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hongweilibran
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motum
DOI
10.12751/g-node.tvzqc5
2
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motum
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derivatives
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sub-0004
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t2_radiomics.csv

t2_radiomics.csv 14 KB
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1234 
  1. Image,Mask,diagnostics_Versions_PyRadiomics,diagnostics_Versions_Numpy,diagnostics_Versions_SimpleITK,diagnostics_Versions_PyWavelet,diagnostics_Versions_Python,diagnostics_Configuration_Settings,diagnostics_Configuration_EnabledImageTypes,diagnostics_Image-original_Hash,diagnostics_Image-original_Dimensionality,diagnostics_Image-original_Spacing,diagnostics_Image-original_Size,diagnostics_Image-original_Mean,diagnostics_Image-original_Minimum,diagnostics_Image-original_Maximum,diagnostics_Mask-original_Hash,diagnostics_Mask-original_Spacing,diagnostics_Mask-original_Size,diagnostics_Mask-original_BoundingBox,diagnostics_Mask-original_VoxelNum,diagnostics_Mask-original_VolumeNum,diagnostics_Mask-original_CenterOfMassIndex,diagnostics_Mask-original_CenterOfMass,original_shape_Elongation,original_shape_Flatness,original_shape_LeastAxisLength,original_shape_MajorAxisLength,original_shape_Maximum2DDiameterColumn,original_shape_Maximum2DDiameterRow,original_shape_Maximum2DDiameterSlice,original_shape_Maximum3DDiameter,original_shape_MeshVolume,original_shape_MinorAxisLength,original_shape_Sphericity,original_shape_SurfaceArea,original_shape_SurfaceVolumeRatio,original_shape_VoxelVolume,original_firstorder_10Percentile,original_firstorder_90Percentile,original_firstorder_Energy,original_firstorder_Entropy,original_firstorder_InterquartileRange,original_firstorder_Kurtosis,original_firstorder_Maximum,original_firstorder_MeanAbsoluteDeviation,original_firstorder_Mean,original_firstorder_Median,original_firstorder_Minimum,original_firstorder_Range,original_firstorder_RobustMeanAbsoluteDeviation,original_firstorder_RootMeanSquared,original_firstorder_Skewness,original_firstorder_TotalEnergy,original_firstorder_Uniformity,original_firstorder_Variance,original_glcm_Autocorrelation,original_glcm_ClusterProminence,original_glcm_ClusterShade,original_glcm_ClusterTendency,original_glcm_Contrast,original_glcm_Correlation,original_glcm_DifferenceAverage,original_glcm_DifferenceEntropy,original_glcm_DifferenceVariance,original_glcm_Id,original_glcm_Idm,original_glcm_Idmn,original_glcm_Idn,original_glcm_Imc1,original_glcm_Imc2,original_glcm_InverseVariance,original_glcm_JointAverage,original_glcm_JointEnergy,original_glcm_JointEntropy,original_glcm_MCC,original_glcm_MaximumProbability,original_glcm_SumAverage,original_glcm_SumEntropy,original_glcm_SumSquares,original_gldm_DependenceEntropy,original_gldm_DependenceNonUniformity,original_gldm_DependenceNonUniformityNormalized,original_gldm_DependenceVariance,original_gldm_GrayLevelNonUniformity,original_gldm_GrayLevelVariance,original_gldm_HighGrayLevelEmphasis,original_gldm_LargeDependenceEmphasis,original_gldm_LargeDependenceHighGrayLevelEmphasis,original_gldm_LargeDependenceLowGrayLevelEmphasis,original_gldm_LowGrayLevelEmphasis,original_gldm_SmallDependenceEmphasis,original_gldm_SmallDependenceHighGrayLevelEmphasis,original_gldm_SmallDependenceLowGrayLevelEmphasis,original_glrlm_GrayLevelNonUniformity,original_glrlm_GrayLevelNonUniformityNormalized,original_glrlm_GrayLevelVariance,original_glrlm_HighGrayLevelRunEmphasis,original_glrlm_LongRunEmphasis,original_glrlm_LongRunHighGrayLevelEmphasis,original_glrlm_LongRunLowGrayLevelEmphasis,original_glrlm_LowGrayLevelRunEmphasis,original_glrlm_RunEntropy,original_glrlm_RunLengthNonUniformity,original_glrlm_RunLengthNonUniformityNormalized,original_glrlm_RunPercentage,original_glrlm_RunVariance,original_glrlm_ShortRunEmphasis,original_glrlm_ShortRunHighGrayLevelEmphasis,original_glrlm_ShortRunLowGrayLevelEmphasis,original_glszm_GrayLevelNonUniformity,original_glszm_GrayLevelNonUniformityNormalized,original_glszm_GrayLevelVariance,original_glszm_HighGrayLevelZoneEmphasis,original_glszm_LargeAreaEmphasis,original_glszm_LargeAreaHighGrayLevelEmphasis,original_glszm_LargeAreaLowGrayLevelEmphasis,original_glszm_LowGrayLevelZoneEmphasis,original_glszm_SizeZoneNonUniformity,original_glszm_SizeZoneNonUniformityNormalized,original_glszm_SmallAreaEmphasis,original_glszm_SmallAreaHighGrayLevelEmphasis,original_glszm_SmallAreaLowGrayLevelEmphasis,original_glszm_ZoneEntropy,original_glszm_ZonePercentage,original_glszm_ZoneVariance,original_ngtdm_Busyness,original_ngtdm_Coarseness,original_ngtdm_Complexity,original_ngtdm_Contrast,original_ngtdm_Strength
    2. 

