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- <ngaus>[1 1 2 3 4 2]</ngaus>
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- <species>human</species>
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- <shootingsurf>Template_T1</shootingsurf>
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- <darteltpm>
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- </darteltpm>
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- </shootingtpm>
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- </shootingT1>
- <brainmask>
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- </brainmask>
- <T1>
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- </T1>
- <cat12atlas>
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- </cat12atlas>
- <pbtres>0.5</pbtres>
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- <verb>2</verb>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii</td>
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- <td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii</td>
- <td>0</td>
- <td>
- <item>csf</item>
- <item>gm</item>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii</td>
- <td>0</td>
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- <td>[false]</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii</td>
- <td>1</td>
- <td>
- <item>gm</item>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii</td>
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- <td>
- <item>gm</item>
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- <td>[false]</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii</td>
- <td>1</td>
- <td>
- <item>gm</item>
- <item>wm</item>
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- <td>[false]</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii</td>
- <td>1</td>
- <td>
- <item>gm</item>
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- <td>[false]</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii</td>
- <td>1</td>
- <td>
- <item>gm</item>
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- <td>[false]</td>
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- <tr>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii</td>
- <td>1</td>
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- <item>gm</item>
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- <td>[false]</td>
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- <td>1</td>
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- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot</td>
- <td>0</td>
- <td>1</td>
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- <td>Destrieux</td>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot</td>
- <td>0</td>
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- <td>HCP</td>
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- <td>0</td>
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- <td>Schaefer2018_100P_17N</td>
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- <td>1</td>
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- <td>Schaefer2018_200P_17N</td>
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- <td>0</td>
- <td>0</td>
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- <td>Schaefer2018_400P_17N</td>
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- <td>1</td>
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- <td>Schaefer2018_600P_17N</td>
- <td>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot</td>
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- <td>0</td>
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- <res_BB>0</res_BB>
- <tissue_mn>[11.3719997406006 71.5774002075195 145.883575439453 241.574249267578]</tissue_mn>
- <tissue_mnr>[0.0470745526254177 0.296295642852783 0.60388708114624 1]</tissue_mnr>
- <tissue_weighting>T1</tissue_weighting>
- <tissue_std>[17.4987627663896 28.9902114459053 29.4792480516246 20.0956304487794]</tissue_std>
