1200preprocessing trial 1062 from 1200preprocessing trial 1090 from 1200preprocessing trial 1125 from 1200preprocessing trial 1161 from 1200preprocessing trial 1196 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 43 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_27.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/vJ/xv/MD5E-s7666--85322bc3bd344aa5d21fb3af0dff5317.out/MD5E-s7666--85322bc3bd344aa5d21fb3af0dff5317.out

code/a6_automatic_artifact_correction/logs/eegmp_art_27.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-027
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 993 MB
+preprocessing
+preprocessing trial 5 from 1200preprocessing trial 106 from 1200preprocessing trial 253 from 1200preprocessing trial 409 from 1200preprocessing trial 559 from 1200preprocessing trial 704 from 1200preprocessing trial 853 from 1200preprocessing trial 1007 from 1200preprocessing trial 1152 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1016 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 169.635712
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1009 MB
+removing 22 components
+keeping 49 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 153 from 1200processing trial 318 from 1200processing trial 485 from 1200processing trial 646 from 1200processing trial 815 from 1200processing trial 979 from 1200processing trial 1090 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 43 MB
+preprocessing
+preprocessing trial 34 from 1200preprocessing trial 74 from 1200preprocessing trial 113 from 1200preprocessing trial 151 from 1200preprocessing trial 189 from 1200preprocessing trial 226 from 1200preprocessing trial 262 from 1200preprocessing trial 301 from 1200preprocessing trial 336 from 1200preprocessing trial 374 from 1200preprocessing trial 410 from 1200preprocessing trial 446 from 1200preprocessing trial 483 from 1200preprocessing trial 518 from 1200preprocessing trial 555 from 1200preprocessing trial 591 from 1200preprocessing trial 627 from 1200preprocessing trial 662 from 1200preprocessing trial 693 from 1200preprocessing trial 727 from 1200preprocessing trial 763 from 1200preprocessing trial 799 from 1200preprocessing trial 835 from 1200preprocessing trial 871 from 1200preprocessing trial 908 from 1200preprocessing trial 944 from 1200preprocessing trial 981 from 1200preprocessing trial 1008 from 1200preprocessing trial 1032 from 1200preprocessing trial 1055 from 1200preprocessing trial 1077 from 1200preprocessing trial 1106 from 1200preprocessing trial 1144 from 1200preprocessing trial 1182 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 44 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_28.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/WV/Z5/MD5E-s7665--445f926ae88a37360ee6ac1045828f3d.out/MD5E-s7665--445f926ae88a37360ee6ac1045828f3d.out

code/a6_automatic_artifact_correction/logs/eegmp_art_28.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-028
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 990 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 138 from 1200preprocessing trial 286 from 1200preprocessing trial 434 from 1200preprocessing trial 584 from 1200preprocessing trial 734 from 1200preprocessing trial 884 from 1200preprocessing trial 1028 from 1200preprocessing trial 1174 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 193.457545
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1001 MB
+removing 22 components
+keeping 49 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 150 from 1200processing trial 314 from 1200processing trial 481 from 1200processing trial 647 from 1200processing trial 814 from 1200processing trial 981 from 1200processing trial 1090 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 2 seconds and required the additional allocation of an estimated 3 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 32 from 1200preprocessing trial 68 from 1200preprocessing trial 104 from 1200preprocessing trial 133 from 1200preprocessing trial 168 from 1200preprocessing trial 204 from 1200preprocessing trial 242 from 1200preprocessing trial 281 from 1200preprocessing trial 321 from 1200preprocessing trial 360 from 1200preprocessing trial 398 from 1200preprocessing trial 436 from 1200preprocessing trial 472 from 1200preprocessing trial 509 from 1200preprocessing trial 546 from 1200preprocessing trial 583 from 1200preprocessing trial 621 from 1200preprocessing trial 659 from 1200preprocessing trial 696 from 1200preprocessing trial 735 from 1200preprocessing trial 774 from 1200preprocessing trial 811 from 1200preprocessing trial 848 from 1200preprocessing trial 885 from 1200preprocessing trial 918 from 1200preprocessing trial 954 from 1200preprocessing trial 989 from 1200preprocessing trial 1015 from 1200preprocessing trial 1039 from 1200preprocessing trial 1064 from 1200preprocessing trial 1087 from 1200preprocessing trial 1115 from 1200preprocessing trial 1151 from 1200preprocessing trial 1188 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 37 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_29.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/gJ/Kf/MD5E-s7596--e859b3e3144473c4c36316e4b8260dc2.out/MD5E-s7596--e859b3e3144473c4c36316e4b8260dc2.out

code/a6_automatic_artifact_correction/logs/eegmp_art_29.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-029
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 987 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 140 from 1200preprocessing trial 277 from 1200preprocessing trial 420 from 1200preprocessing trial 557 from 1200preprocessing trial 696 from 1200preprocessing trial 836 from 1200preprocessing trial 989 from 1200preprocessing trial 1078 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1012 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 187.320354
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1002 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 142 from 1200processing trial 302 from 1200processing trial 462 from 1200processing trial 622 from 1200processing trial 783 from 1200processing trial 944 from 1200processing trial 1074 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 32 from 1200preprocessing trial 71 from 1200preprocessing trial 110 from 1200preprocessing trial 149 from 1200preprocessing trial 182 from 1200preprocessing trial 219 from 1200preprocessing trial 257 from 1200preprocessing trial 297 from 1200preprocessing trial 334 from 1200preprocessing trial 371 from 1200preprocessing trial 408 from 1200preprocessing trial 446 from 1200preprocessing trial 484 from 1200preprocessing trial 522 from 1200preprocessing trial 560 from 1200preprocessing trial 598 from 1200preprocessing trial 635 from 1200preprocessing trial 673 from 1200preprocessing trial 710 from 1200preprocessing trial 750 from 1200preprocessing trial 782 from 1200preprocessing trial 821 from 1200preprocessing trial 861 from 1200preprocessing trial 901 from 1200preprocessing trial 938 from 1200preprocessing trial 974 from 1200preprocessing trial 1008 from 1200preprocessing trial 1038 from 1200preprocessing trial 1063 from 1200preprocessing trial 1090 from 1200preprocessing trial 1117 from 1200preprocessing trial 1156 from 1200preprocessing trial 1196 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_3.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/p9/Q7/MD5E-s7857--07f05d5b69ab94dc8a1945234360712c.out/MD5E-s7857--07f05d5b69ab94dc8a1945234360712c.out

code/a6_automatic_artifact_correction/logs/eegmp_art_3.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-003
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 990 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 137 from 1200preprocessing trial 281 from 1200preprocessing trial 427 from 1200preprocessing trial 566 from 1200preprocessing trial 709 from 1200preprocessing trial 847 from 1200preprocessing trial 987 from 1200preprocessing trial 1087 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1015 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 103.109485
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1000 MB
+removing 9 components
+keeping 62 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 130 from 1200processing trial 289 from 1200processing trial 448 from 1200processing trial 610 from 1200processing trial 771 from 1200processing trial 902 from 1200processing trial 1029 from 1200processing trial 1133 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 3 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 37 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 71 from 1200preprocessing trial 107 from 1200preprocessing trial 139 from 1200preprocessing trial 175 from 1200preprocessing trial 212 from 1200preprocessing trial 248 from 1200preprocessing trial 283 from 1200preprocessing trial 318 from 1200preprocessing trial 352 from 1200preprocessing trial 386 from 1200preprocessing trial 420 from 1200preprocessing trial 455 from 1200preprocessing trial 490 from 1200preprocessing trial 524 from 1200preprocessing trial 556 from 1200preprocessing trial 589 from 1200preprocessing trial 621 from 1200preprocessing trial 656 from 1200preprocessing trial 690 from 1200preprocessing trial 724 from 1200preprocessing trial 757 from 1200preprocessing trial 789 from 1200preprocessing trial 820 from 1200preprocessing trial 854 from 1200preprocessing trial 889 from 1200preprocessing trial 923 from 1200preprocessing trial 958 from 1200preprocessing trial 993 from 1200preprocessing trial 1017 from 1200preprocessing trial 1042 from 1200preprocessing trial 1066 from 1200preprocessing trial 1091 from 1200preprocessing trial 1121 from 1200preprocessing trial 1155 from 1200preprocessing trial 1190 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 38 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_30.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/vQ/G3/MD5E-s7594--f2a4fa8b2841d4600498ceba758dcd9c.out/MD5E-s7594--f2a4fa8b2841d4600498ceba758dcd9c.out

