Clean up and restructuring of the publication branch. At the moment, the supplement scripts are probably not functional. The Main part should be running fine however.

.gitignore

@@ -49,5 +49,4 @@ MANIFEST
 .venv*/
 
 # Output data
-data
 logs

figures/spatial_network_perlin_map/.gitignore

@@ -0,0 +1,4 @@
+# Ignore everything in this directory
+*
+# Except this file
+!.gitignore