- <tissue_stdr>[0.0760147348046303 0.125933662056923 0.128058031201363 0.0872955396771431]</tissue_stdr>
- <contrast>84.5986175537109</contrast>
- <contrastr>0.350197166204453</contrastr>
- <NCR>0.143040969967842</NCR>
- <ICR>0.502366006374359</ICR>
- </qualitymeasures>
- <qualityratings>
- <res_vx_vol>[1.80000305175781 1.875 1.875]</res_vx_vol>
- <res_RMS>1.8503387965755</res_RMS>
- <res_BB>0.5</res_BB>
- <tissue_mn>[8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641]</tissue_mn>
- <tissue_std>[8.624 8.624 8.624 8.624]</tissue_std>
- <contrast>0.5</contrast>
- <contrastr>2.83037567138672</contrastr>
- <NCR>2.38445258140564</NCR>
- <ICR>1.70576894283295</ICR>
- <SurfaceEulerNumber>2.83673469387755</SurfaceEulerNumber>
- <SurfaceDefectArea>1.24151835626925</SurfaceDefectArea>
- <SurfaceDefectNumber>2.05</SurfaceDefectNumber>
- <SurfaceIntensityRMSE>1.52487540245056</SurfaceIntensityRMSE>
- <SurfacePositionRMSE>1.51908826828003</SurfacePositionRMSE>
- <IQR>2.22057984665066</IQR>
- </qualityratings>
- <ratings_help>
- <qualitymeasures>
- <res_vx_vol>voxel dimensions</res_vx_vol>
- <res_RMS>RMS error of voxel size</res_RMS>
- <res_BB>brain next to the image boundary</res_BB>
- <tissue_mn>mean within the tissue classes</tissue_mn>
- <tissue_std>standard deviation within the tissue classes</tissue_std>
- <contrast>contrast between tissue classes</contrast>
- <contrastr>contrast between tissue classes</contrastr>
- <NCR>noise to contrast ratio</NCR>
- <ICR>inhomogeneity to contrast ratio</ICR>
- <SurfaceEulerNumber>average Euler number (characteristic)</SurfaceEulerNumber>
- <SurfaceDefectArea>average area of topological defects</SurfaceDefectArea>
- <SurfaceDefectNumber>average number of defects</SurfaceDefectNumber>
- <SurfaceIntensityRMSE>RMSE of the expected boundary intensity Ym of the IS, OS, and CS</SurfaceIntensityRMSE>
- <SurfacePositionRMSE>RMSE of the expected boundary position Ypp of the IS, OS, and CS</SurfacePositionRMSE>
- <SurfaceSelfIntersections>Percentual area of self-intersections of the IS and OS.</SurfaceSelfIntersections>
- </qualitymeasures>
- <subjectmeasures>
- <vol_TIV>total intracranial volume (GM+WM+VT)</vol_TIV>
- <vol_rel_CGW>relative tissue volume (CSF,GM,WM)</vol_rel_CGW>
- <vol_rel_WMH>relative WMH volume</vol_rel_WMH>
- <surf_TSA>total surface area</surf_TSA>
- </subjectmeasures>
- </ratings_help>
- <software>
- <version_segment>1639</version_segment>
- <system>LINUX</system>
- <version_spm>7771</version_spm>
- <version_matlab>9.3</version_matlab>
- <version_cat>12.8.1</version_cat>
- <revision_cat>1980</revision_cat>
- <function>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m</function>
- <markdefs>/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m</markdefs>
- <qamethod>cat12</qamethod>
- <date>20220709-192851</date>
- </software>
- <subjectmeasures>
- <software>
- <version_segment>1639</version_segment>
- </software>
- <qualitymeasures>
- <software>
- <version_segment>1639</version_segment>
- </software>
- <SurfaceEulerNumber>38</SurfaceEulerNumber>
- <SurfaceDefectArea>0.966073425076989</SurfaceDefectArea>
- <SurfaceDefectNumber>21</SurfaceDefectNumber>
- <SurfaceIntensityRMSE>0.0762437731027603</SurfaceIntensityRMSE>
- <SurfacePositionRMSE>0.0759544149041176</SurfacePositionRMSE>
- </qualitymeasures>
- <EC_abs>38</EC_abs>
- <defect_size>0.966073425076989</defect_size>
- <vol_abs_CGW>[195.130546820514 681.788839281131 503.268476182485 0 0]</vol_abs_CGW>
- <vol_abs_WMH>0.93978399222388</vol_abs_WMH>
- <vol_rel_WMH>0.000680910199187371</vol_rel_WMH>
- <surf_TSA>1866.30200637169</surf_TSA>
- <vol_TIV>1380.18786228413</vol_TIV>
- <vol_rel_CGW>[0.14137970065726 0.493982636648326 0.364637662694414 0 0]</vol_rel_CGW>
- <dist_thickness>
- <item>[2.53816189813161 0.642733315451747]</item>
- </dist_thickness>
- <dist_thickness_kmeans>[2.54457402229309 0.763241062344778 1]</dist_thickness_kmeans>