code/a6_automatic_artifact_correction/logs/eegmp_art_30.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-030
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 987 MB
+preprocessing
+preprocessing trial 2 from 1200preprocessing trial 103 from 1200preprocessing trial 249 from 1200preprocessing trial 403 from 1200preprocessing trial 549 from 1200preprocessing trial 683 from 1200preprocessing trial 814 from 1200preprocessing trial 947 from 1200preprocessing trial 1048 from 1200preprocessing trial 1158 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1011 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 174.588181
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1007 MB
+removing 15 components
+keeping 56 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 145 from 1200processing trial 308 from 1200processing trial 472 from 1200processing trial 636 from 1200processing trial 800 from 1200processing trial 963 from 1200processing trial 1061 from 1200processing trial 1198 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 51 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 73 from 1200preprocessing trial 110 from 1200preprocessing trial 150 from 1200preprocessing trial 189 from 1200preprocessing trial 227 from 1200preprocessing trial 268 from 1200preprocessing trial 308 from 1200preprocessing trial 346 from 1200preprocessing trial 384 from 1200preprocessing trial 420 from 1200preprocessing trial 457 from 1200preprocessing trial 494 from 1200preprocessing trial 531 from 1200preprocessing trial 570 from 1200preprocessing trial 609 from 1200preprocessing trial 649 from 1200preprocessing trial 690 from 1200preprocessing trial 726 from 1200preprocessing trial 768 from 1200preprocessing trial 806 from 1200preprocessing trial 844 from 1200preprocessing trial 883 from 1200preprocessing trial 922 from 1200preprocessing trial 961 from 1200preprocessing trial 1001 from 1200preprocessing trial 1035 from 1200preprocessing trial 1069 from 1200preprocessing trial 1099 from 1200preprocessing trial 1133 from 1200preprocessing trial 1172 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 39 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_31.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/wz/55/MD5E-s6741--1fa4eb52ecbc1c8c88368255ed8fb326.out/MD5E-s6741--1fa4eb52ecbc1c8c88368255ed8fb326.out

code/a6_automatic_artifact_correction/logs/eegmp_art_31.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-031
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 195 from 1200preprocessing trial 405 from 1200preprocessing trial 617 from 1200preprocessing trial 831 from 1200preprocessing trial 1041 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 171.792561
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 988 MB
+removing 18 components
+keeping 53 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 189 from 1200processing trial 392 from 1200processing trial 600 from 1200processing trial 808 from 1200processing trial 1010 from 1200processing trial 1161 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 2 seconds and required the additional allocation of an estimated 9 MB
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 45 from 1200preprocessing trial 96 from 1200preprocessing trial 149 from 1200preprocessing trial 202 from 1200preprocessing trial 254 from 1200preprocessing trial 308 from 1200preprocessing trial 362 from 1200preprocessing trial 414 from 1200preprocessing trial 466 from 1200preprocessing trial 520 from 1200preprocessing trial 573 from 1200preprocessing trial 627 from 1200preprocessing trial 681 from 1200preprocessing trial 735 from 1200preprocessing trial 787 from 1200preprocessing trial 839 from 1200preprocessing trial 892 from 1200preprocessing trial 946 from 1200preprocessing trial 994 from 1200preprocessing trial 1024 from 1200preprocessing trial 1051 from 1200preprocessing trial 1079 from 1200preprocessing trial 1121 from 1200preprocessing trial 1162 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_32.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/qg/6X/MD5E-s6681--bc2af5c9918a742136adf43f0f218747.out/MD5E-s6681--bc2af5c9918a742136adf43f0f218747.out

code/a6_automatic_artifact_correction/logs/eegmp_art_32.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-032
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 991 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 203 from 1200preprocessing trial 409 from 1200preprocessing trial 612 from 1200preprocessing trial 818 from 1200preprocessing trial 1035 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1014 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 236.318183
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 3 seconds and required the additional allocation of an estimated 1023 MB
+removing 9 components
+keeping 62 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 163 from 1200processing trial 374 from 1200processing trial 591 from 1200processing trial 807 from 1200processing trial 1015 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 2 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 45 from 1200preprocessing trial 99 from 1200preprocessing trial 150 from 1200preprocessing trial 205 from 1200preprocessing trial 260 from 1200preprocessing trial 316 from 1200preprocessing trial 370 from 1200preprocessing trial 422 from 1200preprocessing trial 476 from 1200preprocessing trial 529 from 1200preprocessing trial 584 from 1200preprocessing trial 635 from 1200preprocessing trial 689 from 1200preprocessing trial 745 from 1200preprocessing trial 801 from 1200preprocessing trial 857 from 1200preprocessing trial 912 from 1200preprocessing trial 967 from 1200preprocessing trial 1011 from 1200preprocessing trial 1038 from 1200preprocessing trial 1061 from 1200preprocessing trial 1089 from 1200preprocessing trial 1119 from 1200preprocessing trial 1167 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 3 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_33.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/XQ/wV/MD5E-s998593--f6878c4db0394b8ba2df6a56abfda8a9.out/MD5E-s998593--f6878c4db0394b8ba2df6a56abfda8a9.out

code/a6_automatic_artifact_correction/logs/eegmp_art_4.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/8Q/3f/MD5E-s7659--a5b073124b66f9b590540b4decaf2a3f.out/MD5E-s7659--a5b073124b66f9b590540b4decaf2a3f.out

code/a6_automatic_artifact_correction/logs/eegmp_art_4.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-004
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 987 MB
+preprocessing
+preprocessing trial 3 from 1200preprocessing trial 107 from 1200preprocessing trial 245 from 1200preprocessing trial 394 from 1200preprocessing trial 547 from 1200preprocessing trial 700 from 1200preprocessing trial 849 from 1200preprocessing trial 995 from 1200preprocessing trial 1138 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1011 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 2 MB
+baseline correcting data 
+scaling data with 1 over 546.826045
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 995 MB
+removing 10 components
+keeping 61 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 142 from 1200processing trial 305 from 1200processing trial 469 from 1200processing trial 632 from 1200processing trial 796 from 1200processing trial 958 from 1200processing trial 1080 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 5 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 32 from 1200preprocessing trial 61 from 1200preprocessing trial 96 from 1200preprocessing trial 129 from 1200preprocessing trial 164 from 1200preprocessing trial 202 from 1200preprocessing trial 239 from 1200preprocessing trial 276 from 1200preprocessing trial 315 from 1200preprocessing trial 354 from 1200preprocessing trial 393 from 1200preprocessing trial 426 from 1200preprocessing trial 461 from 1200preprocessing trial 500 from 1200preprocessing trial 537 from 1200preprocessing trial 574 from 1200preprocessing trial 610 from 1200preprocessing trial 646 from 1200preprocessing trial 683 from 1200preprocessing trial 719 from 1200preprocessing trial 757 from 1200preprocessing trial 790 from 1200preprocessing trial 826 from 1200preprocessing trial 862 from 1200preprocessing trial 900 from 1200preprocessing trial 939 from 1200preprocessing trial 974 from 1200preprocessing trial 1006 from 1200preprocessing trial 1031 from 1200preprocessing trial 1055 from 1200preprocessing trial 1082 from 1200preprocessing trial 1108 from 1200preprocessing trial 1143 from 1200preprocessing trial 1183 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_5.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/mv/2X/MD5E-s7664--b986c08c7ae0837ae4881a8c118bbf5e.out/MD5E-s7664--b986c08c7ae0837ae4881a8c118bbf5e.out