  2. /hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/004-Glioma-AYEY/t2.nii.gz,/hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/004-Glioma-AYEY/flair_seg_label1.nii.gz,v3.0.1,1.19.5,2.1.1.2,1.1.1,3.6.9,"{'minimumROIDimensions': 2, 'minimumROISize': None, 'normalize': False, 'normalizeScale': 1, 'removeOutliers': None, 'resampledPixelSpacing': None, 'interpolator': 'sitkBSpline', 'preCrop': False, 'padDistance': 5, 'distances': [1], 'force2D': False, 'force2Ddimension': 0, 'resegmentRange': None, 'label': 1, 'additionalInfo': True}",{'Original': {}},18f433f1b91bde75c984b2ae25fb93e034bd9310,3D,"(0.75, 0.75, 6.250000476837158)","(260, 320, 21)",99.33983917124542,-361.0,1742.0,7d6b8d56b1f4678ea78cbc34362be7ae854d90da,"(0.75, 0.75, 6.250000476837158)","(260, 320, 21)","(90, 72, 6, 78, 85, 8)",22131,1,"(126.62938864036872, 119.00334372599521, 9.223803714246984)","(-11.87848610432681, 11.570584712639032, -14.711223675559069)",0.9514462210878403,0.807291936706238,43.910453780366076,54.39228584336085,60.717584385778906,65.69294174694444,67.52083011930466,71.4199733643708,77541.80279096961,51.751334821995314,0.6422059049158041,13693.057312134877,0.17658935979406384,77804.30281099677,390.0,898.0,9937145198.0,5.046530155635693,267.0,3.989944307648285,1722.0,162.03291051041467,636.7226966698297,628.0,-64.0,1786.0,110.96617167369776,670.085620958471,0.5394875033842315,34935278752.068794,0.03619091221027996,43598.946960799905,902.6980263237249,138321.50347213395,1059.0042072931362,188.7465322935466,70.7315895896055,0.4464767225656938,5.903085855315629,3.9495764893698553,31.543510034585093,0.28763133757151915,0.20320772982860624,0.9872844643198929,0.9290834873216341,-0.0975735366407867,0.6528073831706294,0.2035105793744263,29.548370016612676,0.0022060660351072427,9.532832558935525,0.4997516623305608,0.006364021187022421,59.09674003322538,5.775352598574994,64.86953047078808,7.5197983544284215,4350.520762731011,0.19658039685197284,2.8581225687445335,800.941078125706,69.7984830576201,910.2796529754643,11.049704035063938,9283.357869052461,0.03321751367185816,0.002059579187710117,0.33160364043848267,332.0397089860613,0.000599402915298374,733.9909649597213,0.035722443311135985,71.06471242599538,915.5283580404864,1.271259934581204,1141.1571235155627,0.0030446778548396023,0.002013681485597389,5.436606067198901,18031.142999388634,0.8735793025880287,0.9283810040215082,0.10054285350010908,0.9468935864146577,870.1100208867035,0.0019109431085381203,261.1006859667481,0.03035701499438996,91.90912056810585,991.3860016277177,31.059295430763864,26897.92431112661,0.08238029563126256,0.0018812594663654074,3285.401581211487,0.3819790235102299,0.641832903887289,668.4281813385709,0.001117861232142095,7.316113231555621,0.3886403687135692,24.438591289767775,0.9948594950505351,0.0003927416133705177,8766.984362131521,0.11538027598798907,0.8375416861153734
    3. 

