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hongweilibran
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motum
DOI
10.12751/g-node.tvzqc5
2
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Branch: synced/master
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motum
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derivatives
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sub-0021
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t2_radiomics.csv

t2_radiomics.csv 14 KB
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1234 
  1. Image,Mask,diagnostics_Versions_PyRadiomics,diagnostics_Versions_Numpy,diagnostics_Versions_SimpleITK,diagnostics_Versions_PyWavelet,diagnostics_Versions_Python,diagnostics_Configuration_Settings,diagnostics_Configuration_EnabledImageTypes,diagnostics_Image-original_Hash,diagnostics_Image-original_Dimensionality,diagnostics_Image-original_Spacing,diagnostics_Image-original_Size,diagnostics_Image-original_Mean,diagnostics_Image-original_Minimum,diagnostics_Image-original_Maximum,diagnostics_Mask-original_Hash,diagnostics_Mask-original_Spacing,diagnostics_Mask-original_Size,diagnostics_Mask-original_BoundingBox,diagnostics_Mask-original_VoxelNum,diagnostics_Mask-original_VolumeNum,diagnostics_Mask-original_CenterOfMassIndex,diagnostics_Mask-original_CenterOfMass,original_shape_Elongation,original_shape_Flatness,original_shape_LeastAxisLength,original_shape_MajorAxisLength,original_shape_Maximum2DDiameterColumn,original_shape_Maximum2DDiameterRow,original_shape_Maximum2DDiameterSlice,original_shape_Maximum3DDiameter,original_shape_MeshVolume,original_shape_MinorAxisLength,original_shape_Sphericity,original_shape_SurfaceArea,original_shape_SurfaceVolumeRatio,original_shape_VoxelVolume,original_firstorder_10Percentile,original_firstorder_90Percentile,original_firstorder_Energy,original_firstorder_Entropy,original_firstorder_InterquartileRange,original_firstorder_Kurtosis,original_firstorder_Maximum,original_firstorder_MeanAbsoluteDeviation,original_firstorder_Mean,original_firstorder_Median,original_firstorder_Minimum,original_firstorder_Range,original_firstorder_RobustMeanAbsoluteDeviation,original_firstorder_RootMeanSquared,original_firstorder_Skewness,original_firstorder_TotalEnergy,original_firstorder_Uniformity,original_firstorder_Variance,original_glcm_Autocorrelation,original_glcm_ClusterProminence,original_glcm_ClusterShade,original_glcm_ClusterTendency,original_glcm_Contrast,original_glcm_Correlation,original_glcm_DifferenceAverage,original_glcm_DifferenceEntropy,original_glcm_DifferenceVariance,original_glcm_Id,original_glcm_Idm,original_glcm_Idmn,original_glcm_Idn,original_glcm_Imc1,original_glcm_Imc2,original_glcm_InverseVariance,original_glcm_JointAverage,original_glcm_JointEnergy,original_glcm_JointEntropy,original_glcm_MCC,original_glcm_MaximumProbability,original_glcm_SumAverage,original_glcm_SumEntropy,original_glcm_SumSquares,original_gldm_DependenceEntropy,original_gldm_DependenceNonUniformity,original_gldm_DependenceNonUniformityNormalized,original_gldm_DependenceVariance,original_gldm_GrayLevelNonUniformity,original_gldm_GrayLevelVariance,original_gldm_HighGrayLevelEmphasis,original_gldm_LargeDependenceEmphasis,original_gldm_LargeDependenceHighGrayLevelEmphasis,original_gldm_LargeDependenceLowGrayLevelEmphasis,original_gldm_LowGrayLevelEmphasis,original_gldm_SmallDependenceEmphasis,original_gldm_SmallDependenceHighGrayLevelEmphasis,original_gldm_SmallDependenceLowGrayLevelEmphasis,original_glrlm_GrayLevelNonUniformity,original_glrlm_GrayLevelNonUniformityNormalized,original_glrlm_GrayLevelVariance,original_glrlm_HighGrayLevelRunEmphasis,original_glrlm_LongRunEmphasis,original_glrlm_LongRunHighGrayLevelEmphasis,original_glrlm_LongRunLowGrayLevelEmphasis,original_glrlm_LowGrayLevelRunEmphasis,original_glrlm_RunEntropy,original_glrlm_RunLengthNonUniformity,original_glrlm_RunLengthNonUniformityNormalized,original_glrlm_RunPercentage,original_glrlm_RunVariance,original_glrlm_ShortRunEmphasis,original_glrlm_ShortRunHighGrayLevelEmphasis,original_glrlm_ShortRunLowGrayLevelEmphasis,original_glszm_GrayLevelNonUniformity,original_glszm_GrayLevelNonUniformityNormalized,original_glszm_GrayLevelVariance,original_glszm_HighGrayLevelZoneEmphasis,original_glszm_LargeAreaEmphasis,original_glszm_LargeAreaHighGrayLevelEmphasis,original_glszm_LargeAreaLowGrayLevelEmphasis,original_glszm_LowGrayLevelZoneEmphasis,original_glszm_SizeZoneNonUniformity,original_glszm_SizeZoneNonUniformityNormalized,original_glszm_SmallAreaEmphasis,original_glszm_SmallAreaHighGrayLevelEmphasis,original_glszm_SmallAreaLowGrayLevelEmphasis,original_glszm_ZoneEntropy,original_glszm_ZonePercentage,original_glszm_ZoneVariance,original_ngtdm_Busyness,original_ngtdm_Coarseness,original_ngtdm_Complexity,original_ngtdm_Contrast,original_ngtdm_Strength
    2. 