code/a6_automatic_artifact_correction/logs/eegmp_art_5.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-005
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 991 MB
+preprocessing
+preprocessing trial 3 from 1200preprocessing trial 108 from 1200preprocessing trial 250 from 1200preprocessing trial 404 from 1200preprocessing trial 541 from 1200preprocessing trial 670 from 1200preprocessing trial 797 from 1200preprocessing trial 925 from 1200preprocessing trial 1054 from 1200preprocessing trial 1199 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1020 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 113.690478
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 995 MB
+removing 9 components
+keeping 62 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 141 from 1200processing trial 304 from 1200processing trial 467 from 1200processing trial 630 from 1200processing trial 794 from 1200processing trial 957 from 1200processing trial 1088 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 42 MB
+preprocessing
+preprocessing trial 32 from 1200preprocessing trial 69 from 1200preprocessing trial 106 from 1200preprocessing trial 143 from 1200preprocessing trial 178 from 1200preprocessing trial 217 from 1200preprocessing trial 252 from 1200preprocessing trial 291 from 1200preprocessing trial 328 from 1200preprocessing trial 365 from 1200preprocessing trial 403 from 1200preprocessing trial 440 from 1200preprocessing trial 478 from 1200preprocessing trial 515 from 1200preprocessing trial 553 from 1200preprocessing trial 591 from 1200preprocessing trial 630 from 1200preprocessing trial 668 from 1200preprocessing trial 707 from 1200preprocessing trial 745 from 1200preprocessing trial 785 from 1200preprocessing trial 824 from 1200preprocessing trial 862 from 1200preprocessing trial 894 from 1200preprocessing trial 931 from 1200preprocessing trial 966 from 1200preprocessing trial 1003 from 1200preprocessing trial 1030 from 1200preprocessing trial 1058 from 1200preprocessing trial 1080 from 1200preprocessing trial 1110 from 1200preprocessing trial 1149 from 1200preprocessing trial 1189 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 43 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_6.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/FJ/45/MD5E-s7659--820ab320b98744946c7b679fb561d69c.out/MD5E-s7659--820ab320b98744946c7b679fb561d69c.out

code/a6_automatic_artifact_correction/logs/eegmp_art_6.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-006
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 137 from 1200preprocessing trial 283 from 1200preprocessing trial 434 from 1200preprocessing trial 584 from 1200preprocessing trial 724 from 1200preprocessing trial 855 from 1200preprocessing trial 986 from 1200preprocessing trial 1124 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1016 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 75.821936
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1009 MB
+removing 11 components
+keeping 60 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 131 from 1200processing trial 295 from 1200processing trial 457 from 1200processing trial 619 from 1200processing trial 780 from 1200processing trial 941 from 1200processing trial 1059 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 0 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 44 MB
+preprocessing
+preprocessing trial 33 from 1200preprocessing trial 68 from 1200preprocessing trial 99 from 1200preprocessing trial 131 from 1200preprocessing trial 162 from 1200preprocessing trial 198 from 1200preprocessing trial 235 from 1200preprocessing trial 271 from 1200preprocessing trial 305 from 1200preprocessing trial 341 from 1200preprocessing trial 376 from 1200preprocessing trial 412 from 1200preprocessing trial 450 from 1200preprocessing trial 488 from 1200preprocessing trial 523 from 1200preprocessing trial 560 from 1200preprocessing trial 595 from 1200preprocessing trial 629 from 1200preprocessing trial 662 from 1200preprocessing trial 699 from 1200preprocessing trial 735 from 1200preprocessing trial 772 from 1200preprocessing trial 809 from 1200preprocessing trial 845 from 1200preprocessing trial 883 from 1200preprocessing trial 920 from 1200preprocessing trial 957 from 1200preprocessing trial 995 from 1200preprocessing trial 1016 from 1200preprocessing trial 1041 from 1200preprocessing trial 1070 from 1200preprocessing trial 1097 from 1200preprocessing trial 1132 from 1200preprocessing trial 1170 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 45 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_7.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/mQ/FZ/MD5E-s7727--fe28f5e93153a5172ec7f3497b22f355.out/MD5E-s7727--fe28f5e93153a5172ec7f3497b22f355.out

code/a6_automatic_artifact_correction/logs/eegmp_art_7.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-007
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 987 MB
+preprocessing
+preprocessing trial 6 from 1200preprocessing trial 137 from 1200preprocessing trial 288 from 1200preprocessing trial 443 from 1200preprocessing trial 596 from 1200preprocessing trial 748 from 1200preprocessing trial 900 from 1200preprocessing trial 1047 from 1200preprocessing trial 1190 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1010 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 68.528471
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 1006 MB
+removing 7 components
+keeping 64 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 3 MB
+processing trials
+processing trial 146 from 1200processing trial 309 from 1200processing trial 473 from 1200processing trial 637 from 1200processing trial 790 from 1200processing trial 922 from 1200processing trial 1034 from 1200processing trial 1153 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 14 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 46 MB
+preprocessing
+preprocessing trial 31 from 1200preprocessing trial 66 from 1200preprocessing trial 103 from 1200preprocessing trial 138 from 1200preprocessing trial 175 from 1200preprocessing trial 211 from 1200preprocessing trial 248 from 1200preprocessing trial 286 from 1200preprocessing trial 323 from 1200preprocessing trial 361 from 1200preprocessing trial 400 from 1200preprocessing trial 437 from 1200preprocessing trial 471 from 1200preprocessing trial 504 from 1200preprocessing trial 538 from 1200preprocessing trial 573 from 1200preprocessing trial 607 from 1200preprocessing trial 642 from 1200preprocessing trial 678 from 1200preprocessing trial 714 from 1200preprocessing trial 750 from 1200preprocessing trial 786 from 1200preprocessing trial 824 from 1200preprocessing trial 862 from 1200preprocessing trial 898 from 1200preprocessing trial 936 from 1200preprocessing trial 972 from 1200preprocessing trial 1005 from 1200preprocessing trial 1024 from 1200preprocessing trial 1043 from 1200preprocessing trial 1068 from 1200preprocessing trial 1099 from 1200preprocessing trial 1137 from 1200preprocessing trial 1174 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 46 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_8.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/wG/Vf/MD5E-s7859--ebb0925c9a47c7127dc787fec1de7132.out/MD5E-s7859--ebb0925c9a47c7127dc787fec1de7132.out

