[DATALAD RUNCMD] Compute IACAS/sub-0025481/ses-2

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.8.1_r2042.simg sh -e -u -x -c '\n        rm -rf {outputs[0]} ;\n        mkdir -p {outputs[0]}         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp_MSA.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "6c5791d8-1803-48a1-bbaa-2b5e23b5f707",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.8.1_r2042.simg"
 ],
 "inputs": [
  "inputs/CORR/IACAS/sub-0025481/ses-2/anat/sub-0025481_ses-2_run-1_T1w.nii.gz"
 ],
 "outputs": [
  "IACAS/sub-0025481/ses-2"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

IACAS/sub-0025481/ses-2/label/catROI_sub-0025481_ses-2_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/23/jQ/MD5E-s57834--2b4a3d2b39108c7a8623abbe7ab934bf.mat/MD5E-s57834--2b4a3d2b39108c7a8623abbe7ab934bf.mat

IACAS/sub-0025481/ses-2/label/catROI_sub-0025481_ses-2_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/j7/GK/MD5E-s188996--79c3ab82095f314fa4e9faaba7fc2ac8.xml/MD5E-s188996--79c3ab82095f314fa4e9faaba7fc2ac8.xml

IACAS/sub-0025481/ses-2/label/catROIs_sub-0025481_ses-2_run-1_T1w.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/zM/zz/MD5E-s120185--47eb8702b8e028925ee3613ce995fc58.mat/MD5E-s120185--47eb8702b8e028925ee3613ce995fc58.mat

IACAS/sub-0025481/ses-2/label/catROIs_sub-0025481_ses-2_run-1_T1w.xml

@@ -0,0 +1 @@
+../../../../.git/annex/objects/W7/m7/MD5E-s332140--e5504599d9717e8f0337ea3cd0ea8a06.xml/MD5E-s332140--e5504599d9717e8f0337ea3cd0ea8a06.xml

IACAS/sub-0025481/ses-2/mri/Schaefer2018_100Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/fZ/39/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv/MD5E-s6136--50f3bdd0131fed1907cdc3853421e787.csv

IACAS/sub-0025481/ses-2/mri/Schaefer2018_100Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/pf/1w/MD5E-s161660--0f018bf8fb5b5fa888fb74b70484f2e5.nii.gz/MD5E-s161660--0f018bf8fb5b5fa888fb74b70484f2e5.nii.gz

IACAS/sub-0025481/ses-2/mri/Schaefer2018_200Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/jj/fX/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv/MD5E-s12250--7714c270a22e7bfd7765b21fe4dbc773.csv

IACAS/sub-0025481/ses-2/mri/Schaefer2018_200Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/W3/K1/MD5E-s180181--ffca29d8bf20a6adb7998bbacb521769.nii.gz/MD5E-s180181--ffca29d8bf20a6adb7998bbacb521769.nii.gz

IACAS/sub-0025481/ses-2/mri/Schaefer2018_400Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Mk/2V/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv/MD5E-s24625--7f90d1d2497826b5422e2922f504392e.csv

IACAS/sub-0025481/ses-2/mri/Schaefer2018_400Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/v3/Gq/MD5E-s242462--96e27596f2b48409b39c689c2313402a.nii.gz/MD5E-s242462--96e27596f2b48409b39c689c2313402a.nii.gz

IACAS/sub-0025481/ses-2/mri/Schaefer2018_600Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/0m/PX/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv/MD5E-s30411--bd66f8658a8cab01372d71f820aff658.csv

IACAS/sub-0025481/ses-2/mri/Schaefer2018_600Parcels_17Networks_order_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/78/94/MD5E-s268754--842cda9666083840ba1d1d72803a3db3.nii.gz/MD5E-s268754--842cda9666083840ba1d1d72803a3db3.nii.gz

IACAS/sub-0025481/ses-2/mri/Tian_Subcortex_S2_7T_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/pX/V3/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv/MD5E-s433--b72d075bcae9b5ca765a39fdb70a1d86.csv

IACAS/sub-0025481/ses-2/mri/Tian_Subcortex_S2_7T_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Z6/Gv/MD5E-s25711--50a30a612493e310696d2032532cb495.nii.gz/MD5E-s25711--50a30a612493e310696d2032532cb495.nii.gz

IACAS/sub-0025481/ses-2/mri/aal3_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
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IACAS/sub-0025481/ses-2/mri/aal3_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/XV/Qz/MD5E-s181554--ba05bef4b476700f6cd45b27d5281ada.nii.gz/MD5E-s181554--ba05bef4b476700f6cd45b27d5281ada.nii.gz

IACAS/sub-0025481/ses-2/mri/anatomy3_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
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IACAS/sub-0025481/ses-2/mri/anatomy3_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/0F/Jw/MD5E-s131158--3d4423dd14d41093657d4216e823b3c5.nii.gz/MD5E-s131158--3d4423dd14d41093657d4216e823b3c5.nii.gz

