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@@ -1,3 +1,23 @@
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# RSC_HPC
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-Calcium fluorescence signals of hundreds of simultaneously imaged neurons in mouse retrosplenial cortex during a virtual navigation task, from different experimental groups of animals: control mice, mice with unilateral hippocampus lesion, and mice with bilateral hippocampus lesions.
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+Calcium fluorescence signals of hundreds of simultaneously imaged neurons in mouse retrosplenial cortex during a virtual navigation task (running on a linear treadmill track with head-fixed), from different experimental groups of animals: control mice, mice with unilateral hippocampus lesion (uni), and mice with bilateral hippocampus lesions (bi).
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+data structure explained below:
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+behavior.
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+ts: time stamp in second
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+pos_norm: normalized position (0~1, circular) for each trial
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+trial: trial number
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+speed: movement speed, in cm/s
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+speed_raw: raw running speed, extracted directly from encoder pulses
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+pos_cum: cumulative position (cm) for the entire session
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+pos_raw: raw position (cm) for each trial
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+
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+imaging:
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+
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+ratio: dF/F (%), nSamples x nCells
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+deconv: deconvolved calcium signal (%), nSamples x nCells
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+tt: time stamp in second
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+
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+avgstack: mean stack image
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