code/a6_automatic_artifact_correction/logs/eegmp_art_8.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-008
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 2 seconds and required the additional allocation of an estimated 988 MB
+preprocessing
+preprocessing trial 3 from 1200preprocessing trial 102 from 1200preprocessing trial 244 from 1200preprocessing trial 370 from 1200preprocessing trial 453 from 1200preprocessing trial 510 from 1200preprocessing trial 571 from 1200preprocessing trial 640 from 1200preprocessing trial 712 from 1200preprocessing trial 788 from 1200preprocessing trial 880 from 1200preprocessing trial 958 from 1200preprocessing trial 1063 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 101.977170
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 998 MB
+removing 7 components
+keeping 64 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 155 from 1200processing trial 324 from 1200processing trial 492 from 1200processing trial 662 from 1200processing trial 825 from 1200processing trial 963 from 1200processing trial 1076 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 34 from 1200preprocessing trial 74 from 1200preprocessing trial 113 from 1200preprocessing trial 152 from 1200preprocessing trial 190 from 1200preprocessing trial 231 from 1200preprocessing trial 265 from 1200preprocessing trial 307 from 1200preprocessing trial 346 from 1200preprocessing trial 387 from 1200preprocessing trial 419 from 1200preprocessing trial 458 from 1200preprocessing trial 497 from 1200preprocessing trial 537 from 1200preprocessing trial 575 from 1200preprocessing trial 611 from 1200preprocessing trial 649 from 1200preprocessing trial 686 from 1200preprocessing trial 723 from 1200preprocessing trial 759 from 1200preprocessing trial 797 from 1200preprocessing trial 837 from 1200preprocessing trial 878 from 1200preprocessing trial 917 from 1200preprocessing trial 955 from 1200preprocessing trial 990 from 1200preprocessing trial 1017 from 1200preprocessing trial 1041 from 1200preprocessing trial 1060 from 1200preprocessing trial 1082 from 1200preprocessing trial 1114 from 1200preprocessing trial 1147 from 1200preprocessing trial 1183 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 37 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a6_automatic_artifact_correction/logs/eegmp_art_9.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/qG/kv/MD5E-s7659--0e1e450228313f14a703c11c18d3118e.out/MD5E-s7659--0e1e450228313f14a703c11c18d3118e.out

code/a6_automatic_artifact_correction/logs/eegmp_art_9.out

@@ -0,0 +1,110 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-009
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/private/fixsampleinfo.m' at line 100
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 148
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a6_aut0/mnt/beegfs/home/kosciessa/EEGManyPipelines/eegmp_preproc/tools/fieldtrip/ft_preprocessing.m' at line 288
+
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 989 MB
+preprocessing
+preprocessing trial 4 from 1200preprocessing trial 105 from 1200preprocessing trial 236 from 1200preprocessing trial 373 from 1200preprocessing trial 507 from 1200preprocessing trial 640 from 1200preprocessing trial 778 from 1200preprocessing trial 925 from 1200preprocessing trial 1069 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 3 seconds and required the additional allocation of an estimated 1013 MB
+the input is raw data with 71 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+           hdr: [1x1 struct]
+       fsample: 500
+    sampleinfo: [1200x2 double]
+         trial: {1x1200 cell}
+          time: {1x1200 cell}
+         label: {71x1 cell}
+           cfg: [1x1 struct]
+          elec: [1x1 struct]
+      chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+baseline correcting data 
+scaling data with 1 over 108.338413
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 4 seconds and required the additional allocation of an estimated 999 MB
+removing 10 components
+keeping 61 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 144 from 1200processing trial 299 from 1200processing trial 456 from 1200processing trial 612 from 1200processing trial 764 from 1200processing trial 920 from 1200processing trial 1050 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 31 from 1200preprocessing trial 66 from 1200preprocessing trial 103 from 1200preprocessing trial 139 from 1200preprocessing trial 173 from 1200preprocessing trial 210 from 1200preprocessing trial 247 from 1200preprocessing trial 280 from 1200preprocessing trial 312 from 1200preprocessing trial 348 from 1200preprocessing trial 384 from 1200preprocessing trial 418 from 1200preprocessing trial 453 from 1200preprocessing trial 488 from 1200preprocessing trial 524 from 1200preprocessing trial 557 from 1200preprocessing trial 593 from 1200preprocessing trial 631 from 1200preprocessing trial 667 from 1200preprocessing trial 704 from 1200preprocessing trial 742 from 1200preprocessing trial 780 from 1200preprocessing trial 818 from 1200preprocessing trial 856 from 1200preprocessing trial 889 from 1200preprocessing trial 923 from 1200preprocessing trial 960 from 1200preprocessing trial 998 from 1200preprocessing trial 1023 from 1200preprocessing trial 1050 from 1200preprocessing trial 1075 from 1200preprocessing trial 1105 from 1200preprocessing trial 1144 from 1200preprocessing trial 1180 from 1200preprocessing trial 1200 from 1200
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+Error using fprintf
+Invalid file identifier. Use fopen to generate a valid file identifier.
+
+Error in a6_automatic_artifact_correction (line 108)
+
+MATLAB:FileIO:InvalidFid

code/a7_prep_data_for_analysis/a7_prep_data_for_analysis.m

@@ -1 +0,0 @@
-../../.git/annex/objects/z5/25/MD5E-s4777--7dd148a073a07dba2bcc98cd27124aea.m/MD5E-s4777--7dd148a073a07dba2bcc98cd27124aea.m

