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+{
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+ "cells": [
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "# 書き戻しの準備をする\n",
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+ "\n",
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+ "このノートブックでは、ワークフロー実行結果をginリポジトリに書き戻すための準備を行います。 \n",
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+ "上から順番にセルを実行してください。"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 0. SSH秘密鍵を.ssh/id_rsaに配置する\n",
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+ "\n",
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+ "プロトタイプではSSH秘密鍵をjupyterhubの.ssh/id_rsa、公開鍵をginリポジトリに登録することでSSH接続するため、初めにSSH秘密鍵を.ssh/id_rsaに配置してください。"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 1. バージョン管理システムdataladを使用するために、このリポジトリをdatalad datasetとして認識させる"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%sh\n",
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+ "cd\n",
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+ "datalad create --force"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 2. dataladでワークフロー実行結果をginリポジトリに反映させるために、ginリポジトリをリモートリポジトリとして登録する"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%sh\n",
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+ "mkdir ./tmp\n",
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+ "git remote show origin > ./tmp/remote.txt"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "with open('./tmp/remote.txt', 'r') as f:\n",
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+ " lines = [s.strip() for s in f.readlines()]\n",
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+ " ssh_push_url = lines[2].replace('Push URL: http://dg02.dg.rcos.nii.ac.jp/', 'ssh://root@dg02.dg.rcos.nii.ac.jp:3001/') "
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "from datalad import api\n",
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+ "\n",
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+ "try:\n",
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+ " api.siblings(action='add', name='gin', url=ssh_push_url)\n",
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+ "except:\n",
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+ " pass"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 3. SSH接続で書き戻しを行うためにssh鍵に権限を与える(ssh鍵は.sshディレクトリの中にid_rsaとして保存する)"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%sh\n",
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+ "cd\n",
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+ "chmod 600 /home/jovyan/.ssh/id_rsa"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 4. .gitconfigにユーザー名とメールアドレスを登録する"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ " 1. 以下のセルでgitアカウントのユーザー名とメールアドレスを入力してください。"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": 1,
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+ "metadata": {},
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+ "outputs": [
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+ {
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+ "name": "stdout",
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+ "output_type": "stream",
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+ "text": [
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+ "ivis-mizuguchi\n"
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+ ]
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+ }
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+ ],
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+ "source": [
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+ "name = input()"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": 2,
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+ "metadata": {},
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+ "outputs": [
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+ {
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+ "name": "stdout",
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+ "output_type": "stream",
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+ "text": [
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+ "rino.mizuguchi@ivis.co.jp\n"
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+ ]
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+ }
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+ ],
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+ "source": [
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+ "email = input()"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ " 2. 入力されたユーザー名とメールアドレスを.gitconfigに登録する"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "import os\n",
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+ "\n",
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+ "os.system(\"git config --global user.name \" + name)\n",
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+ "os.system(\"git config --global user.email \" + email)"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 5. .gitignoreで.local配下をgit管理しない設定にする"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%sh\n",
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+ "cd\n",
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+ "echo \".local/*\" >> .gitignore"
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+ ]
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+ },
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+ {
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+ "cell_type": "markdown",
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+ "metadata": {},
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+ "source": [
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+ "## 6. SSH鍵の利用確認をオフにする"
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+ ]
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+ },
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+ {
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+ "cell_type": "code",
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+ "execution_count": null,
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+ "metadata": {},
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+ "outputs": [],
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+ "source": [
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+ "%%sh\n",
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+ "cd\n",
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+ "echo \"host *\\n\\tStrictHostKeyChecking no\\n\\tUserKnownHostsFile /dev/null\" >> .ssh/config"
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+ ]
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+ }
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+ ],
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+ "metadata": {
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+ "kernelspec": {
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+ "display_name": "Python 3",
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+ "language": "python",
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+ "name": "python3"
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+ },
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+ "language_info": {
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+ "codemirror_mode": {
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+ "name": "ipython",
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+ "version": 3
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+ },
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+ "file_extension": ".py",
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+ "mimetype": "text/x-python",
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+ "name": "python",
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+ "nbconvert_exporter": "python",
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+ "pygments_lexer": "ipython3",
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+ "version": "3.7.8"
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+ }
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+ },
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+ "nbformat": 4,
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+ "nbformat_minor": 4
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+}
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