SEB3R_Validation_Data/README.md

SEB3R Validation Dataset

About

This repo contains all data used for the validation of MATLAB pipeline: Whisker Nuisance test 3D for Rodents. The script are available here.

Note: this dataset was generated through DeepLabCut and SEB3R! Original video tracking files are released in a separate dataset.

Usage

• Download and setup SEB3R
• When launching any script, use one of the subfolders WN-HH, WN-MH, or Open Field group under WiN3R results. All results will be generates within the same subfolder.

Structure

• WiN3R: specific dataset groups. Note that they have already been processed with the SEB3R pipeline.

  • Open Field group: mice placed in open field for 15 minutes, divided into 5 3-minute sessions. Used as control.
  • WN-MH: mild habituation group.
  • WN-HH: heavy abituation group.
  • Cohort WNt3R validation.xlsx: summary of the subjects identifiers used in each experimental condition.

• Analyzed Data: a number of statistical tests on the aforementioned datasets performed with GraphPad Prims8 and provided as XLSX file.