code/a7_prep_data_for_analysis/a7_prep_data_for_analysis.m

@@ -0,0 +1,176 @@
+function a7_prep_data_for_analysis(id, rootpath)
+
+if ismac % run if function is not pre-compiled
+    id = '11'; % test for example subject
+    currentFile = mfilename('fullpath');
+    [pathstr,~,~] = fileparts(currentFile);
+    cd(fullfile(pathstr,'..', '..'))
+    rootpath = pwd;
+end
+
+% inputs
+pn.eeg_BIDS = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'eeg_BIDS');
+pn.channel_locations = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'channel_locations');
+pn.events = fullfile(rootpath, 'data', 'inputs', 'rawdata', 'events');
+pn.tools = fullfile(rootpath, 'tools');
+% outputs
+pn.eeg_ft = fullfile(rootpath, 'data', 'outputs', 'eeg');
+pn.history = fullfile(rootpath, 'data', 'outputs', 'history');
+
+if ismac % run if function is not pre-compiled
+     addpath(fullfile(pn.tools, 'fieldtrip')); ft_defaults;
+     addpath(fullfile(pn.tools, 'helpers'));
+end
+
+% N = 33
+IDs = tdfread(fullfile(pn.eeg_BIDS, 'participants.tsv'));
+IDs = cellstr(IDs.participant_id);
+
+id = str2num(id);
+
+display(['processing ID ' num2str(IDs{id})]);
+
+%% load files
+
+% load data
+load(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_seg.mat']),'data_eeg', 'events');
+
+data_ica = load(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_ica.mat']),'data');
+data = data_eeg; clear data_eeg;
+data.elec = data_ica.data.elec;
+data.chanlocs = data_ica.data.chanlocs; clear data_ica;
+
+% load config
+load(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+% cache original number of trials
+Ntrial = numel(data.trial);
+
+%% define parameter
+
+% ICs to reject
+iclabels    = config.ica1.iclabels.manual;
+ics2reject = [iclabels.bli(:); iclabels.mov(:); iclabels.hrt(:); iclabels.ref(:); iclabels.art(:); iclabels.emg(:)];
+clear iclabels
+
+% trials to remove
+trls2remove = config.ArtDect.trials;
+
+% channels to interpolate
+chns2interp = config.ArtDect.channels;
+
+%% ICA (from weights)
+
+% ica config
+cfg.method           = 'runica';
+cfg.channel          = {'all'};
+cfg.trials           = 'all';
+cfg.numcomponent     = 'all';
+cfg.demean           = 'yes';
+cfg.runica.extended  = 1;
+
+% ICA solution
+cfg.unmixing     = config.ica1.unmixing;
+cfg.topolabel    = config.ica1.topolabel;
+
+% components
+comp = ft_componentanalysis(cfg,data);
+
+% clear cfg
+clear cfg data
+
+%% remove components
+
+% cfg for rejecting components (reject: blinks, eye movements, ecg, ref)
+cfg.component = sortrows(ics2reject)';
+cfg.demean    = 'yes';
+
+% reject components
+data = ft_rejectcomponent(cfg,comp);
+
+% clear cfg
+clear cfg comp ics2reject
+
+%% remove trials
+
+% define trials to keep
+trials               = 1:Ntrial;
+trials(trls2remove)  = [];
+
+% config for deleting trials
+cfg.trials   = trials;
+
+% remove trials
+data   = ft_preprocessing(cfg,data);
+nartfree_trials = trials;
+
+config.nartfree_trials = nartfree_trials;
+
+% clear variables
+clear cfg trials trls2remove
+
+%% remove eye & reference channels (before interpolation)
+
+cfg.channel     = {'all','-IO1','-IO2','-M1', '-M2','-VEOG','-HEOG'};
+cfg.demean      = 'yes';
+
+% remove channels
+data = ft_preprocessing(cfg,data);
+
+% clear cfg
+clear cfg
+
+if ~isempty(chns2interp)
+    % interpolation cfg
+    cfg            = [];
+    cfg.method     = 'spline';
+    cfg.badchannel = data.label(chns2interp);
+    cfg.trials     = 'all';
+    cfg.lambda     = 1e-5; 
+    cfg.order      = 4; 
+    cfg.elec       = config.elec;
+
+    % interpolate
+    data = ft_channelrepair(cfg,data);
+
+    % clear cfg
+    clear cfg chns2interp
+end
+
+%% keep channel x trial artifacts  
+
+data.ArtDect.channels_x_trials = config.ArtDect.channels_x_trials;
+
+%% create overview of percentage of excluded trials, update config.trl
+
+tmp_trialNumbers(1,1) = length(data.trial);
+tmp_trialNumbers(2,1) = 1200; % maximum amount of trials
+tmp_trialNumbers(3,1) = (100-((tmp_trialNumbers(1,1)/tmp_trialNumbers(2,1))*100)); % percentage of excluded trials
+config.overview_trial_numbers = tmp_trialNumbers;
+
+%% update config.trl with trigger codes
+
+% add info whether trial is included in final set; 1 = trial containing no artifact
+config.trl(1:Ntrial,4)                 = 0;
+config.trl(nartfree_trials, 4)  = 1;
+% add trial number
+config.trl(1:Ntrial,5) = 0;
+config.trl(nartfree_trials, 5)  = nartfree_trials;
+% load marker file
+mrk = config.mrk;
+for i = 1:size(mrk,2)
+   mrk_val{i,1} = mrk(1,i).value;
+end
+
+% save config
+save(fullfile(pn.history, [IDs{id}, '_task-xxxx_config.mat']),'config');
+
+%% update event table
+
+% remove trials that were not retained during preprocessing
+
+events(config.trl(:,5)==0,:) = [];
+
+%% save data
+data_eeg = data; clear data;
+save(fullfile(pn.eeg_ft, [IDs{id}, '_task-xxxx_eeg_art.mat']),'data_eeg', 'events');

code/a7_prep_data_for_analysis/a7_prep_data_for_analysis_START.sh

@@ -1 +0,0 @@
-../../.git/annex/objects/p7/xV/MD5E-s860--3a0307135d8381820ea4e3aacf391d13.sh/MD5E-s860--3a0307135d8381820ea4e3aacf391d13.sh

code/a7_prep_data_for_analysis/a7_prep_data_for_analysis_START.sh

@@ -0,0 +1,26 @@
+#!/bin/bash
+
+fun_name="a7_prep_data_for_analysis"
+job_name="eegmp_final"
+
+mkdir ./logs
+
+rootpath="$(pwd)/../.."
+rootpath=$(builtin cd $rootpath; pwd)
+
+for subj in $(seq 1 33); do
+	# if not been performed yet
+	if [ ! -f ${rootpath}/data/outputs/eeg/sub-$(printf "%03d" ${subj})*_art.mat ]; then
+		echo "step not performed yet for this subject"
+		echo "#!/bin/bash"                    			> job.slurm
+		echo "#SBATCH --job-name ${job_name}_${subj}" 	>> job.slurm
+		echo "#SBATCH --cpus-per-task 4"				>> job.slurm
+		echo "#SBATCH --mem 8gb" 						>> job.slurm
+		echo "#SBATCH --time 01:00:00" 					>> job.slurm
+		echo "#SBATCH --output ./logs/${job_name}_${subj}.out"			>> job.slurm
+		echo "#SBATCH --workdir ." 										>> job.slurm
+		echo "./${fun_name}_run.sh /opt/matlab/R2016b ${subj} ${rootpath}" 	>> job.slurm
+		sbatch job.slurm
+		rm -f job.slurm
+	fi
+done

code/a7_prep_data_for_analysis/logs/eegmp_final_1.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/9W/Pk/MD5E-s9274--a72b64df9b895632fc5315f541809a4b.out/MD5E-s9274--a72b64df9b895632fc5315f541809a4b.out

code/a7_prep_data_for_analysis/logs/eegmp_final_1.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-001
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 373 MB
+baseline correcting data 
+scaling data with 1 over 121.131884
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1383 MB
+removing 8 components
+keeping 63 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 152 from 1200processing trial 307 from 1200processing trial 473 from 1200processing trial 636 from 1200processing trial 780 from 1200processing trial 907 from 1200processing trial 1021 from 1200processing trial 1122 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 39 MB
+preprocessing
+preprocessing trial 4 from 1081preprocessing trial 109 from 1081preprocessing trial 253 from 1081preprocessing trial 397 from 1081preprocessing trial 538 from 1081preprocessing trial 680 from 1081preprocessing trial 820 from 1081preprocessing trial 963 from 1081preprocessing trial 1058 from 1081preprocessing trial 1081 from 1081
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 40 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 28 from 1081preprocessing trial 61 from 1081preprocessing trial 99 from 1081preprocessing trial 133 from 1081preprocessing trial 169 from 1081preprocessing trial 206 from 1081preprocessing trial 244 from 1081preprocessing trial 281 from 1081preprocessing trial 318 from 1081preprocessing trial 354 from 1081preprocessing trial 390 from 1081preprocessing trial 427 from 1081preprocessing trial 464 from 1081preprocessing trial 497 from 1081preprocessing trial 531 from 1081preprocessing trial 569 from 1081preprocessing trial 605 from 1081preprocessing trial 637 from 1081preprocessing trial 675 from 1081preprocessing trial 708 from 1081preprocessing trial 741 from 1081preprocessing trial 773 from 1081preprocessing trial 807 from 1081preprocessing trial 841 from 1081preprocessing trial 873 from 1081preprocessing trial 909 from 1081preprocessing trial 948 from 1081preprocessing trial 985 from 1081preprocessing trial 1010 from 1081preprocessing trial 1033 from 1081preprocessing trial 1067 from 1081preprocessing trial 1081 from 1081
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+the input is raw data with 66 channels and 1081 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 2 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1081 trials .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_10.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/6X/84/MD5E-s9155--24dc3cd5c77ff49ee49f6b343935f6ac.out/MD5E-s9155--24dc3cd5c77ff49ee49f6b343935f6ac.out