- <dist_thickness_kmeans_inner3>[1.88915241554587 0.266466925817312 0.281364481019379;2.5472579523456 0.186476939282378 0.424940270772498;3.22875653618516 0.271919141229471 0.293695248208123]</dist_thickness_kmeans_inner3>
- <dist_thickness_kmeans_outer2>[0.843737656616263 0.317919025278792 0.590909090909091;4.14969153467673 0.340553000120967 0.409090909090909]</dist_thickness_kmeans_outer2>
- </subjectmeasures>
- <subjectratings>
- <vol_TIV>1.00934607483272</vol_TIV>
- <vol_rel_CGW>[0.5 6.72167091681619 4.39866491908071 0.5 0.5]</vol_rel_CGW>
- <vol_rel_WMH>1.06809101991874</vol_rel_WMH>
- <surf_TSA>8.60724257109421</surf_TSA>
- <SQR>5.51952524882994</SQR>
- </subjectratings>
- <ppe>
- <affreg>
- <skullstrippedpara>[0.128495152791341 1 1 10842.9330903366 0.510462468861388]</skullstrippedpara>
- <skullstripped>[false]</skullstripped>
- <highBGpara>[0.045300018042326 0.0442426800727844 0.261930257081985]</highBGpara>
- <highBG>[false]</highBG>
- </affreg>
- <SPMvols0>[821.035287563371 463.954123337961 406.040504814684 3122.44796389166 2465.34149998229 6020.81892471734]</SPMvols0>
- <SPMvols1>[691.804938064077 434.04496222042 219.493193134578 3726.08086505918 2140.46907005165 5229.85850546882]</SPMvols1>
- <tths>
- <gintnorm>
- <T3th>[77.2117004394531 158.479400634766 231.917205810547]</T3th>
- <Tth>
- <T3th>[0 5.83503723144531 12.2062139511108 77.2117004394531 158.479400634766 231.917205810547 309.269958496094 978.039428710938]</T3th>
- <T3thx>[0 0.02 0.05 1 2 3 4 5]</T3thx>
- </Tth>
- </gintnorm>
- </tths>
- <reginitp>
- <opt>
- <nits>16</nits>
- <vxreg>1.5</vxreg>
- <rres>3</rres>
- <stepsize>0.5</stepsize>
- <resfac>[1 1 1 1 1]</resfac>
- <ll1th>0.015</ll1th>
- <ll3th>[0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03]</ll3th>
- <regstr>15</regstr>
- </opt>
- <fast>0</fast>
- <clsn>2</clsn>
- <regra>1</regra>
- <testfolder>Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0</testfolder>
- <dtc>[0.0233422890305519 0.0845224186778069 0.0936076119542122 0 0]</dtc>
- <ll>[0.0864617148128783 0 0.0864617148128783 0;0.192652414969894 0.0109571660695528 0.203609581039447 2336.59375;0.192652414969894 0.0109571660695528 0.203609581039447 2336.59375]</ll>
- <rmsdtc>[0.0487602315843105 0.108514457941055 0.119362339377403]</rmsdtc>
- <rmsgdt>[0.03434057533741 0.0468780510127544 0.0576689578592777]</rmsgdt>
- <rmsdt>0.119362339377403</rmsdt>
- <dt>0.0936076119542122</dt>
- </reginitp>
- <reg>
- <opt>
- <nits>64</nits>
- <vxreg>1.5</vxreg>
- <rres>1.5</rres>
- <stepsize>0.25</stepsize>
- <resfac>[1.66666666666667 1.5 1.33333333333333 1.16666666666667 1]</resfac>
- <ll1th>0.051</ll1th>
- <ll3th>[0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501]</ll3th>
- <regstr>0.5</regstr>
- </opt>
- <fast>0</fast>
- <clsn>2</clsn>
- <regra>1</regra>
- <testfolder>Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5</testfolder>
- <dtc>[0.010898289270699 0.0412050560116768 0.0575994811952114 0.0647661760449409 0.0691028982400894 0.077332429587841]</dtc>
- <ll>[0.0863878301430597 0 0.0863878301430597 0;0.217722313797314 0.0162802617521368 0.234002575549451 8333.458984375;0.193525522188042 0.0172698148269725 0.210795337015014 12429.29296875;0.175029990113812 0.0177812983847072 0.192811288498519 19173.076171875;0.163050192699815 0.018345771533104 0.181395964232919 32093.23046875;0.163050192699815 0.018345771533104 0.181395964232919 32093.23046875]</ll>
- <rmsdtc>[0.012611199170351 0.046699196100235 0.068072222173214 0.0912459939718246 0.111960336565971 0.116509862244129]</rmsdtc>
- <rmsgdt>[0.00350564927794039 0.0134797636419535 0.0277012158185244 0.0465949475765228 0.0644786655902863 0.0688857585191727]</rmsgdt>
- <rmsdt>0.116509862244129</rmsdt>
- <dt>0.077332429587841</dt>
- </reg>
- </ppe>
- <catlog>
- <item>------------------------------------------------------------------------</item>