IACAS/sub-0025481/ses-2/mri/anon_misub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/xZ/JV/MD5E-s7406107--981df9c01df501eb436f97f879416eac.nii.gz/MD5E-s7406107--981df9c01df501eb436f97f879416eac.nii.gz

IACAS/sub-0025481/ses-2/mri/anon_msub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/KV/mF/MD5E-s6813857--43a1822f2367f124cc16a2e2ec664c7c.nii.gz/MD5E-s6813857--43a1822f2367f124cc16a2e2ec664c7c.nii.gz

IACAS/sub-0025481/ses-2/mri/cat_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/V2/Xk/MD5E-s103415--91821f152e08d943ba64ef89bb89b8fb.nii.gz/MD5E-s103415--91821f152e08d943ba64ef89bb89b8fb.nii.gz

IACAS/sub-0025481/ses-2/mri/cobra_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Vg/p7/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv/MD5E-s2767--afc9796ffee9c6ca3ca9d3316009fbc0.csv

IACAS/sub-0025481/ses-2/mri/cobra_sub-0025481_ses-2_run-1_T1w.nii.gz

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+../../../../.git/annex/objects/G7/74/MD5E-s49676--c20c3cbb1551560559dcaa70297cad11.nii.gz/MD5E-s49676--c20c3cbb1551560559dcaa70297cad11.nii.gz

IACAS/sub-0025481/ses-2/mri/hammers_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/xF/fj/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv/MD5E-s4409--6264a8be3c78a9e6e0204fef2bfda91d.csv

IACAS/sub-0025481/ses-2/mri/hammers_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
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IACAS/sub-0025481/ses-2/mri/ibsr_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
+../../../../.git/annex/objects/kZ/MJ/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv/MD5E-s1209--212307cb94c72a881f3ff865d3846481.csv

IACAS/sub-0025481/ses-2/mri/ibsr_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/Vp/MP/MD5E-s152829--40cef8ea39428727af41866097ec78ef.nii.gz/MD5E-s152829--40cef8ea39428727af41866097ec78ef.nii.gz

IACAS/sub-0025481/ses-2/mri/it_sub-0025481_ses-2_run-1_T1w_affine_reorient.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/6j/x2/MD5E-s283--4da7a7303ecb5005adce6e349bebe350.mat/MD5E-s283--4da7a7303ecb5005adce6e349bebe350.mat

IACAS/sub-0025481/ses-2/mri/it_sub-0025481_ses-2_run-1_T1w_rigid_reorient.mat

@@ -0,0 +1 @@
+../../../../.git/annex/objects/4v/P2/MD5E-s283--af41930de63b3d683c0813a2483d3ed8.mat/MD5E-s283--af41930de63b3d683c0813a2483d3ed8.mat

IACAS/sub-0025481/ses-2/mri/iy_sub-0025481_ses-2_run-1_T1w.nii.gz

@@ -0,0 +1 @@
+../../../../.git/annex/objects/14/f7/MD5E-s45092684--9f78f56dc78a00165a8e735b2303b48f.nii.gz/MD5E-s45092684--9f78f56dc78a00165a8e735b2303b48f.nii.gz

IACAS/sub-0025481/ses-2/mri/julichbrain_sub-0025481_ses-2_run-1_T1w.csv

@@ -0,0 +1 @@
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IACAS/sub-0025481/ses-2/mri/julichbrain_sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/lpba40_sub-0025481_ses-2_run-1_T1w.csv

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IACAS/sub-0025481/ses-2/mri/lpba40_sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/m0wp1sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/m0wp2sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/m0wp3sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/mori_sub-0025481_ses-2_run-1_T1w.csv

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IACAS/sub-0025481/ses-2/mri/mori_sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/mwp1sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/mwp2sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/mwp3sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/neuromorphometrics_sub-0025481_ses-2_run-1_T1w.csv

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IACAS/sub-0025481/ses-2/mri/neuromorphometrics_sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/p0sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/p1sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/p2sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/p3sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/rp1sub-0025481_ses-2_run-1_T1w_affine.nii.gz

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IACAS/sub-0025481/ses-2/mri/rp2sub-0025481_ses-2_run-1_T1w_affine.nii.gz

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IACAS/sub-0025481/ses-2/mri/rp3sub-0025481_ses-2_run-1_T1w_affine.nii.gz

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IACAS/sub-0025481/ses-2/mri/t_sub-0025481_ses-2_run-1_T1w_affine_reorient.mat

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IACAS/sub-0025481/ses-2/mri/t_sub-0025481_ses-2_run-1_T1w_rigid_reorient.mat

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IACAS/sub-0025481/ses-2/mri/thalamus_sub-0025481_ses-2_run-1_T1w.csv

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IACAS/sub-0025481/ses-2/mri/thalamus_sub-0025481_ses-2_run-1_T1w.nii.gz

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IACAS/sub-0025481/ses-2/mri/wj_sub-0025481_ses-2_run-1_T1w.nii.gz

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