code/a7_prep_data_for_analysis/logs/eegmp_final_10.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-010
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 535 MB
+baseline correcting data 
+scaling data with 1 over 70.834579
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1535 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 143 from 1200processing trial 288 from 1200processing trial 442 from 1200processing trial 598 from 1200processing trial 754 from 1200processing trial 909 from 1200processing trial 1041 from 1200processing trial 1143 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+preprocessing
+preprocessing trial 6 from 1036preprocessing trial 140 from 1036preprocessing trial 283 from 1036preprocessing trial 426 from 1036preprocessing trial 565 from 1036preprocessing trial 705 from 1036preprocessing trial 848 from 1036preprocessing trial 990 from 1036preprocessing trial 1036 from 1036
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 5 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 23 from 1036preprocessing trial 54 from 1036preprocessing trial 87 from 1036preprocessing trial 119 from 1036preprocessing trial 150 from 1036preprocessing trial 182 from 1036preprocessing trial 217 from 1036preprocessing trial 253 from 1036preprocessing trial 289 from 1036preprocessing trial 324 from 1036preprocessing trial 358 from 1036preprocessing trial 391 from 1036preprocessing trial 424 from 1036preprocessing trial 457 from 1036preprocessing trial 491 from 1036preprocessing trial 528 from 1036preprocessing trial 565 from 1036preprocessing trial 599 from 1036preprocessing trial 634 from 1036preprocessing trial 666 from 1036preprocessing trial 698 from 1036preprocessing trial 730 from 1036preprocessing trial 763 from 1036preprocessing trial 795 from 1036preprocessing trial 827 from 1036preprocessing trial 864 from 1036preprocessing trial 898 from 1036preprocessing trial 932 from 1036preprocessing trial 965 from 1036preprocessing trial 999 from 1036preprocessing trial 1020 from 1036preprocessing trial 1036 from 1036
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+the input is raw data with 66 channels and 1036 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 2 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1036 trials ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_11.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/KM/Qv/MD5E-s9368--8aa16d1e0f14aaef9bbd1fd7a9871a69.out/MD5E-s9368--8aa16d1e0f14aaef9bbd1fd7a9871a69.out

code/a7_prep_data_for_analysis/logs/eegmp_final_11.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-011
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 499 MB
+baseline correcting data 
+scaling data with 1 over 66.325346
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1513 MB
+removing 9 components
+keeping 62 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 131 from 1200processing trial 284 from 1200processing trial 444 from 1200processing trial 605 from 1200processing trial 761 from 1200processing trial 922 from 1200processing trial 1048 from 1200processing trial 1142 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 9 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 43 MB
+preprocessing
+preprocessing trial 2 from 1108preprocessing trial 91 from 1108preprocessing trial 229 from 1108preprocessing trial 369 from 1108preprocessing trial 508 from 1108preprocessing trial 648 from 1108preprocessing trial 789 from 1108preprocessing trial 931 from 1108preprocessing trial 1067 from 1108preprocessing trial 1108 from 1108
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 44 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 5 MB
+preprocessing
+preprocessing trial 32 from 1108preprocessing trial 68 from 1108preprocessing trial 105 from 1108preprocessing trial 142 from 1108preprocessing trial 177 from 1108preprocessing trial 214 from 1108preprocessing trial 248 from 1108preprocessing trial 282 from 1108preprocessing trial 316 from 1108preprocessing trial 348 from 1108preprocessing trial 381 from 1108preprocessing trial 415 from 1108preprocessing trial 452 from 1108preprocessing trial 488 from 1108preprocessing trial 523 from 1108preprocessing trial 555 from 1108preprocessing trial 587 from 1108preprocessing trial 623 from 1108preprocessing trial 659 from 1108preprocessing trial 695 from 1108preprocessing trial 728 from 1108preprocessing trial 762 from 1108preprocessing trial 797 from 1108preprocessing trial 833 from 1108preprocessing trial 868 from 1108preprocessing trial 900 from 1108preprocessing trial 932 from 1108preprocessing trial 967 from 1108preprocessing trial 1000 from 1108preprocessing trial 1020 from 1108preprocessing trial 1047 from 1108preprocessing trial 1082 from 1108preprocessing trial 1108 from 1108
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 6 MB
+the input is raw data with 66 channels and 1108 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 2 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1108 trials ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 4 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_12.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/wx/4P/MD5E-s9338--92ce231c29aad67df609363a95352daa.out/MD5E-s9338--92ce231c29aad67df609363a95352daa.out

code/a7_prep_data_for_analysis/logs/eegmp_final_12.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-012
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 434 MB
+baseline correcting data 
+scaling data with 1 over 165.875505
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1443 MB
+removing 17 components
+keeping 54 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 142 from 1200processing trial 288 from 1200processing trial 444 from 1200processing trial 578 from 1200processing trial 704 from 1200processing trial 853 from 1200processing trial 997 from 1200processing trial 1085 from 1200processing trial 1172 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+preprocessing
+preprocessing trial 5 from 1086preprocessing trial 111 from 1086preprocessing trial 223 from 1086preprocessing trial 361 from 1086preprocessing trial 502 from 1086preprocessing trial 640 from 1086preprocessing trial 778 from 1086preprocessing trial 917 from 1086preprocessing trial 1034 from 1086preprocessing trial 1086 from 1086
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 2 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 28 from 1086preprocessing trial 62 from 1086preprocessing trial 95 from 1086preprocessing trial 129 from 1086preprocessing trial 163 from 1086preprocessing trial 197 from 1086preprocessing trial 232 from 1086preprocessing trial 267 from 1086preprocessing trial 298 from 1086preprocessing trial 330 from 1086preprocessing trial 365 from 1086preprocessing trial 402 from 1086preprocessing trial 436 from 1086preprocessing trial 471 from 1086preprocessing trial 506 from 1086preprocessing trial 543 from 1086preprocessing trial 580 from 1086preprocessing trial 617 from 1086preprocessing trial 649 from 1086preprocessing trial 681 from 1086preprocessing trial 717 from 1086preprocessing trial 753 from 1086preprocessing trial 789 from 1086preprocessing trial 824 from 1086preprocessing trial 860 from 1086preprocessing trial 895 from 1086preprocessing trial 933 from 1086preprocessing trial 971 from 1086preprocessing trial 1004 from 1086preprocessing trial 1028 from 1086preprocessing trial 1063 from 1086preprocessing trial 1086 from 1086
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+the input is raw data with 66 channels and 1086 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 1 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1086 trials ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 2 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_13.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/zW/Qx/MD5E-s9274--78a6290c980a67563bb425dc038278b5.out/MD5E-s9274--78a6290c980a67563bb425dc038278b5.out