  3. Image,Mask,diagnostics_Versions_PyRadiomics,diagnostics_Versions_Numpy,diagnostics_Versions_SimpleITK,diagnostics_Versions_PyWavelet,diagnostics_Versions_Python,diagnostics_Configuration_Settings,diagnostics_Configuration_EnabledImageTypes,diagnostics_Image-original_Hash,diagnostics_Image-original_Dimensionality,diagnostics_Image-original_Spacing,diagnostics_Image-original_Size,diagnostics_Image-original_Mean,diagnostics_Image-original_Minimum,diagnostics_Image-original_Maximum,diagnostics_Mask-original_Hash,diagnostics_Mask-original_Spacing,diagnostics_Mask-original_Size,diagnostics_Mask-original_BoundingBox,diagnostics_Mask-original_VoxelNum,diagnostics_Mask-original_VolumeNum,diagnostics_Mask-original_CenterOfMassIndex,diagnostics_Mask-original_CenterOfMass,original_shape_Elongation,original_shape_Flatness,original_shape_LeastAxisLength,original_shape_MajorAxisLength,original_shape_Maximum2DDiameterColumn,original_shape_Maximum2DDiameterRow,original_shape_Maximum2DDiameterSlice,original_shape_Maximum3DDiameter,original_shape_MeshVolume,original_shape_MinorAxisLength,original_shape_Sphericity,original_shape_SurfaceArea,original_shape_SurfaceVolumeRatio,original_shape_VoxelVolume,original_firstorder_10Percentile,original_firstorder_90Percentile,original_firstorder_Energy,original_firstorder_Entropy,original_firstorder_InterquartileRange,original_firstorder_Kurtosis,original_firstorder_Maximum,original_firstorder_MeanAbsoluteDeviation,original_firstorder_Mean,original_firstorder_Median,original_firstorder_Minimum,original_firstorder_Range,original_firstorder_RobustMeanAbsoluteDeviation,original_firstorder_RootMeanSquared,original_firstorder_Skewness,original_firstorder_TotalEnergy,original_firstorder_Uniformity,original_firstorder_Variance,original_glcm_Autocorrelation,original_glcm_ClusterProminence,original_glcm_ClusterShade,original_glcm_ClusterTendency,original_glcm_Contrast,original_glcm_Correlation,original_glcm_DifferenceAverage,original_glcm_DifferenceEntropy,original_glcm_DifferenceVariance,original_glcm_Id,original_glcm_Idm,original_glcm_Idmn,original_glcm_Idn,original_glcm_Imc1,original_glcm_Imc2,original_glcm_InverseVariance,original_glcm_JointAverage,original_glcm_JointEnergy,original_glcm_JointEntropy,original_glcm_MCC,original_glcm_MaximumProbability,original_glcm_SumAverage,original_glcm_SumEntropy,original_glcm_SumSquares,original_gldm_DependenceEntropy,original_gldm_DependenceNonUniformity,original_gldm_DependenceNonUniformityNormalized,original_gldm_DependenceVariance,original_gldm_GrayLevelNonUniformity,original_gldm_GrayLevelVariance,original_gldm_HighGrayLevelEmphasis,original_gldm_LargeDependenceEmphasis,original_gldm_LargeDependenceHighGrayLevelEmphasis,original_gldm_LargeDependenceLowGrayLevelEmphasis,original_gldm_LowGrayLevelEmphasis,original_gldm_SmallDependenceEmphasis,original_gldm_SmallDependenceHighGrayLevelEmphasis,original_gldm_SmallDependenceLowGrayLevelEmphasis,original_glrlm_GrayLevelNonUniformity,original_glrlm_GrayLevelNonUniformityNormalized,original_glrlm_GrayLevelVariance,original_glrlm_HighGrayLevelRunEmphasis,original_glrlm_LongRunEmphasis,original_glrlm_LongRunHighGrayLevelEmphasis,original_glrlm_LongRunLowGrayLevelEmphasis,original_glrlm_LowGrayLevelRunEmphasis,original_glrlm_RunEntropy,original_glrlm_RunLengthNonUniformity,original_glrlm_RunLengthNonUniformityNormalized,original_glrlm_RunPercentage,original_glrlm_RunVariance,original_glrlm_ShortRunEmphasis,original_glrlm_ShortRunHighGrayLevelEmphasis,original_glrlm_ShortRunLowGrayLevelEmphasis,original_glszm_GrayLevelNonUniformity,original_glszm_GrayLevelNonUniformityNormalized,original_glszm_GrayLevelVariance,original_glszm_HighGrayLevelZoneEmphasis,original_glszm_LargeAreaEmphasis,original_glszm_LargeAreaHighGrayLevelEmphasis,original_glszm_LargeAreaLowGrayLevelEmphasis,original_glszm_LowGrayLevelZoneEmphasis,original_glszm_SizeZoneNonUniformity,original_glszm_SizeZoneNonUniformityNormalized,original_glszm_SmallAreaEmphasis,original_glszm_SmallAreaHighGrayLevelEmphasis,original_glszm_SmallAreaLowGrayLevelEmphasis,original_glszm_ZoneEntropy,original_glszm_ZonePercentage,original_glszm_ZoneVariance,original_ngtdm_Busyness,original_ngtdm_Coarseness,original_ngtdm_Complexity,original_ngtdm_Contrast,original_ngtdm_Strength
    4. 

