Data for "Divergence of rodent and primate medial frontal cortex functional connectivity"
Naming of files: $species: h=human m=marmoset r=rat
$cluster: c1-c4=clusters 1-4 c1-10=cluters 1-10 *For human area 24 posterior subclustering c1-7=cluters 1-7 *For marmoset LFC clustering
$rois Au1 = primary auditory cortex PPC = posterior parietal cortex S1 = primary somatosensory M1 = primary motor Amygdala = Amygdala Insula = Insula striatum = striatum 1-10 = 1-10 human area 24 posterior
Description of contained files: $species_$cluster_map: .nii.gz seed resting state maps from each of the 4 clusters, in each species
$species_$roi: .nii.gz files of individual ROIs in respective template spaces
$speciesmfc$cluster: clustering solutions for each species
$species_$cluster_24p: .nii.gz seed resting state maps from each of the 10 area 24p subclusters
$species_$roi_24p_roi: .nii.gz files of individual ROIs for each of the 10 area 24p subclusters
$speciesLFC$cluster_LFC: .nii.gz seed resting state maps from each of the 7 marmoset LFC clusters
*Marmoset LFC clustering solutions provided in previous manuscript, see https://gin.g-node.org/everling_lab_marmosets/Marmoset_LFC_funcitonal_boundaries
*To derive fingerprints and resultant cosine similarity, please use publicly available code as follows:
Extract timecourse from each roi (from RS maps): https://afni.nimh.nih.gov/pub/dist/doc/program_help/3dmaskave.html
Normalize; in matlab: e.g., r_mfc_c1 = rescale(dlmread('r_mfc_c1.txt')
Calculate cosine similarity: https://www.mathworks.com/matlabcentral/fileexchange/62978-getcosinesimilarity-x-y
Plot fingerprint: https://www.mathworks.com/matlabcentral/fileexchange/30305-spider-rader-chart-for-multi-data
*Template anatomical files available for download through respective publications:
*Please contact Dr. Yuki Hori (yhori@uwo.ca) for permutation testing code, made available upon reasonable request.