code/a7_prep_data_for_analysis/logs/eegmp_final_13.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-013
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 494 MB
+baseline correcting data 
+scaling data with 1 over 203.456122
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1497 MB
+removing 12 components
+keeping 59 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 146 from 1200processing trial 292 from 1200processing trial 446 from 1200processing trial 604 from 1200processing trial 761 from 1200processing trial 918 from 1200processing trial 1047 from 1200processing trial 1149 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 45 MB
+preprocessing
+preprocessing trial 6 from 1082preprocessing trial 138 from 1082preprocessing trial 278 from 1082preprocessing trial 419 from 1082preprocessing trial 560 from 1082preprocessing trial 698 from 1082preprocessing trial 838 from 1082preprocessing trial 980 from 1082preprocessing trial 1082 from 1082
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 45 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 23 from 1082preprocessing trial 57 from 1082preprocessing trial 92 from 1082preprocessing trial 124 from 1082preprocessing trial 155 from 1082preprocessing trial 188 from 1082preprocessing trial 224 from 1082preprocessing trial 259 from 1082preprocessing trial 294 from 1082preprocessing trial 330 from 1082preprocessing trial 365 from 1082preprocessing trial 401 from 1082preprocessing trial 435 from 1082preprocessing trial 468 from 1082preprocessing trial 500 from 1082preprocessing trial 534 from 1082preprocessing trial 570 from 1082preprocessing trial 606 from 1082preprocessing trial 639 from 1082preprocessing trial 675 from 1082preprocessing trial 711 from 1082preprocessing trial 747 from 1082preprocessing trial 783 from 1082preprocessing trial 816 from 1082preprocessing trial 848 from 1082preprocessing trial 881 from 1082preprocessing trial 917 from 1082preprocessing trial 953 from 1082preprocessing trial 988 from 1082preprocessing trial 1013 from 1082preprocessing trial 1038 from 1082preprocessing trial 1073 from 1082preprocessing trial 1082 from 1082
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 6 MB
+the input is raw data with 66 channels and 1082 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 3 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1082 trials ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_14.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/8v/8Z/MD5E-s9059--aa1a4d73d87b0fd4c5b0f0d657b2663c.out/MD5E-s9059--aa1a4d73d87b0fd4c5b0f0d657b2663c.out

code/a7_prep_data_for_analysis/logs/eegmp_final_14.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-014
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 562 MB
+baseline correcting data 
+scaling data with 1 over 262.522723
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1564 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 146 from 1200processing trial 292 from 1200processing trial 450 from 1200processing trial 609 from 1200processing trial 744 from 1200processing trial 869 from 1200processing trial 1005 from 1200processing trial 1085 from 1200processing trial 1151 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+preprocessing
+preprocessing trial 6 from 965preprocessing trial 138 from 965preprocessing trial 279 from 965preprocessing trial 420 from 965preprocessing trial 559 from 965preprocessing trial 700 from 965preprocessing trial 842 from 965preprocessing trial 965 from 965
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 32 from 965preprocessing trial 53 from 965preprocessing trial 71 from 965preprocessing trial 87 from 965preprocessing trial 107 from 965preprocessing trial 126 from 965preprocessing trial 142 from 965preprocessing trial 165 from 965preprocessing trial 186 from 965preprocessing trial 211 from 965preprocessing trial 233 from 965preprocessing trial 251 from 965preprocessing trial 283 from 965preprocessing trial 319 from 965preprocessing trial 354 from 965preprocessing trial 388 from 965preprocessing trial 422 from 965preprocessing trial 454 from 965preprocessing trial 486 from 965preprocessing trial 522 from 965preprocessing trial 557 from 965preprocessing trial 591 from 965preprocessing trial 626 from 965preprocessing trial 661 from 965preprocessing trial 696 from 965preprocessing trial 733 from 965preprocessing trial 767 from 965preprocessing trial 799 from 965preprocessing trial 832 from 965preprocessing trial 866 from 965preprocessing trial 899 from 965preprocessing trial 934 from 965preprocessing trial 965 from 965
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+the input is raw data with 66 channels and 965 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 2 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 965 trials .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 2 seconds and required the additional allocation of an estimated 4 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_15.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/jJ/GQ/MD5E-s9123--23054e0fd5ccd792d1f044b3638c8c41.out/MD5E-s9123--23054e0fd5ccd792d1f044b3638c8c41.out

code/a7_prep_data_for_analysis/logs/eegmp_final_15.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-015
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 513 MB
+baseline correcting data 
+scaling data with 1 over 178.474136
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1516 MB
+removing 16 components
+keeping 55 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 122 from 1200processing trial 240 from 1200processing trial 366 from 1200processing trial 493 from 1200processing trial 631 from 1200processing trial 788 from 1200processing trial 945 from 1200processing trial 1060 from 1200processing trial 1154 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 8 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 47 MB
+preprocessing
+preprocessing trial 5 from 1009preprocessing trial 109 from 1009preprocessing trial 248 from 1009preprocessing trial 386 from 1009preprocessing trial 516 from 1009preprocessing trial 647 from 1009preprocessing trial 784 from 1009preprocessing trial 915 from 1009preprocessing trial 1009 from 1009
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 48 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 19 from 1009preprocessing trial 44 from 1009preprocessing trial 75 from 1009preprocessing trial 107 from 1009preprocessing trial 141 from 1009preprocessing trial 177 from 1009preprocessing trial 211 from 1009preprocessing trial 247 from 1009preprocessing trial 280 from 1009preprocessing trial 315 from 1009preprocessing trial 349 from 1009preprocessing trial 384 from 1009preprocessing trial 420 from 1009preprocessing trial 453 from 1009preprocessing trial 484 from 1009preprocessing trial 516 from 1009preprocessing trial 548 from 1009preprocessing trial 579 from 1009preprocessing trial 610 from 1009preprocessing trial 641 from 1009preprocessing trial 673 from 1009preprocessing trial 704 from 1009preprocessing trial 737 from 1009preprocessing trial 771 from 1009preprocessing trial 808 from 1009preprocessing trial 846 from 1009preprocessing trial 884 from 1009preprocessing trial 919 from 1009preprocessing trial 955 from 1009preprocessing trial 992 from 1009preprocessing trial 1009 from 1009
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+the input is raw data with 66 channels and 1009 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 3 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1009 trials .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_16.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/1F/9Q/MD5E-s9231--51830669389d4eb5c3d84f15a09ddefd.out/MD5E-s9231--51830669389d4eb5c3d84f15a09ddefd.out

code/a7_prep_data_for_analysis/logs/eegmp_final_16.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-016
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 551 MB
+baseline correcting data 
+scaling data with 1 over 144.129731
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1557 MB
+removing 11 components
+keeping 60 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 143 from 1200processing trial 291 from 1200processing trial 447 from 1200processing trial 603 from 1200processing trial 760 from 1200processing trial 916 from 1200processing trial 1041 from 1200processing trial 1133 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+preprocessing
+preprocessing trial 4 from 1043preprocessing trial 103 from 1043preprocessing trial 239 from 1043preprocessing trial 377 from 1043preprocessing trial 516 from 1043preprocessing trial 656 from 1043preprocessing trial 796 from 1043preprocessing trial 936 from 1043preprocessing trial 1043 from 1043
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 2 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 4 MB
+preprocessing
+preprocessing trial 19 from 1043preprocessing trial 50 from 1043preprocessing trial 85 from 1043preprocessing trial 119 from 1043preprocessing trial 154 from 1043preprocessing trial 190 from 1043preprocessing trial 225 from 1043preprocessing trial 258 from 1043preprocessing trial 291 from 1043preprocessing trial 326 from 1043preprocessing trial 360 from 1043preprocessing trial 393 from 1043preprocessing trial 425 from 1043preprocessing trial 460 from 1043preprocessing trial 491 from 1043preprocessing trial 527 from 1043preprocessing trial 562 from 1043preprocessing trial 597 from 1043preprocessing trial 633 from 1043preprocessing trial 667 from 1043preprocessing trial 701 from 1043preprocessing trial 738 from 1043preprocessing trial 772 from 1043preprocessing trial 804 from 1043preprocessing trial 836 from 1043preprocessing trial 867 from 1043preprocessing trial 899 from 1043preprocessing trial 931 from 1043preprocessing trial 961 from 1043preprocessing trial 993 from 1043preprocessing trial 1015 from 1043preprocessing trial 1034 from 1043preprocessing trial 1043 from 1043
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 5 MB
+the input is raw data with 66 channels and 1043 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 3 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1043 trials ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_17.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/7q/Jv/MD5E-s9126--93ddb4196a7695711a122b3027170858.out/MD5E-s9126--93ddb4196a7695711a122b3027170858.out