  4. /hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/004-Glioma-AYEY/t2.nii.gz,/hdd3/bran/data/SD_glioma/submitted_data/MOTUM-v.2.2/004-Glioma-AYEY/flair_seg_label1.nii.gz,v3.0.1,1.19.5,2.1.1.2,1.1.1,3.6.9,"{'minimumROIDimensions': 2, 'minimumROISize': None, 'normalize': False, 'normalizeScale': 1, 'removeOutliers': None, 'resampledPixelSpacing': None, 'interpolator': 'sitkBSpline', 'preCrop': False, 'padDistance': 5, 'distances': [1], 'force2D': False, 'force2Ddimension': 0, 'resegmentRange': None, 'label': 1, 'additionalInfo': True}",{'Original': {}},18f433f1b91bde75c984b2ae25fb93e034bd9310,3D,"(0.75, 0.75, 6.250000476837158)","(260, 320, 21)",99.33983917124542,-361.0,1742.0,7d6b8d56b1f4678ea78cbc34362be7ae854d90da,"(0.75, 0.75, 6.250000476837158)","(260, 320, 21)","(90, 72, 6, 78, 85, 8)",22131,1,"(126.62938864036872, 119.00334372599521, 9.223803714246984)","(-11.87848575546397, 11.57058395254677, -14.711219949605969)",0.9514462210878403,0.807291936706238,43.910453780366076,54.39228584336085,60.717584385778906,65.69294174694444,67.52083011930466,71.4199733643708,77541.80279096961,51.751334821995314,0.6422059049158041,13693.057312134877,0.17658935979406384,77804.30281099677,390.0,898.0,9937145198.0,5.046530155635693,267.0,3.989944307648285,1722.0,162.03291051041467,636.7226966698297,628.0,-64.0,1786.0,110.96617167369776,670.085620958471,0.5394875033842315,34935278752.068794,0.03619091221027996,43598.946960799905,902.6980263237249,138321.50347213395,1059.0042072931362,188.7465322935466,70.7315895896055,0.4464767225656938,5.903085855315629,3.9495764893698553,31.543510034585093,0.28763133757151915,0.20320772982860624,0.9872844643198929,0.9290834873216341,-0.0975735366407867,0.6528073831706294,0.2035105793744263,29.548370016612676,0.0022060660351072427,9.532832558935525,0.4997516623305608,0.006364021187022421,59.09674003322538,5.775352598574994,64.86953047078808,7.5197983544284215,4350.520762731011,0.19658039685197284,2.8581225687445335,800.941078125706,69.7984830576201,910.2796529754643,11.049704035063938,9283.357869052461,0.03321751367185816,0.002059579187710117,0.33160364043848267,332.0397089860613,0.000599402915298374,733.9909649597213,0.035722443311135985,71.06471242599538,915.5283580404864,1.271259934581204,1141.1571235155627,0.0030446778548396023,0.002013681485597389,5.436606067198901,18031.142999388634,0.8735793025880287,0.9283810040215082,0.10054285350010908,0.9468935864146577,870.1100208867035,0.0019109431085381203,261.1006859667481,0.03035701499438996,91.90912056810585,991.3860016277177,31.059295430763864,26897.92431112661,0.08238029563126256,0.0018812594663654074,3285.401581211487,0.3819790235102299,0.641832903887289,668.4281813385709,0.001117861232142095,7.316113231555621,0.3886403687135692,24.438591289767775,0.9948594950505351,0.0003927416133705177,8766.984362131521,0.11538027598798907,0.8375416861153734
    5.