- <item>CAT12.8.1 r1980: 1/1: ./dir_26212/ds/sub-0261/sub-0261_ses-01_T1w.n</item>
- <item>------------------------------------------------------------------------</item>
- <item>SANLM denoising (medium): 77s</item>
- <item>APP: Rough bias correction:</item>
- <item>Initialize 8s</item>
- <item>Estimate background 8s</item>
- <item>Initial correction 16s</item>
- <item>Refine background 4s</item>
- <item>Final correction 8s</item>
- <item>Final scaling 7s</item>
- <item>60s</item>
- <item>Correct center-of-mass 4s</item>
- <item>Affine registration 21s</item>
- <item>SPM preprocessing 1 (estimate 1 - TPM registration): 90s</item>
- <item>SPM preprocessing 1 (estimate 2): 79s</item>
- <item>SPM preprocessing 2 (write):</item>
- <item>Write Segmentation 20s</item>
- <item>Update Segmentation 23s</item>
- <item>Update Skull-Stripping 50s</item>
- <item>Update probability maps 11s</item>
- <item>104s</item>
- <item>Global intensity correction: 21s</item>
- <item>SANLM denoising after intensity normalization (medium): 13s</item>
- <item>Fast Optimized Shooting registration 34s</item>
- <item>Local adaptive segmentation (LASstr=0.50):</item>
- <item>Prepare maps 5s</item>
- <item>Prepare partitions 3s</item>
- <item>Prepare segments (LASmod = 1.00) 16s</item>
- <item>Estimate local tissue thresholds (WM) 22s</item>
- <item>Estimate local tissue thresholds (GM) 30s</item>
- <item>Intensity transformation 0s</item>
- <item>SANLM denoising after LAS (medium) 43s</item>
- <item>123s</item>
- <item>ROI segmentation (partitioning):</item>
- <item>Atlas -> subject space 9s</item>
- <item>Major structures 4s</item>
- <item>Ventricle detection 18s</item>
- <item>Blood vessel detection 11s</item>
- <item>WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 33s</item>
- <item>Manual stroke lesion detection 0s</item>
- <item>Closing of deep structures 2s</item>
- <item>Side alignment 4s</item>
- <item>Final corrections 5s</item>
- <item>86s</item>
- <item>Blood vessel correction (BVCstr=0.50): 2s</item>
- <item>Amap using initial SPM12 segmentations (MRF filter strength 0.05): 36s</item>
- <item>AMAP peaks: [CSF,GM,WM] = [0.36 0.06,0.68 0.08,0.98 0.05]</item>
- <item>Final cleanup (gcutstr=0.25):</item>
- <item>Level 1 cleanup (ROI estimation) 5s</item>
- <item>Level 1 cleanup (brain masking) 3s</item>
- <item>Level 2 cleanup (CSF correction) 2s</item>
- <item>Level 3 cleanup (CSF/WM PVE) 3s</item>
- <item>13s</item>
- <item>Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50):</item>
- <item>Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii"</item>
- <item>1 | 2.50 | 0.0864 0.0000 0.0864 | 32.0000</item>
- <item>2 | 2.50 | 0.0825 0.0015 0.0840 | 29.4886</item>
- <item>3 | 2.50 | 0.0814 0.0023 0.0837 | 26.9772</item>
- <item>4 | 2.50 | 0.0809 0.0026 0.0835 | 24.6107</item>
- <item>5 | 2.50 | 0.0804 0.0028 0.0832 | 22.6548</item>
- <item>6 | 2.50 | 0.0801 0.0029 0.0830 | 20.6989</item>
- <item>7 | 2.50 | 0.0797 0.0030 0.0827 | 18.9688</item>
- <item>8 | 2.50 | 0.0793 0.0031 0.0824 | 17.4455</item>
- <item>9 | 2.50 | 0.0789 0.0032 0.0821 | 15.9223</item>
- <item>10 | 2.50 | 0.0785 0.0033 0.0818 | 14.6627</item>
- <item>11 | 2.50 | 0.0781 0.0034 0.0815 | 13.4764</item>
- <item>12 | 2.50 | 0.0777 0.0035 0.0812 | 12.3015</item>
- <item>13 | 2.50 | 0.0772 0.0036 0.0808 | 11.3776</item>
- <item>14 | 2.50 | 0.0768 0.0037 0.0805 | 10.4537</item>
- <item>15 | 2.25 | 0.0759 0.0038 0.0797 | 9.5920</item>
- <item>16 | 2.25 | 0.0726 0.0054 0.0780 | 8.8725</item>
- <item>29 | 2.00 | 0.0725 0.0024 0.0749 | 3.3283</item>
- <item>30 | 2.00 | 0.0665 0.0048 0.0713 | 3.1221</item>
- <item>31 | 2.00 | 0.0645 0.0058 0.0703 | 2.9160</item>
- <item>43 | 1.75 | 0.0632 0.0033 0.0665 | 1.5785</item>
- <item>44 | 1.75 | 0.0595 0.0053 0.0648 | 1.5194</item>
- <item>45 | 1.75 | 0.0583 0.0059 0.0643 | 1.4626</item>
- <item>57 | 1.50 | 0.0571 0.0043 0.0614 | 1.0900</item>