code/a7_prep_data_for_analysis/logs/eegmp_final_17.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-017
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 543 MB
+baseline correcting data 
+scaling data with 1 over 113.734056
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1550 MB
+removing 14 components
+keeping 57 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 143 from 1200processing trial 290 from 1200processing trial 446 from 1200processing trial 602 from 1200processing trial 757 from 1200processing trial 910 from 1200processing trial 1042 from 1200processing trial 1134 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 7 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 3 MB
+preprocessing
+preprocessing trial 4 from 1006preprocessing trial 103 from 1006preprocessing trial 241 from 1006preprocessing trial 380 from 1006preprocessing trial 520 from 1006preprocessing trial 660 from 1006preprocessing trial 800 from 1006preprocessing trial 939 from 1006preprocessing trial 1006 from 1006
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 23 from 1006preprocessing trial 47 from 1006preprocessing trial 75 from 1006preprocessing trial 110 from 1006preprocessing trial 144 from 1006preprocessing trial 177 from 1006preprocessing trial 209 from 1006preprocessing trial 244 from 1006preprocessing trial 279 from 1006preprocessing trial 311 from 1006preprocessing trial 345 from 1006preprocessing trial 377 from 1006preprocessing trial 410 from 1006preprocessing trial 446 from 1006preprocessing trial 482 from 1006preprocessing trial 517 from 1006preprocessing trial 551 from 1006preprocessing trial 586 from 1006preprocessing trial 619 from 1006preprocessing trial 655 from 1006preprocessing trial 690 from 1006preprocessing trial 721 from 1006preprocessing trial 753 from 1006preprocessing trial 785 from 1006preprocessing trial 817 from 1006preprocessing trial 849 from 1006preprocessing trial 881 from 1006preprocessing trial 912 from 1006preprocessing trial 943 from 1006preprocessing trial 975 from 1006preprocessing trial 1004 from 1006preprocessing trial 1006 from 1006
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 3 MB
+the input is raw data with 66 channels and 1006 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 3 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1006 trials ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 2 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_18.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/Mk/zP/MD5E-s9068--7fc43610e839493dd3a9d9a4babb5e41.out/MD5E-s9068--7fc43610e839493dd3a9d9a4babb5e41.out

code/a7_prep_data_for_analysis/logs/eegmp_final_18.out

@@ -0,0 +1,114 @@
+------------------------------------------
+Setting up environment variables
+---
+LD_LIBRARY_PATH is .:/opt/matlab/R2016b/runtime/glnxa64:/opt/matlab/R2016b/bin/glnxa64:/opt/matlab/R2016b/sys/os/glnxa64:/opt/matlab/R2016b/sys/opengl/lib/glnxa64
+processing ID sub-018
+the input is raw data with 72 channels and 1200 trials
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 784
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/getdimord.m' at line 734
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/private/makessense.m' at line 41
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_datatype_raw.m' at line 90
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/utilities/ft_checkdata.m' at line 277
+ In '/mnt/beegfs/home/kosciessa/.mcrCache9.1/a7_pre1/mnt/beegfs/home/kosciessa/eegmp/eegmp_preproc/tools/fieldtrip/ft_componentanalysis.m' at line 185
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+Warning: could not determine dimord of "chanlocs" in:
+
+         hdr: [1x1 struct]
+     fsample: 500
+       trial: {1x1200 cell}
+        time: {1x1200 cell}
+       label: {72x1 cell}
+         cfg: [1x1 struct]
+        elec: [1x1 struct]
+    chanlocs: [1x72 struct]
+
+
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 438 MB
+baseline correcting data 
+scaling data with 1 over 201.461359
+not concatenating data
+starting decomposition using predetermined unmixing matrix
+also applying the unmixing matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_componentanalysis" took 6 seconds and required the additional allocation of an estimated 1451 MB
+removing 11 components
+keeping 60 components
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+processing trials
+processing trial 145 from 1200processing trial 289 from 1200processing trial 445 from 1200processing trial 604 from 1200processing trial 762 from 1200processing trial 922 from 1200processing trial 1036 from 1200processing trial 1138 from 1200processing trial 1200 from 1200
+also applying the backprojection matrix to the elec structure
+Warning: copying input chantype to montage
+Warning: copying input chanunit to montage
+the call to "ft_rejectcomponent" took 3 seconds and required the additional allocation of an estimated 6 MB
+Warning: sampleinfo in the configuration is inconsistent with the actual data
+Warning: reconstructing sampleinfo by assuming that the trials are consecutive segments of a continuous recording
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 1 MB
+preprocessing
+preprocessing trial 2 from 1016preprocessing trial 89 from 1016preprocessing trial 222 from 1016preprocessing trial 357 from 1016preprocessing trial 495 from 1016preprocessing trial 634 from 1016preprocessing trial 773 from 1016preprocessing trial 913 from 1016preprocessing trial 1016 from 1016
+the call to "ft_preprocessing" took 1 seconds and required the additional allocation of an estimated 4 MB
+the call to "ft_selectdata" took 1 seconds and required the additional allocation of an estimated 2 MB
+preprocessing
+preprocessing trial 19 from 1016preprocessing trial 46 from 1016preprocessing trial 79 from 1016preprocessing trial 115 from 1016preprocessing trial 148 from 1016preprocessing trial 184 from 1016preprocessing trial 219 from 1016preprocessing trial 254 from 1016preprocessing trial 289 from 1016preprocessing trial 322 from 1016preprocessing trial 354 from 1016preprocessing trial 387 from 1016preprocessing trial 419 from 1016preprocessing trial 450 from 1016preprocessing trial 482 from 1016preprocessing trial 513 from 1016preprocessing trial 545 from 1016preprocessing trial 576 from 1016preprocessing trial 611 from 1016preprocessing trial 647 from 1016preprocessing trial 684 from 1016preprocessing trial 720 from 1016preprocessing trial 756 from 1016preprocessing trial 793 from 1016preprocessing trial 831 from 1016preprocessing trial 868 from 1016preprocessing trial 905 from 1016preprocessing trial 941 from 1016preprocessing trial 978 from 1016preprocessing trial 1010 from 1016preprocessing trial 1016 from 1016
+the call to "ft_preprocessing" took 4 seconds and required the additional allocation of an estimated 4 MB
+the input is raw data with 66 channels and 1016 trials
+the call to "ft_selectdata" took 0 seconds and required the additional allocation of an estimated 0 MB
+assuming that the data is EEG, use cfg.senstype to overrule this
+Your data and configuration allow for multiple sensor definitions.
+Warning: using electrodes specified in the configuration\n
+There are 4 bad channels
+There are 0 missing channels
+Spherical spline and surface Laplacian interpolation will treat bad and missing channels the same. Missing channels will be concatenated at the end of your data structure.
+Checking spherical fit... perfect spherical fit (residual: 0.0%)
+computing weight matrix... done!
+
+interpolating channels for 1016 trials ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+the call to "ft_channelrepair" took 3 seconds and required the additional allocation of an estimated 3 MB

code/a7_prep_data_for_analysis/logs/eegmp_final_19.out

@@ -1 +0,0 @@
-../../../.git/annex/objects/zW/6z/MD5E-s8970--d710556fc1c42a90e77ebecb19596405.out/MD5E-s8970--d710556fc1c42a90e77ebecb19596405.out