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- import view
- # this tells view all settings including the folder structure of your project
- ymlfile = "/home/aj/SharedWithWindows/MR_Till/usage_till.yml"
- # any manual changes to flags, add to dictionary as required
- flags_to_update = {
- # "<flag name>" : flag value
- # "CTV_scalebar": True
- # .....
- "CTV_scalebar": True,
- "mv_xgap": 30,
- "mv_ygap": 30,
- "mv_individualScale": 2,
- "mv_indiScale3factor": 0.25,
- "LE_labelColumns": ("Measu", "Label")
- }
- animals = [
- "MR_190510a_or47a",
- "MR_190510b_or47a"
- ]
- if __name__ == '__main__':
- # create a view object
- view_obj = view.VIEW()
- # load flags from yml file
- view_obj.update_flags_from_ymlfile(ymlfile)
- # update flags specified locally
- view_obj.update_flags(flags_to_update)
- # iterate over animals
- for animal in animals:
- # initialize view object with animal
- view_obj.initialize_animal(animal=animal)
- # iterate over measurements of the animal
- for measu in view_obj.get_measus_by_analyze_for_current_animal(1):
- # load a measurement for the animal
- view_obj.load_measurement_data_from_current_animal(measu)
- # save movie for the loaded data
- view_obj.export_movie_for_current_measurement()
- # backup this script and the yml file used next to the created GDMs
- view_obj.backup_script_flags_configs_for_movies(files=[__file__, ymlfile])
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