  2. /hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/022-Glioma-AYEY/t2.nii.gz,/hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/022-Glioma-AYEY/flair_seg_label1.nii.gz,v3.0.1,1.19.5,2.1.1.2,1.1.1,3.6.9,"{'minimumROIDimensions': 2, 'minimumROISize': None, 'normalize': False, 'normalizeScale': 1, 'removeOutliers': None, 'resampledPixelSpacing': None, 'interpolator': 'sitkBSpline', 'preCrop': False, 'padDistance': 5, 'distances': [1], 'force2D': False, 'force2Ddimension': 0, 'resegmentRange': None, 'label': 1, 'additionalInfo': True}",{'Original': {}},210843ecd531a405ffe985c4d80f65f68ad664b8,3D,"(0.6875, 0.6875, 6.499942779541016)","(320, 320, 24)",88.586845703125,-368.0,1553.0,d83b24b02dd51cce3da6e6c42dfa57728a6ffcaa,"(0.6875, 0.6875, 6.499942779541016)","(320, 320, 24)","(58, 90, 7, 98, 156, 13)",72831,2,"(104.29046697148192, 170.92393348986008, 12.254493278960883)","(-32.93383253354773, 34.38463047110399, 23.579985110165104)",0.690639753803902,0.5049194039075743,50.96836041027256,100.94355656730185,91.29189060383328,119.90088612105498,107.44593480560351,129.3311190305912,223569.3616212035,69.71563305573162,0.5367489137091536,33188.51404789627,0.1484484001172218,223754.2079757303,354.0,1047.0,36363960571.0,5.180386604261306,417.0,1.9835394321615125,1314.0,218.70700229007565,658.7396987546512,608.0,-70.0,1384.0,172.87540235319776,706.6062143430817,0.3160239358452499,111718762565.73149,0.03038941819334388,65354.35143289247,1048.4738966402028,250503.57622602594,1764.3623313540725,359.63063985840836,55.3507487058707,0.7340034526257526,4.951320975390858,3.67758429340529,26.461396591390614,0.35411760755382377,0.28087990624570597,0.9838002098924119,0.9255004045345423,-0.17653489802934624,0.8369769546881239,0.2588895431163162,31.176004213452092,0.002601384331120338,9.433376012355565,0.7627958665612974,0.011723268337475216,62.35200842690422,6.081696158265056,103.74534714106977,8.232674133765423,9506.751863904106,0.13053166733814045,7.903275864367695,2213.2917164394285,104.63665555632906,996.8412763795636,24.992283505650068,33777.57730911288,0.030204713999390724,0.0017856023235419778,0.22326208637402625,186.95241863801195,0.0005168199234223248,1945.442431723399,0.03037586766161338,101.00947314584697,965.4171144459435,1.6028784928248305,1717.225590727315,0.0026553205686219153,0.0018457203947688005,5.737880451999133,52696.62706469788,0.8102506456416074,0.8794659501501367,0.26042806242733535,0.9146416211951582,865.4777615000835,0.0017237366475232692,581.5809275779908,0.03222590611059959,82.12186041048092,807.2968914501025,1082.091483349033,2075115.4359727378,0.6667904738862763,0.002383175165955646,6297.958164791932,0.3489753512933968,0.6131869755891421,496.74204852634307,0.0015415944990075198,7.505273045752324,0.2477928354684132,1065.8051803862436,4.5941830535144215,0.00013661794556459628,4521.2670808281555,0.23231688785574756,0.16540632865818583
    3. 