- <item>58 | 1.50 | 0.0544 0.0061 0.0605 | 1.0730</item>
- <item>Shooting registration with 2.50:-0.25:1.50 mm takes: 135s</item>
- <item>Prepare output 11s</item>
- <item>146s</item>
- <item>Jacobian determinant (RMS): 0.013 0.047 0.068 0.091 0.112 | 0.116510</item>
- <item>Template Matching: 0.086 0.218 0.194 0.175 0.163 | 0.163050</item>
- <item>Write result maps: 29s</item>
- <item>Surface and thickness estimation:</item>
- <item>lh:</item>
- <item>Thickness estimation (0.50 mm ):</item>
- <item>WM distance: 27s</item>
- <item>CSF distance: 14s</item>
- <item>PBT2x thickness: 42s</item>
- <item>89s</item>
- <item>Create initial surface 78s</item>
- <item>Topology correction: 87s</item>
- <item>Surface refinement: 97s</item>
- <item>Reduction of surface collisions with optimization: 63s</item>
- <item>Spherical mapping with areal smoothing 85s</item>
- <item>Spherical registration 286s</item>
- <item>rh:</item>
- <item>Thickness estimation (0.50 mm ):</item>
- <item>WM distance: 31s</item>
- <item>CSF distance: 14s</item>
- <item>PBT2x thickness: 41s</item>
- <item>91s</item>
- <item>Create initial surface 78s</item>
- <item>Topology correction: 85s</item>
- <item>Surface refinement: 68s</item>
- <item>Reduction of surface collisions with optimization: 63s</item>
- <item>Spherical mapping with areal smoothing 75s</item>
- <item>Spherical registration 280s</item>
- <item>Final surface processing results:</item>
- <item>Average thickness (FS): 2.5382 0.6425 mm</item>
- <item>Surface intensity / position RMSE: 0.0762 / 0.0760</item>
- <item>Euler number / defect number / defect size: 38.0 / 21.0 / 0.97%</item>
- <item>Display thickness: /var/lib/condor/execute/dir_26212/ds/sub-0261/surf/lh.thickness.sub-0261_ses-01_T1w</item>
- <item>Display thickness: /var/lib/condor/execute/dir_26212/ds/sub-0261/surf/rh.thickness.sub-0261_ses-01_T1w</item>
- <item>Show surfaces in orthview: /var/lib/condor/execute/dir_26212/ds/sub-0261/sub-0261_ses-01_T1w.nii</item>
- <item>Surface ROI estimation: 7s</item>
- <item>Surface and thickness estimation takes: 1619s</item>
- <item>ROI estimation in native space:</item>
- <item>ROI estimation of 'cobra' atlas 10s</item>
- <item>ROI estimation of 'neuromorphometrics' atlas 37s</item>
- <item>ROI estimation of 'lpba40' atlas 11s</item>
- <item>ROI estimation of 'hammers' atlas 26s</item>
- <item>ROI estimation of 'thalamus' atlas 2s</item>
- <item>ROI estimation of 'ibsr' atlas 9s</item>
- <item>ROI estimation of 'aal3' atlas 15s</item>
- <item>ROI estimation of 'mori' atlas 23s</item>
- <item>ROI estimation of 'anatomy3' atlas 33s</item>
- <item>ROI estimation of 'julichbrain' atlas 43s</item>
- <item>ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 17s</item>
- <item>ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 31s</item>
- <item>ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 70s</item>
- <item>ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 105s</item>
- <item>Write results 106s</item>
- <item>434s</item>
- <item>Quality check: 6s</item>
- <item>Print 'Graphics' figure to:</item>
- <item>/var/lib/condor/execute/dir_26212/ds/sub-0261/report/catreport_sub-0261_ses-01_T1w.pdf</item>
- <item>------------------------------------------------------------------------</item>
- <item>CAT preprocessing takes 51 minute(s) and 53 second(s).</item>
- <item>Image Quality Rating (IQR): 82.79% (B-)</item>
- <item>GM volume (GMV): 49.40% (681.79 / 1380.19 ml)</item>
- <item>GM thickness (GMT): 2.54 0.64 mm</item>
- <item>Segmentations are saved in /var/lib/condor/execute/dir_26212/ds/sub-0261/mri</item>
- <item>Reports are saved in /var/lib/condor/execute/dir_26212/ds/sub-0261/report</item>
- <item>Labels are saved in /var/lib/condor/execute/dir_26212/ds/sub-0261/label</item>
- <item>------------------------------------------------------------------------</item>
- </catlog>
- </S>
|