  3. Image,Mask,diagnostics_Versions_PyRadiomics,diagnostics_Versions_Numpy,diagnostics_Versions_SimpleITK,diagnostics_Versions_PyWavelet,diagnostics_Versions_Python,diagnostics_Configuration_Settings,diagnostics_Configuration_EnabledImageTypes,diagnostics_Image-original_Hash,diagnostics_Image-original_Dimensionality,diagnostics_Image-original_Spacing,diagnostics_Image-original_Size,diagnostics_Image-original_Mean,diagnostics_Image-original_Minimum,diagnostics_Image-original_Maximum,diagnostics_Mask-original_Hash,diagnostics_Mask-original_Spacing,diagnostics_Mask-original_Size,diagnostics_Mask-original_BoundingBox,diagnostics_Mask-original_VoxelNum,diagnostics_Mask-original_VolumeNum,diagnostics_Mask-original_CenterOfMassIndex,diagnostics_Mask-original_CenterOfMass,original_shape_Elongation,original_shape_Flatness,original_shape_LeastAxisLength,original_shape_MajorAxisLength,original_shape_Maximum2DDiameterColumn,original_shape_Maximum2DDiameterRow,original_shape_Maximum2DDiameterSlice,original_shape_Maximum3DDiameter,original_shape_MeshVolume,original_shape_MinorAxisLength,original_shape_Sphericity,original_shape_SurfaceArea,original_shape_SurfaceVolumeRatio,original_shape_VoxelVolume,original_firstorder_10Percentile,original_firstorder_90Percentile,original_firstorder_Energy,original_firstorder_Entropy,original_firstorder_InterquartileRange,original_firstorder_Kurtosis,original_firstorder_Maximum,original_firstorder_MeanAbsoluteDeviation,original_firstorder_Mean,original_firstorder_Median,original_firstorder_Minimum,original_firstorder_Range,original_firstorder_RobustMeanAbsoluteDeviation,original_firstorder_RootMeanSquared,original_firstorder_Skewness,original_firstorder_TotalEnergy,original_firstorder_Uniformity,original_firstorder_Variance,original_glcm_Autocorrelation,original_glcm_ClusterProminence,original_glcm_ClusterShade,original_glcm_ClusterTendency,original_glcm_Contrast,original_glcm_Correlation,original_glcm_DifferenceAverage,original_glcm_DifferenceEntropy,original_glcm_DifferenceVariance,original_glcm_Id,original_glcm_Idm,original_glcm_Idmn,original_glcm_Idn,original_glcm_Imc1,original_glcm_Imc2,original_glcm_InverseVariance,original_glcm_JointAverage,original_glcm_JointEnergy,original_glcm_JointEntropy,original_glcm_MCC,original_glcm_MaximumProbability,original_glcm_SumAverage,original_glcm_SumEntropy,original_glcm_SumSquares,original_gldm_DependenceEntropy,original_gldm_DependenceNonUniformity,original_gldm_DependenceNonUniformityNormalized,original_gldm_DependenceVariance,original_gldm_GrayLevelNonUniformity,original_gldm_GrayLevelVariance,original_gldm_HighGrayLevelEmphasis,original_gldm_LargeDependenceEmphasis,original_gldm_LargeDependenceHighGrayLevelEmphasis,original_gldm_LargeDependenceLowGrayLevelEmphasis,original_gldm_LowGrayLevelEmphasis,original_gldm_SmallDependenceEmphasis,original_gldm_SmallDependenceHighGrayLevelEmphasis,original_gldm_SmallDependenceLowGrayLevelEmphasis,original_glrlm_GrayLevelNonUniformity,original_glrlm_GrayLevelNonUniformityNormalized,original_glrlm_GrayLevelVariance,original_glrlm_HighGrayLevelRunEmphasis,original_glrlm_LongRunEmphasis,original_glrlm_LongRunHighGrayLevelEmphasis,original_glrlm_LongRunLowGrayLevelEmphasis,original_glrlm_LowGrayLevelRunEmphasis,original_glrlm_RunEntropy,original_glrlm_RunLengthNonUniformity,original_glrlm_RunLengthNonUniformityNormalized,original_glrlm_RunPercentage,original_glrlm_RunVariance,original_glrlm_ShortRunEmphasis,original_glrlm_ShortRunHighGrayLevelEmphasis,original_glrlm_ShortRunLowGrayLevelEmphasis,original_glszm_GrayLevelNonUniformity,original_glszm_GrayLevelNonUniformityNormalized,original_glszm_GrayLevelVariance,original_glszm_HighGrayLevelZoneEmphasis,original_glszm_LargeAreaEmphasis,original_glszm_LargeAreaHighGrayLevelEmphasis,original_glszm_LargeAreaLowGrayLevelEmphasis,original_glszm_LowGrayLevelZoneEmphasis,original_glszm_SizeZoneNonUniformity,original_glszm_SizeZoneNonUniformityNormalized,original_glszm_SmallAreaEmphasis,original_glszm_SmallAreaHighGrayLevelEmphasis,original_glszm_SmallAreaLowGrayLevelEmphasis,original_glszm_ZoneEntropy,original_glszm_ZonePercentage,original_glszm_ZoneVariance,original_ngtdm_Busyness,original_ngtdm_Coarseness,original_ngtdm_Complexity,original_ngtdm_Contrast,original_ngtdm_Strength
    4. 

  4. /hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/022-Glioma-AYEY/t2.nii.gz,/hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/022-Glioma-AYEY/flair_seg_label1.nii.gz,v3.0.1,1.19.5,2.1.1.2,1.1.1,3.6.9,"{'minimumROIDimensions': 2, 'minimumROISize': None, 'normalize': False, 'normalizeScale': 1, 'removeOutliers': None, 'resampledPixelSpacing': None, 'interpolator': 'sitkBSpline', 'preCrop': False, 'padDistance': 5, 'distances': [1], 'force2D': False, 'force2Ddimension': 0, 'resegmentRange': None, 'label': 1, 'additionalInfo': True}",{'Original': {}},210843ecd531a405ffe985c4d80f65f68ad664b8,3D,"(0.6875, 0.6875, 6.499942779541016)","(320, 320, 24)",88.586845703125,-368.0,1553.0,d83b24b02dd51cce3da6e6c42dfa57728a6ffcaa,"(0.6875, 0.6875, 6.499942779541016)","(320, 320, 24)","(58, 90, 7, 98, 156, 13)",72831,2,"(104.29046697148192, 170.92393348986008, 12.254493278960883)","(-32.93382281232127, 34.384623401502466, 23.579988366384256)",0.690639753803902,0.5049194039075743,50.96836041027256,100.94355656730185,91.29189060383328,119.90088612105498,107.44593480560351,129.3311190305912,223569.3616212035,69.71563305573162,0.5367489137091536,33188.51404789627,0.1484484001172218,223754.2079757303,354.0,1047.0,36363960571.0,5.180386604261306,417.0,1.9835394321615125,1314.0,218.70700229007565,658.7396987546512,608.0,-70.0,1384.0,172.87540235319776,706.6062143430817,0.3160239358452499,111718762565.73149,0.03038941819334388,65354.35143289247,1048.4738966402028,250503.57622602594,1764.3623313540725,359.63063985840836,55.3507487058707,0.7340034526257526,4.951320975390858,3.67758429340529,26.461396591390614,0.35411760755382377,0.28087990624570597,0.9838002098924119,0.9255004045345423,-0.17653489802934624,0.8369769546881239,0.2588895431163162,31.176004213452092,0.002601384331120338,9.433376012355565,0.7627958665612974,0.011723268337475216,62.35200842690422,6.081696158265056,103.74534714106977,8.232674133765423,9506.751863904106,0.13053166733814045,7.903275864367695,2213.2917164394285,104.63665555632906,996.8412763795636,24.992283505650068,33777.57730911288,0.030204713999390724,0.0017856023235419778,0.22326208637402625,186.95241863801195,0.0005168199234223248,1945.442431723399,0.03037586766161338,101.00947314584697,965.4171144459435,1.6028784928248305,1717.225590727315,0.0026553205686219153,0.0018457203947688005,5.737880451999133,52696.62706469788,0.8102506456416074,0.8794659501501367,0.26042806242733535,0.9146416211951582,865.4777615000835,0.0017237366475232692,581.5809275779908,0.03222590611059959,82.12186041048092,807.2968914501025,1082.091483349033,2075115.4359727378,0.6667904738862763,0.002383175165955646,6297.958164791932,0.3489753512933968,0.6131869755891421,496.74204852634307,0.0015415944990075198,7.505273045752324,0.2477928354684132,1065.8051803862436,4.5941830535144215,0.00013661794556459628,4521.2670808281555,0.23231688785574756,0.16540632865818583
    5.